Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0347
         (567 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069783-1|AAL39928.1|  427|Drosophila melanogaster SD02518p pro...    91   7e-19
AE014134-3124|AAF53821.2|  427|Drosophila melanogaster CG33116-P...    91   7e-19
AY069098-1|AAL39243.1|  415|Drosophila melanogaster GH11618p pro...    89   5e-18
AE014134-1341|AAF52558.3|  415|Drosophila melanogaster CG7149-PA...    89   5e-18
AE013599-1723|AAF58369.1|  417|Drosophila melanogaster CG6016-PB...    48   9e-06
AE013599-1722|AAF58370.1|  417|Drosophila melanogaster CG6016-PA...    48   9e-06

>AY069783-1|AAL39928.1|  427|Drosophila melanogaster SD02518p
           protein.
          Length = 427

 Score = 91.5 bits (217), Expect = 7e-19
 Identities = 41/91 (45%), Positives = 59/91 (64%)
 Frame = +3

Query: 255 DGLKKYKYSAIDTSPLSNYVMHPSWNFITRFIPKWIAPNLITFAGFVCMVIVILLLTIFD 434
           +G   YKYSAIDTSPLS YVMHP W+++ +F P+W APNL+TF GF+   + ++LL+ +D
Sbjct: 20  NGFDNYKYSAIDTSPLSQYVMHPFWDWLVKFFPRWFAPNLMTFLGFLFSAMNLVLLSYYD 79

Query: 435 YDFHGAERLRQGVDEYRIPNWALMAAAFCCF 527
           ++F  A    +G     IP+W  +  A   F
Sbjct: 80  WNF-DASSGEEGTTP--IPSWVWLCTAINIF 107


>AE014134-3124|AAF53821.2|  427|Drosophila melanogaster CG33116-PA
           protein.
          Length = 427

 Score = 91.5 bits (217), Expect = 7e-19
 Identities = 41/91 (45%), Positives = 59/91 (64%)
 Frame = +3

Query: 255 DGLKKYKYSAIDTSPLSNYVMHPSWNFITRFIPKWIAPNLITFAGFVCMVIVILLLTIFD 434
           +G   YKYSAIDTSPLS YVMHP W+++ +F P+W APNL+TF GF+   + ++LL+ +D
Sbjct: 20  NGFDNYKYSAIDTSPLSQYVMHPFWDWLVKFFPRWFAPNLMTFLGFLFSAMNLVLLSYYD 79

Query: 435 YDFHGAERLRQGVDEYRIPNWALMAAAFCCF 527
           ++F  A    +G     IP+W  +  A   F
Sbjct: 80  WNF-DASSGEEGTTP--IPSWVWLCTAINIF 107


>AY069098-1|AAL39243.1|  415|Drosophila melanogaster GH11618p
           protein.
          Length = 415

 Score = 88.6 bits (210), Expect = 5e-18
 Identities = 34/65 (52%), Positives = 49/65 (75%)
 Frame = +3

Query: 258 GLKKYKYSAIDTSPLSNYVMHPSWNFITRFIPKWIAPNLITFAGFVCMVIVILLLTIFDY 437
           G ++YKYS+IDTS LS YVMHP WN+  +F+PKW+APN++TF GF+  V+  +L+  +D+
Sbjct: 14  GFERYKYSSIDTSFLSVYVMHPFWNYCVKFVPKWLAPNVLTFVGFLMTVVNFILIAYYDW 73

Query: 438 DFHGA 452
            F  A
Sbjct: 74  GFEAA 78


>AE014134-1341|AAF52558.3|  415|Drosophila melanogaster CG7149-PA
           protein.
          Length = 415

 Score = 88.6 bits (210), Expect = 5e-18
 Identities = 34/65 (52%), Positives = 49/65 (75%)
 Frame = +3

Query: 258 GLKKYKYSAIDTSPLSNYVMHPSWNFITRFIPKWIAPNLITFAGFVCMVIVILLLTIFDY 437
           G ++YKYS+IDTS LS YVMHP WN+  +F+PKW+APN++TF GF+  V+  +L+  +D+
Sbjct: 14  GFERYKYSSIDTSFLSVYVMHPFWNYCVKFVPKWLAPNVLTFVGFLMTVVNFILIAYYDW 73

Query: 438 DFHGA 452
            F  A
Sbjct: 74  GFEAA 78


>AE013599-1723|AAF58369.1|  417|Drosophila melanogaster CG6016-PB,
           isoform B protein.
          Length = 417

 Score = 48.0 bits (109), Expect = 9e-06
 Identities = 21/57 (36%), Positives = 33/57 (57%)
 Frame = +3

Query: 261 LKKYKYSAIDTSPLSNYVMHPSWNFITRFIPKWIAPNLITFAGFVCMVIVILLLTIF 431
           L ++KYS    S L + ++ P WN++    P W+APNLIT  G +  V+  L+L  +
Sbjct: 20  LSEHKYSCFSVS-LLDPLLQPWWNWLVAQTPLWLAPNLITIVGLILNVVTTLILICY 75


>AE013599-1722|AAF58370.1|  417|Drosophila melanogaster CG6016-PA,
           isoform A protein.
          Length = 417

 Score = 48.0 bits (109), Expect = 9e-06
 Identities = 21/57 (36%), Positives = 33/57 (57%)
 Frame = +3

Query: 261 LKKYKYSAIDTSPLSNYVMHPSWNFITRFIPKWIAPNLITFAGFVCMVIVILLLTIF 431
           L ++KYS    S L + ++ P WN++    P W+APNLIT  G +  V+  L+L  +
Sbjct: 20  LSEHKYSCFSVS-LLDPLLQPWWNWLVAQTPLWLAPNLITIVGLILNVVTTLILICY 75


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,241,959
Number of Sequences: 53049
Number of extensions: 498253
Number of successful extensions: 1442
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1436
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)