Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0357
(659 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 42 1e-05
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 38 2e-04
CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein... 32 0.018
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 31 0.024
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 26 0.92
AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-spe... 26 0.92
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 23 6.5
AF283268-1|AAG15373.1| 46|Anopheles gambiae ribosomal protein ... 23 8.5
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 42.3 bits (95), Expect = 1e-05
Identities = 21/49 (42%), Positives = 26/49 (53%)
Frame = +3
Query: 510 CKICARVYTHISNFCRHYVTSHKKDVKVFPCPICFKEFTRKDNMIAHLK 656
CK+C +V THI N HY H F CP+C +TR DN+ H K
Sbjct: 502 CKLCGKVVTHIRN---HY---HVHFPGRFECPLCRATYTRSDNLRTHCK 544
Score = 23.8 bits (49), Expect = 4.9
Identities = 9/25 (36%), Positives = 10/25 (40%)
Frame = +3
Query: 501 RFPCKICARVYTHISNFCRHYVTSH 575
RF C +C YT N H H
Sbjct: 523 RFECPLCRATYTRSDNLRTHCKFKH 547
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 38.3 bits (85), Expect = 2e-04
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +3
Query: 450 RRNERVRQGLLYQRGGKRFPCKI-CARVYTHISNFCRHYVTSHKKDVKVFPCPICFKEFT 626
RR+ + L+ + FP C + +SN H+ H+ + CP+C ++FT
Sbjct: 877 RRDHNIDYSSLFIQLTGTFPTLYSCVSCHKTVSNRW-HHANIHRP--QSHECPVCGQKFT 933
Query: 627 RKDNMIAHLKI 659
R+DNM AH K+
Sbjct: 934 RRDNMKAHCKV 944
>CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein
protein.
Length = 415
Score = 31.9 bits (69), Expect = 0.018
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 495 GKRFPCKICARVYTHISNFCRHYVTSHKKDVKVF--PCPICFKEFTRKDNMIAHLK 656
G+RF C +C Y + +H H+ + F C IC K F+++ + H++
Sbjct: 346 GQRFQCNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLHMR 401
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 31.5 bits (68), Expect = 0.024
Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 7/66 (10%)
Frame = +3
Query: 477 LLYQRGGKRFPCKICARVYTHISNFCRHYVTSHKKD-------VKVFPCPICFKEFTRKD 635
LL K + C CA+ + RH H D K CP C + F K
Sbjct: 374 LLLHTDQKPYKCDQCAQTFRQKQLLKRHMNYYHNPDYVAPTPKAKTHICPTCKRPFRHKG 433
Query: 636 NMIAHL 653
N+I H+
Sbjct: 434 NLIRHM 439
Score = 31.1 bits (67), Expect = 0.032
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = +3
Query: 462 RVRQGLLYQRGGKRFPCKICARVYTHISNFCRHYVTSHKKDVKVFPCPICFKEFTRKDNM 641
++++ + G K F C C RH + H + K + C +CF FT+ +++
Sbjct: 226 KLKRHIRTHTGEKPFQCPHCTYASPDKFKLTRH-MRIHTGE-KPYSCDVCFARFTQSNSL 283
Query: 642 IAHLKI 659
AH I
Sbjct: 284 KAHKMI 289
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 26.2 bits (55), Expect = 0.92
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +3
Query: 495 GKRFPCKICARVYTHISNFCRHYVTSHKKDVKVFPCPICFKEFTRKDNMIAHLKI 659
G + C+ C + ++N H+ H + CP C ++R D + +HL+I
Sbjct: 524 GTAWRCRSCGK---EVTNRWHHF---HSHTPQRSLCPYCPASYSRIDTLRSHLRI 572
>AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless
male-specific zinc-fingerC isoform protein.
Length = 569
Score = 26.2 bits (55), Expect = 0.92
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +3
Query: 495 GKRFPCKICARVYTHISNFCRHYVTSHKKDVKVFPCPICFKEFTRKDNMIAHLKI 659
G + C+ C + ++N H+ H + CP C ++R D + +HL+I
Sbjct: 500 GTAWRCRSCGK---EVTNRWHHF---HSHTPQRSLCPYCPASYSRIDTLRSHLRI 548
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 23.4 bits (48), Expect = 6.5
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 437 SAITTKKRTSPSGTIVSKRGKTFS 508
S+ ++ K++S SGT SKR KT S
Sbjct: 969 SSSSSGKKSSHSGTNSSKRKKTVS 992
>AF283268-1|AAG15373.1| 46|Anopheles gambiae ribosomal protein
S18 protein.
Length = 46
Score = 23.0 bits (47), Expect = 8.5
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = -1
Query: 56 IRSVHCNHRSRHYWAL 9
++ +H + RHYW L
Sbjct: 8 LKRIHAHRGMRHYWGL 23
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 693,833
Number of Sequences: 2352
Number of extensions: 14095
Number of successful extensions: 34
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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