BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbVm0347 (567 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF039712-3|AAK21400.3| 393|Caenorhabditis elegans Hypothetical ... 65 3e-11 Z67882-6|CAA91804.1| 406|Caenorhabditis elegans Hypothetical pr... 63 2e-10 Z50797-10|CAA90677.1| 406|Caenorhabditis elegans Hypothetical p... 63 2e-10 Z77662-16|CAJ90504.1| 424|Caenorhabditis elegans Hypothetical p... 51 7e-07 AL033512-5|CAA22073.2| 424|Caenorhabditis elegans Hypothetical ... 51 7e-07 U41544-3|AAA83185.3| 439|Caenorhabditis elegans Gex interacting... 31 0.76 AC006661-9|AAF39885.1| 337|Caenorhabditis elegans Hypothetical ... 31 0.76 U39996-6|AAA81092.1| 595|Caenorhabditis elegans Hypothetical pr... 29 2.3 AC006790-13|AAF60737.2| 351|Caenorhabditis elegans Serpentine r... 28 4.1 Z71177-6|CAA94872.2| 1090|Caenorhabditis elegans Hypothetical pr... 27 7.1 Z70750-5|CAA94740.1| 123|Caenorhabditis elegans Hypothetical pr... 27 7.1 DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-t... 27 7.1 AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-t... 27 7.1 AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel... 27 7.1 AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel... 27 7.1 AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel... 27 7.1 AF016435-6|AAB65882.1| 213|Caenorhabditis elegans Hypothetical ... 27 7.1 Z93388-7|CAB07654.1| 141|Caenorhabditis elegans Hypothetical pr... 27 9.4 Z92789-3|CAB07220.1| 123|Caenorhabditis elegans Hypothetical pr... 27 9.4 Z83245-9|CAB05832.1| 122|Caenorhabditis elegans Hypothetical pr... 27 9.4 Z83245-5|CAB05830.1| 122|Caenorhabditis elegans Hypothetical pr... 27 9.4 Z82271-3|CAB05211.1| 123|Caenorhabditis elegans Hypothetical pr... 27 9.4 Z81495-1|CAB04061.1| 122|Caenorhabditis elegans Hypothetical pr... 27 9.4 Z73102-9|CAA97413.1| 123|Caenorhabditis elegans Hypothetical pr... 27 9.4 Z70783-6|CAA94856.1| 195|Caenorhabditis elegans Hypothetical pr... 27 9.4 X15633-2|CAA33642.1| 122|Caenorhabditis elegans histone protein... 27 9.4 U64845-7|AAC48023.1| 123|Caenorhabditis elegans Histone protein... 27 9.4 U64843-7|AAF98225.1| 123|Caenorhabditis elegans Histone protein... 27 9.4 U64843-6|AAF98230.1| 123|Caenorhabditis elegans Histone protein... 27 9.4 U58750-8|AAB00648.1| 123|Caenorhabditis elegans Histone protein... 27 9.4 U40934-8|AAK84525.1| 122|Caenorhabditis elegans Histone protein... 27 9.4 AF047656-5|AAC05103.1| 122|Caenorhabditis elegans Histone prote... 27 9.4 AC024696-7|AAK84513.1| 141|Caenorhabditis elegans Histone prote... 27 9.4 AC024696-6|AAK84507.1| 141|Caenorhabditis elegans Histone prote... 27 9.4 >AF039712-3|AAK21400.3| 393|Caenorhabditis elegans Hypothetical protein F54D7.2 protein. Length = 393 Score = 65.3 bits (152), Expect = 3e-11 Identities = 33/90 (36%), Positives = 46/90 (51%) Frame = +3 Query: 258 GLKKYKYSAIDTSPLSNYVMHPSWNFITRFIPKWIAPNLITFAGFVCMVIVILLLTIFDY 437 G YKY+ +D SPLS YV HP WN++ F P+ PN++T G+ ++ + DY Sbjct: 23 GFDSYKYNCVDNSPLSVYVSHPFWNWLVVFYPRTWVPNVLTLVGWGFVMAGFFIEAYLDY 82 Query: 438 DFHGAERLRQGVDEYRIPNWALMAAAFCCF 527 +R G IP+W AAA C F Sbjct: 83 SI---DRNSDG-STNPIPDWFWFAAAACTF 108 >Z67882-6|CAA91804.1| 406|Caenorhabditis elegans Hypothetical protein F22E10.5 protein. Length = 406 Score = 62.9 bits (146), Expect = 2e-10 Identities = 28/59 (47%), Positives = 37/59 (62%) Frame = +3 Query: 261 LKKYKYSAIDTSPLSNYVMHPSWNFITRFIPKWIAPNLITFAGFVCMVIVILLLTIFDY 437 LK++KYSA+D S L M W F+ P WIAPNLIT+ G V +I +L+L+ F Y Sbjct: 31 LKEHKYSAVDNSWLDELCMKRWWEFVITLCPMWIAPNLITWIGLVINLITVLVLSSFSY 89 >Z50797-10|CAA90677.1| 406|Caenorhabditis elegans Hypothetical protein F22E10.5 protein. Length = 406 Score = 62.9 bits (146), Expect = 2e-10 Identities = 28/59 (47%), Positives = 37/59 (62%) Frame = +3 Query: 261 LKKYKYSAIDTSPLSNYVMHPSWNFITRFIPKWIAPNLITFAGFVCMVIVILLLTIFDY 437 LK++KYSA+D S L M W F+ P WIAPNLIT+ G V +I +L+L+ F Y Sbjct: 31 LKEHKYSAVDNSWLDELCMKRWWEFVITLCPMWIAPNLITWIGLVINLITVLVLSSFSY 89 >Z77662-16|CAJ90504.1| 424|Caenorhabditis elegans Hypothetical protein Y49A3A.1 protein. Length = 424 Score = 50.8 bits (116), Expect = 7e-07 Identities = 20/57 (35%), Positives = 33/57 (57%) Frame = +3 Query: 261 LKKYKYSAIDTSPLSNYVMHPSWNFITRFIPKWIAPNLITFAGFVCMVIVILLLTIF 431 L ++ YSA+DTS L M W + + P W+APNL+T G + + +L+L+ + Sbjct: 61 LDEHVYSAVDTSWLDELCMKKFWEAVVLYYPLWVAPNLLTLIGLIVNLTTVLVLSFY 117 >AL033512-5|CAA22073.2| 424|Caenorhabditis elegans Hypothetical protein Y49A3A.1 protein. Length = 424 Score = 50.8 bits (116), Expect = 7e-07 Identities = 20/57 (35%), Positives = 33/57 (57%) Frame = +3 Query: 261 LKKYKYSAIDTSPLSNYVMHPSWNFITRFIPKWIAPNLITFAGFVCMVIVILLLTIF 431 L ++ YSA+DTS L M W + + P W+APNL+T G + + +L+L+ + Sbjct: 61 LDEHVYSAVDTSWLDELCMKKFWEAVVLYYPLWVAPNLLTLIGLIVNLTTVLVLSFY 117 >U41544-3|AAA83185.3| 439|Caenorhabditis elegans Gex interacting protein protein 15 protein. Length = 439 Score = 30.7 bits (66), Expect = 0.76 Identities = 18/58 (31%), Positives = 30/58 (51%) Frame = -1 Query: 186 PDKTPRSKDAGNISK*KQIIIFVRHIRFEHFTLR*FNIFPNLNITILYRNDNFIYRTR 13 P P + D GN + + RH++F HF L+ + FP++ +++L D F TR Sbjct: 199 PAPAPPANDFGNYQP--KSALSSRHLKFSHFLLQCY-FFPSVFLSLLSVTDPFPATTR 253 >AC006661-9|AAF39885.1| 337|Caenorhabditis elegans Hypothetical protein H20J04.7 protein. Length = 337 Score = 30.7 bits (66), Expect = 0.76 Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Frame = -2 Query: 227 SKSFSMVVIRFLQILTRLQGQKMLVIFRNKNKL-LFSFVTFDLNTSLYANLTFFRI*TLL 51 S S ++++ L++L + M++ KN L L F F T + +++ FR+ L+ Sbjct: 36 SYSIKIILLLVLEVLNVMVQSFMVIFILKKNCLKLTPFFAF---TVVRSSMIIFRVSFLI 92 Query: 50 FCIVMIILFTEHAL 9 F I+M+ + +E +L Sbjct: 93 FAIIMLEMTSESSL 106 >U39996-6|AAA81092.1| 595|Caenorhabditis elegans Hypothetical protein C56E6.5 protein. Length = 595 Score = 29.1 bits (62), Expect = 2.3 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 4/61 (6%) Frame = +3 Query: 261 LKKYKYSAIDTSPLS--NYVMHPSWNFITRFIPKWIAPN--LITFAGFVCMVIVILLLTI 428 L K S+ID + +Y+ S N + P W APN FA C+ + L+++ Sbjct: 518 LSKLLSSSIDNEECTFPSYMCKLSMNLHSDLYPPWYAPNDVFTNFAILFCLSLTFLVISF 577 Query: 429 F 431 F Sbjct: 578 F 578 >AC006790-13|AAF60737.2| 351|Caenorhabditis elegans Serpentine receptor, class z protein5 protein. Length = 351 Score = 28.3 bits (60), Expect = 4.1 Identities = 12/29 (41%), Positives = 21/29 (72%) Frame = +3 Query: 363 APNLITFAGFVCMVIVILLLTIFDYDFHG 449 AP ++ F +C+++VILLL +F+ F+G Sbjct: 57 APIIVHFHRLICVMLVILLLCLFEM-FYG 84 >Z71177-6|CAA94872.2| 1090|Caenorhabditis elegans Hypothetical protein AC3.5 protein. Length = 1090 Score = 27.5 bits (58), Expect = 7.1 Identities = 10/35 (28%), Positives = 19/35 (54%) Frame = +3 Query: 255 DGLKKYKYSAIDTSPLSNYVMHPSWNFITRFIPKW 359 +GLK+YKY + S + PS++++ P + Sbjct: 309 NGLKEYKYKNSEGKEQSMFTTQPSYSYLRHVFPSF 343 >Z70750-5|CAA94740.1| 123|Caenorhabditis elegans Hypothetical protein C50F4.5 protein. Length = 123 Score = 27.5 bits (58), Expect = 7.1 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -2 Query: 533 KPKTAKRRSH*RPVRYPVFVYALPK 459 KPK K+R H R Y V++Y + K Sbjct: 20 KPKDGKKRKHARKESYSVYIYRVLK 44 >DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-type voltage-gatedion channel alpha-1 subunit protein. Length = 1797 Score = 27.5 bits (58), Expect = 7.1 Identities = 15/57 (26%), Positives = 32/57 (56%) Frame = -2 Query: 239 KYLYSKSFSMVVIRFLQILTRLQGQKMLVIFRNKNKLLFSFVTFDLNTSLYANLTFF 69 K+ Y+ + +V++RF I +R KML++ ++ F +F + T+L+ + F+ Sbjct: 1302 KFTYTFGYLVVILRFFTIASRNSTLKMLML----TVIMSMFRSFFIITALFLLVLFY 1354 >AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-type voltage-gatedion channel alpha-1 subunit protein. Length = 1831 Score = 27.5 bits (58), Expect = 7.1 Identities = 15/57 (26%), Positives = 32/57 (56%) Frame = -2 Query: 239 KYLYSKSFSMVVIRFLQILTRLQGQKMLVIFRNKNKLLFSFVTFDLNTSLYANLTFF 69 K+ Y+ + +V++RF I +R KML++ ++ F +F + T+L+ + F+ Sbjct: 1336 KFTYTFGYLVVILRFFTIASRNSTLKMLML----TVIMSMFRSFFIITALFLLVLFY 1388 >AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel type/putative nematodecalcium channel protein 1, isoform a protein. Length = 1562 Score = 27.5 bits (58), Expect = 7.1 Identities = 15/57 (26%), Positives = 32/57 (56%) Frame = -2 Query: 239 KYLYSKSFSMVVIRFLQILTRLQGQKMLVIFRNKNKLLFSFVTFDLNTSLYANLTFF 69 K+ Y+ + +V++RF I +R KML++ ++ F +F + T+L+ + F+ Sbjct: 1394 KFTYTFGYLVVILRFFTIASRNSTLKMLML----TVIMSMFRSFFIITALFLLVLFY 1446 >AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel type/putative nematodecalcium channel protein 1, isoform c protein. Length = 1913 Score = 27.5 bits (58), Expect = 7.1 Identities = 15/57 (26%), Positives = 32/57 (56%) Frame = -2 Query: 239 KYLYSKSFSMVVIRFLQILTRLQGQKMLVIFRNKNKLLFSFVTFDLNTSLYANLTFF 69 K+ Y+ + +V++RF I +R KML++ ++ F +F + T+L+ + F+ Sbjct: 1447 KFTYTFGYLVVILRFFTIASRNSTLKMLML----TVIMSMFRSFFIITALFLLVLFY 1499 >AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel type/putative nematodecalcium channel protein 1, isoform d protein. Length = 1861 Score = 27.5 bits (58), Expect = 7.1 Identities = 15/57 (26%), Positives = 32/57 (56%) Frame = -2 Query: 239 KYLYSKSFSMVVIRFLQILTRLQGQKMLVIFRNKNKLLFSFVTFDLNTSLYANLTFF 69 K+ Y+ + +V++RF I +R KML++ ++ F +F + T+L+ + F+ Sbjct: 1366 KFTYTFGYLVVILRFFTIASRNSTLKMLML----TVIMSMFRSFFIITALFLLVLFY 1418 >AF016435-6|AAB65882.1| 213|Caenorhabditis elegans Hypothetical protein F59D6.7 protein. Length = 213 Score = 27.5 bits (58), Expect = 7.1 Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 3/58 (5%) Frame = -2 Query: 227 SKSFSMVVIRFLQILTRLQGQKML---VIFRNKNKLLFSFVTFDLNTSLYANLTFFRI 63 SKS + +F++IL Q + + K+KL F+F +DLN + Y F++ Sbjct: 98 SKSGQLTFRQFVRILAHFQPISKVKDNALNSRKDKLRFAFKMYDLNKNNYITREEFKV 155 >Z93388-7|CAB07654.1| 141|Caenorhabditis elegans Hypothetical protein T10C6.11 protein. Length = 141 Score = 27.1 bits (57), Expect = 9.4 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -2 Query: 533 KPKTAKRRSH*RPVRYPVFVYALPK 459 KPK K+R H R Y V++Y + K Sbjct: 38 KPKDGKKRRHARKESYSVYIYRVLK 62 >Z92789-3|CAB07220.1| 123|Caenorhabditis elegans Hypothetical protein H02I12.6 protein. Length = 123 Score = 27.1 bits (57), Expect = 9.4 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -2 Query: 533 KPKTAKRRSH*RPVRYPVFVYALPK 459 KPK K+R H R Y V++Y + K Sbjct: 20 KPKDGKKRRHARKESYSVYIYRVLK 44 >Z83245-9|CAB05832.1| 122|Caenorhabditis elegans Hypothetical protein ZK131.9 protein. Length = 122 Score = 27.1 bits (57), Expect = 9.4 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -2 Query: 533 KPKTAKRRSH*RPVRYPVFVYALPK 459 KPK K+R H R Y V++Y + K Sbjct: 19 KPKDGKKRRHARKESYSVYIYRVLK 43 >Z83245-5|CAB05830.1| 122|Caenorhabditis elegans Hypothetical protein ZK131.5 protein. Length = 122 Score = 27.1 bits (57), Expect = 9.4 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -2 Query: 533 KPKTAKRRSH*RPVRYPVFVYALPK 459 KPK K+R H R Y V++Y + K Sbjct: 19 KPKDGKKRRHARKESYSVYIYRVLK 43 >Z82271-3|CAB05211.1| 123|Caenorhabditis elegans Hypothetical protein F54E12.4 protein. Length = 123 Score = 27.1 bits (57), Expect = 9.4 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -2 Query: 533 KPKTAKRRSH*RPVRYPVFVYALPK 459 KPK K+R H R Y V++Y + K Sbjct: 20 KPKDGKKRRHARKESYSVYIYRVLK 44 >Z81495-1|CAB04061.1| 122|Caenorhabditis elegans Hypothetical protein F08G2.1 protein. Length = 122 Score = 27.1 bits (57), Expect = 9.4 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -2 Query: 533 KPKTAKRRSH*RPVRYPVFVYALPK 459 KPK K+R H R Y V++Y + K Sbjct: 19 KPKDGKKRRHARKESYSVYIYRVLK 43 >Z73102-9|CAA97413.1| 123|Caenorhabditis elegans Hypothetical protein B0035.8 protein. Length = 123 Score = 27.1 bits (57), Expect = 9.4 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -2 Query: 533 KPKTAKRRSH*RPVRYPVFVYALPK 459 KPK K+R H R Y V++Y + K Sbjct: 20 KPKDGKKRRHARKESYSVYIYRVLK 44 >Z70783-6|CAA94856.1| 195|Caenorhabditis elegans Hypothetical protein ZK856.8 protein. Length = 195 Score = 27.1 bits (57), Expect = 9.4 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 3/49 (6%) Frame = -2 Query: 200 RFLQILTRLQG---QKMLVIFRNKNKLLFSFVTFDLNTSLYANLTFFRI 63 +F++IL Q K + K+KLLF+F +DLN + Y F++ Sbjct: 89 QFVRILAHFQPISRVKKNALNSRKDKLLFAFKMYDLNKNDYITREEFKV 137 >X15633-2|CAA33642.1| 122|Caenorhabditis elegans histone protein protein. Length = 122 Score = 27.1 bits (57), Expect = 9.4 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -2 Query: 533 KPKTAKRRSH*RPVRYPVFVYALPK 459 KPK K+R H R Y V++Y + K Sbjct: 19 KPKDGKKRRHARKESYSVYIYRVLK 43 >U64845-7|AAC48023.1| 123|Caenorhabditis elegans Histone protein 8 protein. Length = 123 Score = 27.1 bits (57), Expect = 9.4 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -2 Query: 533 KPKTAKRRSH*RPVRYPVFVYALPK 459 KPK K+R H R Y V++Y + K Sbjct: 20 KPKDGKKRRHARKESYSVYIYRVLK 44 >U64843-7|AAF98225.1| 123|Caenorhabditis elegans Histone protein 20 protein. Length = 123 Score = 27.1 bits (57), Expect = 9.4 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -2 Query: 533 KPKTAKRRSH*RPVRYPVFVYALPK 459 KPK K+R H R Y V++Y + K Sbjct: 20 KPKDGKKRRHARKESYSVYIYRVLK 44 >U64843-6|AAF98230.1| 123|Caenorhabditis elegans Histone protein 22 protein. Length = 123 Score = 27.1 bits (57), Expect = 9.4 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -2 Query: 533 KPKTAKRRSH*RPVRYPVFVYALPK 459 KPK K+R H R Y V++Y + K Sbjct: 20 KPKDGKKRRHARKESYSVYIYRVLK 44 >U58750-8|AAB00648.1| 123|Caenorhabditis elegans Histone protein 62 protein. Length = 123 Score = 27.1 bits (57), Expect = 9.4 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -2 Query: 533 KPKTAKRRSH*RPVRYPVFVYALPK 459 KPK K+R H R Y V++Y + K Sbjct: 20 KPKDGKKRRHARKESYSVYIYRVLK 44 >U40934-8|AAK84525.1| 122|Caenorhabditis elegans Histone protein 29 protein. Length = 122 Score = 27.1 bits (57), Expect = 9.4 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -2 Query: 533 KPKTAKRRSH*RPVRYPVFVYALPK 459 KPK K+R H R Y V++Y + K Sbjct: 19 KPKDGKKRRHARKESYSVYIYRVLK 43 >AF047656-5|AAC05103.1| 122|Caenorhabditis elegans Histone protein 34 protein. Length = 122 Score = 27.1 bits (57), Expect = 9.4 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -2 Query: 533 KPKTAKRRSH*RPVRYPVFVYALPK 459 KPK K+R H R Y V++Y + K Sbjct: 19 KPKDGKKRRHARKESYSVYIYRVLK 43 >AC024696-7|AAK84513.1| 141|Caenorhabditis elegans Histone protein 54 protein. Length = 141 Score = 27.1 bits (57), Expect = 9.4 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -2 Query: 533 KPKTAKRRSH*RPVRYPVFVYALPK 459 KPK K+R H R Y V++Y + K Sbjct: 38 KPKDGKKRRHARKESYSVYIYRVLK 62 >AC024696-6|AAK84507.1| 141|Caenorhabditis elegans Histone protein 52 protein. Length = 141 Score = 27.1 bits (57), Expect = 9.4 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -2 Query: 533 KPKTAKRRSH*RPVRYPVFVYALPK 459 KPK K+R H R Y V++Y + K Sbjct: 38 KPKDGKKRRHARKESYSVYIYRVLK 62 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,817,748 Number of Sequences: 27780 Number of extensions: 270025 Number of successful extensions: 671 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 643 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 670 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1176726318 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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