Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0357
(659 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 38 8e-05
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 36 5e-04
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 31 0.010
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 30 0.017
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 29 0.030
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 29 0.039
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 26 0.28
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 4.5
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 6.0
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 22 6.0
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 21 7.9
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 21 7.9
AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 21 7.9
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 37.9 bits (84), Expect = 8e-05
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +3
Query: 486 QRGGKRFPCKICARVYTHISNFCRHYVTSHKKDVKVFPCPICFKEFTRKDNMIAHLKI 659
+ G + C IC + + + RHY T H + K + C C K F+ K+N+ H +I
Sbjct: 86 KEGEDPYRCNICGKTFAVPARLTRHYRT-HTGE-KPYQCEYCSKSFSVKENLSVHRRI 141
Score = 32.7 bits (71), Expect = 0.003
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +3
Query: 492 GGKRFPCKICARVYTHISNFCRHYVTSHKKDVKVFPCPICFKEFTRKDNMIAHLK 656
G K + C IC + + + H V + + KV+ C +C + F K M H+K
Sbjct: 228 GEKPYTCDICGKSFGYNHVLKLHQVAHYGE--KVYKCTLCHETFGSKKTMELHIK 280
Score = 31.5 bits (68), Expect = 0.007
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +3
Query: 504 FPCKICARVYTHISNFCRHYVTSHKKDVKVFPCPICFKEFTRKDNMIAHLK 656
+ C +C R + H RH + H + + C +C K F + ++ H++
Sbjct: 148 YKCDVCERAFEHSGKLHRH-MRIHTGE-RPHKCTVCSKTFIQSGQLVIHMR 196
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 35.5 bits (78), Expect = 5e-04
Identities = 12/52 (23%), Positives = 28/52 (53%)
Frame = +3
Query: 498 KRFPCKICARVYTHISNFCRHYVTSHKKDVKVFPCPICFKEFTRKDNMIAHL 653
K F C++C +V ++ RH H + + + C IC + + +++++ H+
Sbjct: 4 KLFTCQLCGKVLCSKASLKRHVADKHAERQEEYRCVICERVYCSRNSLMTHI 55
Score = 25.8 bits (54), Expect = 0.37
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 498 KRFPCKICARVYTHISNFCRHYVTSHK 578
+ + C IC RVY ++ H T HK
Sbjct: 34 EEYRCVICERVYCSRNSLMTHIYTYHK 60
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 31.1 bits (67), Expect = 0.010
Identities = 10/47 (21%), Positives = 23/47 (48%)
Frame = +3
Query: 510 CKICARVYTHISNFCRHYVTSHKKDVKVFPCPICFKEFTRKDNMIAH 650
C C R ++ + RH+ H++ ++ C C + + K+++ H
Sbjct: 8 CPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTH 54
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 30.3 bits (65), Expect = 0.017
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +3
Query: 498 KRFPCKICARVYTHISNFCRHYVTSHKKDVKVFPCPICFKEFTRKDNMIAHLK 656
K F CK C +VY + H + +H K C +C K F+R + H++
Sbjct: 15 KSFSCKYCEKVYVSLGALKMH-IRTHTLPCK---CHLCGKAFSRPWLLQGHIR 63
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 29.5 bits (63), Expect = 0.030
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +3
Query: 504 FPCKICARVYTHISNFCRHYVTSHKKDVKVFPCPICFKEFTRKDNMIAHLKI 659
F C+ C ++ T ++ RH H + K C IC + ++ +++ H I
Sbjct: 3 FRCEPCNKILTSLTRLRRHIQNVHTRPSKEPICNICKRVYSSLNSLRNHKSI 54
Score = 26.2 bits (55), Expect = 0.28
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 480 LYQRGGKRFPCKICARVYTHISNFCRHYVTSHKKDVK 590
++ R K C IC RVY+ +++ H H++ K
Sbjct: 25 VHTRPSKEPICNICKRVYSSLNSLRNHKSIYHRQHSK 61
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 29.1 bits (62), Expect = 0.039
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 588 KVFPCPICFKEFTRKDNMIAHLKI 659
K F CP C K FTR ++ H+++
Sbjct: 8 KPFECPECHKRFTRDHHLKTHMRL 31
Score = 26.2 bits (55), Expect = 0.28
Identities = 12/53 (22%), Positives = 25/53 (47%)
Frame = +3
Query: 453 RNERVRQGLLYQRGGKRFPCKICARVYTHISNFCRHYVTSHKKDVKVFPCPIC 611
R+ ++ + G K + C C R + ++N RH + H + + + C +C
Sbjct: 21 RDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRH-LRVHTGE-RPYACELC 71
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 26.2 bits (55), Expect = 0.28
Identities = 12/55 (21%), Positives = 22/55 (40%)
Frame = +3
Query: 495 GKRFPCKICARVYTHISNFCRHYVTSHKKDVKVFPCPICFKEFTRKDNMIAHLKI 659
G + C +C + + RH H + + C +C K F +++ H I
Sbjct: 369 GVCYTCDVCGKTLSTKLTLKRHKEQQHFQPLNSAVCALCHKVFRTLNSLNNHKSI 423
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = +3
Query: 9 KSPIMTRTMVTMNRSNTNIIPREAAKIPI 95
+S ++T T+N T++I +PI
Sbjct: 828 QSVVVTNVTTTINTPTTSVISMSGTTVPI 856
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.8 bits (44), Expect = 6.0
Identities = 11/40 (27%), Positives = 16/40 (40%)
Frame = +2
Query: 425 IWVVSAITTKKRTSPSGTIVSKRGKTFSMQNMCKGLYTHQ 544
IW I KR P+ + G +S + + Y HQ
Sbjct: 147 IWHPGKIVNGKRVPPTNWVGVFGGSAWSWREERQAYYLHQ 186
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.8 bits (44), Expect = 6.0
Identities = 11/40 (27%), Positives = 16/40 (40%)
Frame = +2
Query: 425 IWVVSAITTKKRTSPSGTIVSKRGKTFSMQNMCKGLYTHQ 544
IW I KR P+ + G +S + + Y HQ
Sbjct: 147 IWHPGKIVNGKRVPPTNWVGVFGGSAWSWREERQAYYLHQ 186
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 21.4 bits (43), Expect = 7.9
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +2
Query: 8 QEPNNDANDGYNEPIEYKYNPERSRENSNSQDGPIKDSDEK 130
Q NN D N + +R+N N Q+G + +D K
Sbjct: 440 QNANNQNADNQNANKQNGNRQNDNRQNDNKQNGN-RQNDNK 479
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 230 LSNLNPALTHLTNFLLKL 283
++ +N +THLTN + KL
Sbjct: 488 MAQVNTEMTHLTNAVNKL 505
>AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate
dehydrogenase protein.
Length = 363
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3
Query: 510 MENVFPLFDTI 478
MEN FPLF T+
Sbjct: 316 MENRFPLFTTV 326
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,389
Number of Sequences: 438
Number of extensions: 3929
Number of successful extensions: 26
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -