Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0358
         (476 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_54422| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.16 
SB_45635| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.16 
SB_38332| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.16 
SB_38086| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.16 
SB_35571| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.16 
SB_33894| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.16 
SB_18613| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.16 
SB_15467| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.16 
SB_5161| Best HMM Match : No HMM Matches (HMM E-Value=.)               33   0.16 
SB_2693| Best HMM Match : No HMM Matches (HMM E-Value=.)               33   0.16 
SB_46668| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.16 
SB_45616| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.16 
SB_43837| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.16 
SB_38154| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.16 
SB_29395| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.16 
SB_17833| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.16 
SB_10777| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.16 

>SB_54422| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 52

 Score = 32.7 bits (71), Expect = 0.16
 Identities = 17/28 (60%), Positives = 18/28 (64%)
 Frame = -2

Query: 295 KNYLRDNSVILFFSQIKRKVCDLDVGLR 212
           K+Y  DNSVI   S I   VCDLDV LR
Sbjct: 10  KSYHGDNSVISLESLIDNDVCDLDVELR 37


>SB_45635| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 48

 Score = 32.7 bits (71), Expect = 0.16
 Identities = 17/28 (60%), Positives = 18/28 (64%)
 Frame = -2

Query: 295 KNYLRDNSVILFFSQIKRKVCDLDVGLR 212
           K+Y  DNSVI   S I   VCDLDV LR
Sbjct: 10  KSYHGDNSVISLESLIDNDVCDLDVELR 37


>SB_38332| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 52

 Score = 32.7 bits (71), Expect = 0.16
 Identities = 17/28 (60%), Positives = 18/28 (64%)
 Frame = -2

Query: 295 KNYLRDNSVILFFSQIKRKVCDLDVGLR 212
           K+Y  DNSVI   S I   VCDLDV LR
Sbjct: 10  KSYHGDNSVISLESLIDNDVCDLDVELR 37


>SB_38086| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 52

 Score = 32.7 bits (71), Expect = 0.16
 Identities = 17/28 (60%), Positives = 18/28 (64%)
 Frame = -2

Query: 295 KNYLRDNSVILFFSQIKRKVCDLDVGLR 212
           K+Y  DNSVI   S I   VCDLDV LR
Sbjct: 10  KSYHGDNSVISLESLIDNDVCDLDVELR 37


>SB_35571| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 52

 Score = 32.7 bits (71), Expect = 0.16
 Identities = 17/28 (60%), Positives = 18/28 (64%)
 Frame = -2

Query: 295 KNYLRDNSVILFFSQIKRKVCDLDVGLR 212
           K+Y  DNSVI   S I   VCDLDV LR
Sbjct: 10  KSYHGDNSVISLESLIDNDVCDLDVELR 37


>SB_33894| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 52

 Score = 32.7 bits (71), Expect = 0.16
 Identities = 17/28 (60%), Positives = 18/28 (64%)
 Frame = -2

Query: 295 KNYLRDNSVILFFSQIKRKVCDLDVGLR 212
           K+Y  DNSVI   S I   VCDLDV LR
Sbjct: 10  KSYHGDNSVISLESLIDNDVCDLDVELR 37


>SB_18613| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 52

 Score = 32.7 bits (71), Expect = 0.16
 Identities = 17/28 (60%), Positives = 18/28 (64%)
 Frame = -2

Query: 295 KNYLRDNSVILFFSQIKRKVCDLDVGLR 212
           K+Y  DNSVI   S I   VCDLDV LR
Sbjct: 10  KSYHGDNSVISLESLIDNDVCDLDVELR 37


>SB_15467| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 48

 Score = 32.7 bits (71), Expect = 0.16
 Identities = 17/28 (60%), Positives = 18/28 (64%)
 Frame = -2

Query: 295 KNYLRDNSVILFFSQIKRKVCDLDVGLR 212
           K+Y  DNSVI   S I   VCDLDV LR
Sbjct: 10  KSYHGDNSVISLESLIDNDVCDLDVELR 37


>SB_5161| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 52

 Score = 32.7 bits (71), Expect = 0.16
 Identities = 17/28 (60%), Positives = 18/28 (64%)
 Frame = -2

Query: 295 KNYLRDNSVILFFSQIKRKVCDLDVGLR 212
           K+Y  DNSVI   S I   VCDLDV LR
Sbjct: 10  KSYHGDNSVISLESLIDNDVCDLDVELR 37


>SB_2693| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 52

 Score = 32.7 bits (71), Expect = 0.16
 Identities = 17/28 (60%), Positives = 18/28 (64%)
 Frame = -2

Query: 295 KNYLRDNSVILFFSQIKRKVCDLDVGLR 212
           K+Y  DNSVI   S I   VCDLDV LR
Sbjct: 10  KSYHGDNSVISLESLIDNDVCDLDVELR 37


>SB_46668| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 52

 Score = 32.7 bits (71), Expect = 0.16
 Identities = 17/28 (60%), Positives = 18/28 (64%)
 Frame = -2

Query: 295 KNYLRDNSVILFFSQIKRKVCDLDVGLR 212
           K+Y  DNSVI   S I   VCDLDV LR
Sbjct: 10  KSYHGDNSVISLESLIDNDVCDLDVELR 37


>SB_45616| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 46

 Score = 32.7 bits (71), Expect = 0.16
 Identities = 17/28 (60%), Positives = 18/28 (64%)
 Frame = -2

Query: 295 KNYLRDNSVILFFSQIKRKVCDLDVGLR 212
           K+Y  DNSVI   S I   VCDLDV LR
Sbjct: 10  KSYHGDNSVISLESLIDNDVCDLDVELR 37


>SB_43837| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 52

 Score = 32.7 bits (71), Expect = 0.16
 Identities = 17/28 (60%), Positives = 18/28 (64%)
 Frame = -2

Query: 295 KNYLRDNSVILFFSQIKRKVCDLDVGLR 212
           K+Y  DNSVI   S I   VCDLDV LR
Sbjct: 10  KSYHGDNSVISLESLIDNDVCDLDVELR 37


>SB_38154| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 52

 Score = 32.7 bits (71), Expect = 0.16
 Identities = 17/28 (60%), Positives = 18/28 (64%)
 Frame = -2

Query: 295 KNYLRDNSVILFFSQIKRKVCDLDVGLR 212
           K+Y  DNSVI   S I   VCDLDV LR
Sbjct: 10  KSYHGDNSVISLESLIDNDVCDLDVELR 37


>SB_29395| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 52

 Score = 32.7 bits (71), Expect = 0.16
 Identities = 17/28 (60%), Positives = 18/28 (64%)
 Frame = -2

Query: 295 KNYLRDNSVILFFSQIKRKVCDLDVGLR 212
           K+Y  DNSVI   S I   VCDLDV LR
Sbjct: 10  KSYHGDNSVISLESLIDNDVCDLDVELR 37


>SB_17833| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 40

 Score = 32.7 bits (71), Expect = 0.16
 Identities = 17/28 (60%), Positives = 18/28 (64%)
 Frame = -2

Query: 295 KNYLRDNSVILFFSQIKRKVCDLDVGLR 212
           K+Y  DNSVI   S I   VCDLDV LR
Sbjct: 10  KSYHGDNSVISLESLIDNDVCDLDVELR 37


>SB_10777| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 48

 Score = 32.7 bits (71), Expect = 0.16
 Identities = 17/28 (60%), Positives = 18/28 (64%)
 Frame = -2

Query: 295 KNYLRDNSVILFFSQIKRKVCDLDVGLR 212
           K+Y  DNSVI   S I   VCDLDV LR
Sbjct: 10  KSYHGDNSVISLESLIDNDVCDLDVELR 37


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,433,988
Number of Sequences: 59808
Number of extensions: 146327
Number of successful extensions: 179
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 179
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 989515521
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)