Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0357
(659 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0015 + 6109552-6109650,6110006-6110078,6111937-6111998,611... 37 0.012
02_05_0473 + 29319824-29322511,29322659-29322820,29324133-293242... 33 0.20
09_04_0564 + 18565583-18566449,18569662-18570123 32 0.35
08_02_1172 + 24898290-24899141,24900864-24901328 32 0.35
06_03_0743 + 24069752-24070483,24071890-24072345 31 0.81
05_01_0042 - 290077-290676,291093-291233,291675-291764,292364-29... 31 0.81
01_07_0337 + 42838260-42838344,42838972-42839084,42839652-428397... 31 1.1
05_07_0110 - 27747789-27747897,27748375-27748568,27748811-277488... 30 1.9
11_06_0685 - 26272928-26273110,26273186-26273257,26273339-262734... 29 3.3
11_06_0459 + 23830204-23830350,23830419-23830592,23830738-238308... 29 3.3
11_06_0276 - 21826458-21826640,21826716-21826787,21826869-218269... 29 3.3
05_06_0126 - 25834129-25834214,25834595-25834658,25836201-258365... 29 3.3
05_01_0088 + 581619-581854,581890-582035,583143-583263,583593-58... 29 3.3
02_04_0194 + 20820985-20821027,20822168-20822367,20822477-208225... 29 3.3
03_02_0464 - 8683232-8684596 29 4.3
09_02_0226 - 6007656-6008063,6012166-6012678 28 5.7
03_06_0217 - 32432590-32433495 28 5.7
02_05_0288 - 27549718-27549940,27550025-27550102,27550282-275506... 28 5.7
04_04_0664 - 27066253-27067155,27067242-27067508,27067707-270683... 28 7.6
03_05_0796 + 27787401-27788831 28 7.6
>02_02_0015 +
6109552-6109650,6110006-6110078,6111937-6111998,
6112315-6112376,6112463-6112556,6112673-6113227,
6113379-6113870,6113967-6114137,6115713-6115817,
6115903-6116052,6116372-6116498,6116585-6116648,
6117147-6117203,6117423-6117555,6117660-6117746
Length = 776
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +3
Query: 453 RNERVRQGLLYQRGGKRFPCKICARVYTHISNFCRHYVTSHKKDVKVFP--CPICFKEF 623
RNER+ +GLL KR C C + T+++ FC+ Y+T + ++ +P IC +F
Sbjct: 10 RNERIIRGLLKLPANKR--CINCNNLTTNVATFCQIYITRYDLGLEQWPRGTTICLYKF 66
>02_05_0473 +
29319824-29322511,29322659-29322820,29324133-29324249,
29324360-29324469,29324504-29324540,29324696-29324862,
29325002-29325089,29325163-29325270
Length = 1158
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = +3
Query: 510 CKICARVYTHISNFCRHYVTSHKKDV----KVFPCPICFKEFTRKDNMIAHLK 656
CKIC++ ++ H+ HKK+V + + C +C FT + + H++
Sbjct: 465 CKICSQEFSDDQGLGLHWTEVHKKEVRWLFRGYSCAVCMDSFTNRRVLERHVQ 517
>09_04_0564 + 18565583-18566449,18569662-18570123
Length = 442
Score = 32.3 bits (70), Expect = 0.35
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 594 FPCPICFKEFTRKDNMIAHL 653
F CP+CFK F R +NM H+
Sbjct: 273 FSCPVCFKTFNRYNNMQMHM 292
>08_02_1172 + 24898290-24899141,24900864-24901328
Length = 438
Score = 32.3 bits (70), Expect = 0.35
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 594 FPCPICFKEFTRKDNMIAHL 653
F CP+CFK F R +NM H+
Sbjct: 268 FSCPVCFKTFNRYNNMQMHM 287
>06_03_0743 + 24069752-24070483,24071890-24072345
Length = 395
Score = 31.1 bits (67), Expect = 0.81
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 594 FPCPICFKEFTRKDNMIAHL 653
F CP+C+K F R +NM H+
Sbjct: 228 FSCPVCYKTFNRYNNMQMHM 247
>05_01_0042 -
290077-290676,291093-291233,291675-291764,292364-292563,
292685-292743,292827-292942
Length = 401
Score = 31.1 bits (67), Expect = 0.81
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +3
Query: 456 NERVRQGLLYQRGGKRFPCKI--CARVYTHISNFCRHYVTSHKKDVKVFPCPICFKEFTR 629
+ ++++ L G K F C C + ++ N H T ++ V P P C K FT
Sbjct: 130 SSKLKRHHLIHTGQKDFICPHPGCGKAFSLDFNLRSHLKTHALENYHVCPFPACGKRFTS 189
Query: 630 KDNMIAHLK 656
+ +H+K
Sbjct: 190 DSKLKSHVK 198
>01_07_0337 +
42838260-42838344,42838972-42839084,42839652-42839729,
42839831-42840054,42840084-42840128,42840156-42840264
Length = 217
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +3
Query: 504 FPCKICARVYTHISNFCRHYVTSHKKDVKVFPCPICFKEFTRKDNMIAHLKI 659
FPC C + + C H H D + CP+C R +M AH ++
Sbjct: 37 FPCPFCY-IEVEVPFICNHLQEEHCFDTRNAVCPLCADNIGR--DMGAHFRV 85
>05_07_0110 -
27747789-27747897,27748375-27748568,27748811-27748888,
27749925-27750064,27750197-27750269
Length = 197
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +3
Query: 504 FPCKICARVYTHISNFCRHYVTSHKKDVKVFPCPICFKEFTRKDNMIAHLKI 659
F C C + +S C H H + PCPIC + + +M+ H+ +
Sbjct: 42 FACPYCYEDHDVVS-LCAHLEEEHPFEPHAAPCPICSDKIAK--DMLNHITV 90
>11_06_0685 -
26272928-26273110,26273186-26273257,26273339-26273425,
26273566-26273655,26273741-26273785,26273872-26274054,
26274333-26274392,26274521-26274703,26274779-26274907,
26275083-26275380,26275454-26275608,26275791-26275929,
26276015-26276096,26276167-26276285,26276367-26276494,
26276640-26276813,26276882-26277028
Length = 757
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +2
Query: 2 IKQEPNNDANDGYNEPIEYKYNPERS--RENSNSQDGP-IKDSDEK 130
+K+EP N+++D Y K ERS R S P I DSD K
Sbjct: 422 VKEEPKNESSDDYEMNNHRKTKKERSNMRSTKRSNKEPYITDSDGK 467
>11_06_0459 +
23830204-23830350,23830419-23830592,23830738-23830865,
23830947-23831065,23831136-23831217,23831303-23831441,
23831624-23831778,23831852-23832149,23832325-23832453,
23832529-23832711,23832840-23832899,23832973-23833101,
23833177-23833359,23833446-23833490,23833576-23833665,
23833806-23833892,23833974-23834045,23834120-23834302
Length = 800
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +2
Query: 2 IKQEPNNDANDGYNEPIEYKYNPERS--RENSNSQDGP-IKDSDEK 130
+K+EP N+++D Y K ERS R S P I DSD K
Sbjct: 422 VKEEPKNESSDDYEMNNHRKTKKERSNMRSTKRSNKEPYITDSDGK 467
>11_06_0276 -
21826458-21826640,21826716-21826787,21826869-21826955,
21827096-21827185,21827271-21827315,21827402-21827584,
21827660-21827788,21827862-21827921,21828050-21828232,
21828308-21828436,21828612-21828909,21828983-21829137,
21829320-21829458,21829544-21829625,21829696-21829814,
21829896-21830023,21830169-21830342,21830411-21830557
Length = 800
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +2
Query: 2 IKQEPNNDANDGYNEPIEYKYNPERS--RENSNSQDGP-IKDSDEK 130
+K+EP N+++D Y K ERS R S P I DSD K
Sbjct: 422 VKEEPKNESSDDYEMNNHRKTKKERSNMRSTKRSNKEPYITDSDGK 467
>05_06_0126 -
25834129-25834214,25834595-25834658,25836201-25836521,
25836912-25837040,25837118-25837177,25837251-25837548,
25837622-25837776,25837959-25838097,25838185-25838266,
25838337-25838455,25838537-25838664,25838810-25838983,
25839052-25839203,25839393-25839425,25840362-25841331,
25841412-25841537
Length = 1011
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 2 IKQEPNNDANDGYNEPIEYKYNPERSRENSNSQDGPIKD 118
+K+EP N+++D Y + K ERS S + + D
Sbjct: 820 VKEEPKNESSDDYEKNNHRKTKKERSNMRSTKRSKKVTD 858
>05_01_0088 +
581619-581854,581890-582035,583143-583263,583593-583773,
583842-584015,584161-584288,584370-584488,584559-584640,
584726-584864,585047-585201,585275-585572,585748-585876,
585952-586134,586263-586322,586396-586524,586600-586782,
586869-586913,586999-587088,587229-587315,587397-587468,
587813-587887
Length = 943
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +2
Query: 2 IKQEPNNDANDGYNEPIEYKYNPERS--RENSNSQDGP-IKDSDEK 130
+K+EP N+++D Y K ERS R S P I DSD K
Sbjct: 601 VKEEPKNESSDDYEMNNHRKTKKERSNMRSTKRSNKEPYITDSDGK 646
>02_04_0194 +
20820985-20821027,20822168-20822367,20822477-20822566,
20822820-20822825,20822866-20823009,20823089-20823580
Length = 324
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = +3
Query: 456 NERVRQGLLYQRGGKRFPC--KICARVYTHISNF-CRHYVTSHKKD-VKVFPCPICFKEF 623
+ ++++ L G K F C + C +V +F + ++ +H D V P C + F
Sbjct: 86 SSKLKRHFLIHTGEKNFVCPHEGCGKVLAFSLDFNLKAHMKTHSVDNYHVCKYPECARRF 145
Query: 624 TRKDNMIAHLK 656
T++ + AH+K
Sbjct: 146 TQESKLRAHIK 156
>03_02_0464 - 8683232-8684596
Length = 454
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/46 (28%), Positives = 18/46 (39%)
Frame = +3
Query: 438 RQLPRRNERVRQGLLYQRGGKRFPCKICARVYTHISNFCRHYVTSH 575
RQ+P+ R + G FPCK+C V + H H
Sbjct: 187 RQIPQATTRQSSFRSFAARGDVFPCKVCGEVLSKPQQLELHQAMKH 232
>09_02_0226 - 6007656-6008063,6012166-6012678
Length = 306
Score = 28.3 bits (60), Expect = 5.7
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 594 FPCPICFKEFTRKDNMIAHL 653
F CP+C K F+R +N+ H+
Sbjct: 155 FACPVCCKTFSRYNNLQMHM 174
>03_06_0217 - 32432590-32433495
Length = 301
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 579 KDVKVFPCPICFKEFTRKDNMIAH 650
KDV++FPC C K+F + + H
Sbjct: 44 KDVRLFPCLFCNKKFLKSQALGGH 67
>02_05_0288 -
27549718-27549940,27550025-27550102,27550282-27550674,
27550752-27551347,27552232-27552978
Length = 678
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +2
Query: 425 IWVVSAITTKKRTSPSGTIVSKRGKTFSMQNMCKGLYTH 541
+WV++ + T +S G +V +RG S Q+ C+G+ T+
Sbjct: 549 LWVMNMVPTVGNSSTLG-VVYERGLIGSYQDWCEGMSTY 586
>04_04_0664 -
27066253-27067155,27067242-27067508,27067707-27068368,
27068479-27069047,27070011-27070108
Length = 832
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 5 KQEPNNDANDGYNEPIEYKYNP-ERSRENSNSQDGPIKDS 121
++ +ND NDG E +E + N +S E S S D DS
Sbjct: 306 EENTDNDGNDGNEEHVENEENEGNKSGEGSLSSDDDSSDS 345
>03_05_0796 + 27787401-27788831
Length = 476
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +3
Query: 486 QRGGKRFPCKICARVYTHISNFCRHYVTSHKKDVK 590
+R KRF C IC R + H V HKK K
Sbjct: 241 ERASKRFVCSICGRCFGSHQALGGH-VLGHKKKAK 274
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,998,518
Number of Sequences: 37544
Number of extensions: 336735
Number of successful extensions: 942
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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