Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0357
(659 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g26990.1 68418.m03220 drought-responsive family protein non-c... 33 0.22
At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2) ... 32 0.29
At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4) ... 32 0.39
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 32 0.39
At4g02200.2 68417.m00295 drought-responsive family protein simil... 31 0.68
At4g02200.1 68417.m00294 drought-responsive family protein simil... 31 0.68
At5g17780.1 68418.m02085 hydrolase, alpha/beta fold family prote... 29 2.1
At4g19570.1 68417.m02877 DNAJ heat shock N-terminal domain-conta... 29 2.7
At1g56280.2 68414.m06470 drought-responsive family protein conta... 29 2.7
At1g56280.1 68414.m06469 drought-responsive family protein conta... 29 2.7
At5g49230.1 68418.m06094 drought-responsive family protein simil... 29 3.6
At1g13860.4 68414.m01627 dehydration-responsive protein-related ... 29 3.6
At1g13860.3 68414.m01626 dehydration-responsive protein-related ... 29 3.6
At1g13860.2 68414.m01624 dehydration-responsive protein-related ... 29 3.6
At1g13860.1 68414.m01625 dehydration-responsive protein-related ... 29 3.6
At3g05700.1 68416.m00637 drought-responsive family protein conta... 28 4.8
At2g48100.2 68415.m06021 exonuclease family protein contains Pfa... 28 4.8
At2g48100.1 68415.m06020 exonuclease family protein contains Pfa... 28 4.8
At3g03760.1 68416.m00382 LOB domain protein 20 / lateral organ b... 28 6.3
At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein ... 28 6.3
At5g47050.1 68418.m05798 expressed protein 27 8.4
At4g33460.1 68417.m04753 ABC transporter family protein ABC-type... 27 8.4
At3g06760.1 68416.m00801 drought-responsive family protein simil... 27 8.4
At1g49110.1 68414.m05506 hypothetical protein 27 8.4
At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zin... 27 8.4
At1g20670.1 68414.m02589 DNA-binding bromodomain-containing prot... 27 8.4
>At5g26990.1 68418.m03220 drought-responsive family protein
non-consensus AT donor splice site at exon 3, AC
acceptor splice site at exon 4; similar to
drought-induced mRNA, Di19 [Arabidopsis thaliana]
gi|469110|emb|CAA55321
Length = 222
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +3
Query: 498 KRFPCKICARVYTHISNFCRHYVTSHKKDVKVFPCPICFKEFTRKDNMIAHLKI 659
+ + C C+ Y I + C H H D K CPIC + + +MIAH+ +
Sbjct: 42 EEYACPFCSD-YFDIVSLCCHIDEDHPMDAKNGVCPICAVKVS--SDMIAHITL 92
>At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2)
identical to WIP2 protein [Arabidopsis thaliana]
gi|18027012|gb|AAL55722; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 383
Score = 32.3 bits (70), Expect = 0.29
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 594 FPCPICFKEFTRKDNMIAHL 653
F CP+CFK F R +NM H+
Sbjct: 217 FSCPVCFKTFNRYNNMQMHM 236
>At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4)
identical to WIP4 protein [Arabidopsis thaliana]
gi|18376500|emb|CAC86168; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 412
Score = 31.9 bits (69), Expect = 0.39
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 594 FPCPICFKEFTRKDNMIAHL 653
F CP+CFK F R +NM H+
Sbjct: 256 FSCPLCFKTFNRYNNMQMHM 275
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 31.9 bits (69), Expect = 0.39
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 594 FPCPICFKEFTRKDNMIAHL 653
F CP+CFK F R +NM H+
Sbjct: 178 FTCPLCFKTFNRYNNMQMHM 197
>At4g02200.2 68417.m00295 drought-responsive family protein similar
to drought-induced mRNA, Di19 [Arabidopsis thaliana]
gi|469110|emb|CAA55321
Length = 207
Score = 31.1 bits (67), Expect = 0.68
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +3
Query: 504 FPCKICARVYTHISNFCRHYVTSHKKDVKVFPCPICFKEFTRKDNMIAHL 653
+PC C+ Y + C H H+ D CP+C + K +M+ H+
Sbjct: 43 YPCPFCSDDYDLVE-LCHHIDEEHQLDANNGICPVCSRRV--KMHMVDHI 89
>At4g02200.1 68417.m00294 drought-responsive family protein similar
to drought-induced mRNA, Di19 [Arabidopsis thaliana]
gi|469110|emb|CAA55321
Length = 214
Score = 31.1 bits (67), Expect = 0.68
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +3
Query: 504 FPCKICARVYTHISNFCRHYVTSHKKDVKVFPCPICFKEFTRKDNMIAHL 653
+PC C+ Y + C H H+ D CP+C + K +M+ H+
Sbjct: 43 YPCPFCSDDYDLVE-LCHHIDEEHQLDANNGICPVCSRRV--KMHMVDHI 89
>At5g17780.1 68418.m02085 hydrolase, alpha/beta fold family protein
low similarity to SP|Q02104 Lipase 1 precursor (EC
3.1.1.3) (Triacylglycerol lipase) {Psychrobacter
immobilis}, SP|P27747|ACOC_ALCEU Dihydrolipoamide
acetyltransferase component of acetoin cleaving system
(EC 2.3.1.12) [Ralstonia eutropha] {Alcaligenes
eutrophus}; contains Pfam profile PF00561: hydrolase,
alpha/beta fold family
Length = 417
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +1
Query: 439 GNYHEETNESV-RDYCIKE-GENVFHAKYVQGFIHTSATFADTMLLHIRK 582
GN H +S R+Y ++E ENV ++ GF+ +S + +T+ HI+K
Sbjct: 127 GNLHVVVKDSTSREYSVQEPSENVI---FIHGFMGSSHFWTETVFEHIQK 173
>At4g19570.1 68417.m02877 DNAJ heat shock N-terminal
domain-containing protein low similarity to SP|Q9QYI4
DnaJ homolog subfamily B member 12 {Mus musculus};
contains Pfam profile PF00226: DnaJ domain
Length = 558
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 516 ICARVYTHISNFCRHYVTSHKKDVKVFPCPICFKEFTRKDNMI 644
+C+R TH C+ +H K FPCP C +EF + +I
Sbjct: 314 VCSRCKTH----CKLVRANHLN--KTFPCPNCSQEFVAAEMII 350
>At1g56280.2 68414.m06470 drought-responsive family protein contains
an AT-AC intron 3, potentially contains a frameshift. An
alternate model provides a translation more consistent
with homologous proteins but lacks the AT-AC intron;
similar to drought-induced mRNA, Di19 [Arabidopsis
thaliana] gi|469110|emb|CAA55321
Length = 112
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +3
Query: 498 KRFPCKICARVYTHISNFCRHYVTSHKKDVKVFPCPIC 611
+ F C CA Y I C H H + K CP+C
Sbjct: 33 EEFACPFCAESYD-IIGLCCHIDDEHTLESKNAVCPVC 69
>At1g56280.1 68414.m06469 drought-responsive family protein contains
an AT-AC intron 3, potentially contains a frameshift. An
alternate model provides a translation more consistent
with homologous proteins but lacks the AT-AC intron;
similar to drought-induced mRNA, Di19 [Arabidopsis
thaliana] gi|469110|emb|CAA55321
Length = 200
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +3
Query: 498 KRFPCKICARVYTHISNFCRHYVTSHKKDVKVFPCPIC 611
+ F C CA Y I C H H + K CP+C
Sbjct: 33 EEFACPFCAESYD-IIGLCCHIDDEHTLESKNAVCPVC 69
>At5g49230.1 68418.m06094 drought-responsive family protein similar
to drought-induced mRNA, Di19 [Arabidopsis thaliana]
gi|469110|emb|CAA55321
Length = 211
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 504 FPCKICARVYTHISNFCRHYVTSHKKDVKVFPCPICFKE 620
F C CA + I C H +H + K CP+C K+
Sbjct: 43 FMCPFCADEFD-IVGLCCHIDVNHPVEAKNGVCPVCTKK 80
>At1g13860.4 68414.m01627 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 603
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +2
Query: 386 GNIAFFLRQ*GKTIWVVSAITTKKRTSPSGTIVSKRGKTFSMQNMCKGLYTH 541
GN+ L GK++WV++ + K R + I+ RG T ++ + C+ T+
Sbjct: 468 GNLNQALLNQGKSVWVMNVVPVKARNTL--PIILDRGFTGALHDWCEPFPTY 517
>At1g13860.3 68414.m01626 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 603
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +2
Query: 386 GNIAFFLRQ*GKTIWVVSAITTKKRTSPSGTIVSKRGKTFSMQNMCKGLYTH 541
GN+ L GK++WV++ + K R + I+ RG T ++ + C+ T+
Sbjct: 468 GNLNQALLNQGKSVWVMNVVPVKARNTL--PIILDRGFTGALHDWCEPFPTY 517
>At1g13860.2 68414.m01624 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 447
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +2
Query: 386 GNIAFFLRQ*GKTIWVVSAITTKKRTSPSGTIVSKRGKTFSMQNMCKGLYTH 541
GN+ L GK++WV++ + K R + I+ RG T ++ + C+ T+
Sbjct: 312 GNLNQALLNQGKSVWVMNVVPVKARNTL--PIILDRGFTGALHDWCEPFPTY 361
>At1g13860.1 68414.m01625 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 603
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +2
Query: 386 GNIAFFLRQ*GKTIWVVSAITTKKRTSPSGTIVSKRGKTFSMQNMCKGLYTH 541
GN+ L GK++WV++ + K R + I+ RG T ++ + C+ T+
Sbjct: 468 GNLNQALLNQGKSVWVMNVVPVKARNTL--PIILDRGFTGALHDWCEPFPTY 517
>At3g05700.1 68416.m00637 drought-responsive family protein contains
similarity to drought-induced mRNA, Di19 [Arabidopsis
thaliana] gi|469110|emb|CAA55321
Length = 181
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +3
Query: 498 KRFPCKICARVYTHISNFCRHYVTSHKKDVKVFPCPIC 611
+ F C C+ Y I + C H H + K CP+C
Sbjct: 42 EEFACPFCSD-YFDIVSLCCHIDEDHPMEAKNGVCPVC 78
>At2g48100.2 68415.m06021 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 28.3 bits (60), Expect = 4.8
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +3
Query: 600 CPICFKEFTRKDNMIAHLKI 659
C C+K F R+++++ H+KI
Sbjct: 19 CVACYKMFNRREHLVEHMKI 38
>At2g48100.1 68415.m06020 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 28.3 bits (60), Expect = 4.8
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +3
Query: 600 CPICFKEFTRKDNMIAHLKI 659
C C+K F R+++++ H+KI
Sbjct: 19 CVACYKMFNRREHLVEHMKI 38
>At3g03760.1 68416.m00382 LOB domain protein 20 / lateral organ
boundaries domain protein 20 (LBD20) identical to
SP|Q9SRV3 LOB domain protein 20 {Arabidopsis thaliana}
Length = 273
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +1
Query: 379 TNWEHRIFPSPIRKNNMGSIGNYHEETNESVRDYCIKEGENVFHAKYV 522
TN EH + P P + G HE+ ES D+ + G +K +
Sbjct: 219 TNLEHSLQPMPPHQQRRGDY--QHEDEEESGADFSVAVGSTAVASKVI 264
>At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 314
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 579 KDVKVFPCPICFKEFTRKDNMIAH 650
K+ KV CPICF+ FT + H
Sbjct: 238 KEKKVHECPICFRVFTSGQALGGH 261
>At5g47050.1 68418.m05798 expressed protein
Length = 300
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 510 CKICAR-VYTHISNFCRHYVTSHKKDVKVFPCPIC 611
C+IC R T ++ CRH V + D V CP+C
Sbjct: 253 CRICRRRSATVLALPCRHLVMCTECDGSVRICPLC 287
>At4g33460.1 68417.m04753 ABC transporter family protein ABC-type
transport protein sll1623 -Synechocystis,PIR2:S74812
Length = 271
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +1
Query: 382 NWEHRIFPSPIRKNNMGSIGNYHEETNESVRDYCIKEGENVFHAKYVQGFIHT 540
N +H++ + + +G YH+ E V+ IK E V Y+Q I T
Sbjct: 113 NPDHQVVMPTVEADVAFGLGKYHDMNQEEVKSRVIKALEAVGMRDYMQRPIQT 165
>At3g06760.1 68416.m00801 drought-responsive family protein similar
to drought-induced mRNA, Di19 [Arabidopsis thaliana]
gi|469110|emb|CAA55321
Length = 217
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +3
Query: 504 FPCKICARVYTHISNFCRHYVTSHKKDVKVFPCPICFK 617
F C CA + I C H H + K CP+C K
Sbjct: 47 FICPFCAEDFD-IVGLCCHIDEEHPVEAKNGVCPVCTK 83
>At1g49110.1 68414.m05506 hypothetical protein
Length = 212
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +1
Query: 463 ESVRDYCIKEGENVFHAKYVQGFI-HTSATFADTMLLHIRKMLR 591
E+V D+C KEG KYV+G I + +FA ++R +L+
Sbjct: 122 EAVLDFCRKEGVKCGLYKYVEGLIERKTVSFALREADNLRAVLK 165
>At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zinc
finger (C2H2 type) protein TT1 identical to transparent
testa 1 GI:18253279 from [Arabidopsis thaliana];
contains Pfam profile PF00096: Zinc finger, C2H2 type
Length = 303
Score = 27.5 bits (58), Expect = 8.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 594 FPCPICFKEFTRKDNMIAHL 653
F C +CFK F R +N+ H+
Sbjct: 145 FSCHVCFKTFNRYNNLQMHM 164
>At1g20670.1 68414.m02589 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 652
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +2
Query: 17 NNDANDGYNEPIEYKYNPERSRENSNSQDGP-IKDSDE 127
NN+ G P + +R NSN D P IKD E
Sbjct: 54 NNNNRSGSKNPNSLNHRSKRRNPNSNDGDSPWIKDEGE 91
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,101,046
Number of Sequences: 28952
Number of extensions: 288514
Number of successful extensions: 952
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1383534864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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