Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0353
         (557 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL078634-4|CAI95628.1|  200|Homo sapiens RP11-470C13.2 protein.        30   6.3  

>AL078634-4|CAI95628.1|  200|Homo sapiens RP11-470C13.2 protein.
          Length = 200

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
 Frame = +1

Query: 382 LVILKWFNII*YMFQSIY-----NLKNQVDILTKLLMTSAPSLIYLLI 510
           +V +KW  I+ +  +  Y     N KN VD+L K++    PS  YLL+
Sbjct: 153 VVFIKW--IVTFFLEKKYLTATQNTKNGVDVLPKIIQVCHPSSFYLLM 198


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,235,329
Number of Sequences: 237096
Number of extensions: 1045390
Number of successful extensions: 1548
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1548
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5590411794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)