Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0347
(567 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g25585.2 68416.m03183 aminoalcoholphosphotransferase, putativ... 59 2e-09
At3g25585.1 68416.m03182 aminoalcoholphosphotransferase, putativ... 59 2e-09
At1g13560.1 68414.m01590 aminoalcoholphosphotransferase (AAPT1) ... 56 2e-08
At1g26440.3 68414.m03225 expressed protein similar to SP|Q41706 ... 34 0.076
At1g26440.2 68414.m03224 expressed protein similar to SP|Q41706 ... 34 0.076
At1g26440.1 68414.m03223 expressed protein similar to SP|Q41706 ... 34 0.076
At2g03530.1 68415.m00313 F-box family protein-related similar to... 33 0.18
At2g03520.1 68415.m00312 expressed protein similar to SP|Q41706 ... 29 2.2
At2g46050.1 68415.m05728 pentatricopeptide (PPR) repeat-containi... 28 5.0
At2g41440.1 68415.m05120 expressed protein 27 6.6
At3g45420.1 68416.m04903 lectin protein kinase family protein co... 27 8.7
At2g29760.1 68415.m03616 pentatricopeptide (PPR) repeat-containi... 27 8.7
>At3g25585.2 68416.m03183 aminoalcoholphosphotransferase, putative
strong similarity to aminoalcoholphosphotransferase
[Arabidopsis thaliana] GI:3661593; contains Pfam profile
PF01066: CDP-alcohol phosphatidyltransferase
Length = 389
Score = 59.3 bits (137), Expect = 2e-09
Identities = 25/57 (43%), Positives = 36/57 (63%)
Frame = +3
Query: 261 LKKYKYSAIDTSPLSNYVMHPSWNFITRFIPKWIAPNLITFAGFVCMVIVILLLTIF 431
LKK+KYS +D S L+ YV+ P WN + P W+ PN+IT GF+ ++ LL I+
Sbjct: 12 LKKHKYSGVDHSYLAKYVLQPFWNRFVKIFPLWMPPNMITLMGFMFLLTSALLGYIY 68
>At3g25585.1 68416.m03182 aminoalcoholphosphotransferase, putative
strong similarity to aminoalcoholphosphotransferase
[Arabidopsis thaliana] GI:3661593; contains Pfam profile
PF01066: CDP-alcohol phosphatidyltransferase
Length = 389
Score = 59.3 bits (137), Expect = 2e-09
Identities = 25/57 (43%), Positives = 36/57 (63%)
Frame = +3
Query: 261 LKKYKYSAIDTSPLSNYVMHPSWNFITRFIPKWIAPNLITFAGFVCMVIVILLLTIF 431
LKK+KYS +D S L+ YV+ P WN + P W+ PN+IT GF+ ++ LL I+
Sbjct: 12 LKKHKYSGVDHSYLAKYVLQPFWNRFVKIFPLWMPPNMITLMGFMFLLTSALLGYIY 68
>At1g13560.1 68414.m01590 aminoalcoholphosphotransferase (AAPT1)
identical to aminoalcoholphosphotransferase GI:3661593
from [Arabidopsis thaliana]
Length = 389
Score = 55.6 bits (128), Expect = 2e-08
Identities = 24/57 (42%), Positives = 34/57 (59%)
Frame = +3
Query: 261 LKKYKYSAIDTSPLSNYVMHPSWNFITRFIPKWIAPNLITFAGFVCMVIVILLLTIF 431
L +YKYS +D S L+ YV+ P W + P W+ PN+IT GF+ +V LL I+
Sbjct: 12 LHRYKYSGVDHSYLAKYVLQPFWTRFVKVFPLWMPPNMITLMGFMFLVTSSLLGYIY 68
>At1g26440.3 68414.m03225 expressed protein similar to SP|Q41706 A3
protein (unknown function) {Vigna unguiculata}
Length = 413
Score = 33.9 bits (74), Expect = 0.076
Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 3/81 (3%)
Frame = +3
Query: 294 SPLSNYVMHPSWNFITRFIPKWIAPNLITFAGFVCMVIVILLLTIFDYD---FHGAERLR 464
SPL N + W+ + + +PK I + C VI + L F Y R
Sbjct: 258 SPLFNLATNDQWHTLKQGVPKLIVYTAFFYFSLSCFVIAVALNISFLYKPVLDSPRSSFR 317
Query: 465 QGVDEYRIPNWALMAAAFCCF 527
+ + ++ WAL A C F
Sbjct: 318 EYLSDWNGRGWALAAGLLCGF 338
>At1g26440.2 68414.m03224 expressed protein similar to SP|Q41706 A3
protein (unknown function) {Vigna unguiculata}
Length = 413
Score = 33.9 bits (74), Expect = 0.076
Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 3/81 (3%)
Frame = +3
Query: 294 SPLSNYVMHPSWNFITRFIPKWIAPNLITFAGFVCMVIVILLLTIFDYD---FHGAERLR 464
SPL N + W+ + + +PK I + C VI + L F Y R
Sbjct: 258 SPLFNLATNDQWHTLKQGVPKLIVYTAFFYFSLSCFVIAVALNISFLYKPVLDSPRSSFR 317
Query: 465 QGVDEYRIPNWALMAAAFCCF 527
+ + ++ WAL A C F
Sbjct: 318 EYLSDWNGRGWALAAGLLCGF 338
>At1g26440.1 68414.m03223 expressed protein similar to SP|Q41706 A3
protein (unknown function) {Vigna unguiculata}
Length = 377
Score = 33.9 bits (74), Expect = 0.076
Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 3/81 (3%)
Frame = +3
Query: 294 SPLSNYVMHPSWNFITRFIPKWIAPNLITFAGFVCMVIVILLLTIFDYD---FHGAERLR 464
SPL N + W+ + + +PK I + C VI + L F Y R
Sbjct: 222 SPLFNLATNDQWHTLKQGVPKLIVYTAFFYFSLSCFVIAVALNISFLYKPVLDSPRSSFR 281
Query: 465 QGVDEYRIPNWALMAAAFCCF 527
+ + ++ WAL A C F
Sbjct: 282 EYLSDWNGRGWALAAGLLCGF 302
>At2g03530.1 68415.m00313 F-box family protein-related similar to A3
protein (Swiss-Prot:Q41706)(unknown function) [Vigna
unguiculata]; contains 9 transmembrane domains;
supported by tandem duplication of F-box family protein
(GI:3805763) (TIGR_Ath1:At2g07140) [Arabidopsis
thaliana]
Length = 385
Score = 32.7 bits (71), Expect = 0.18
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Frame = +3
Query: 294 SPLSNYVMHPSWNFITRFIPKWIAPNLITFAGFVCMVIVILLLTIF-DYDFHGAER--LR 464
SP N + WN + + +PK + + C +I ++L +F Y G + +
Sbjct: 234 SPAFNLATNDQWNRLKQGVPKLVVYTAFFYFSVSCFIIALILNVVFLYYPVLGLPKSSFK 293
Query: 465 QGVDEYRIPNWALMAAAFCCF 527
++++ WA +A C F
Sbjct: 294 AYLNDWNGRYWAFLAGFLCGF 314
>At2g03520.1 68415.m00312 expressed protein similar to SP|Q41706 A3
protein (unknown function) {Vigna unguiculata}
Length = 388
Score = 29.1 bits (62), Expect = 2.2
Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
Frame = +3
Query: 213 GKTLRV*IFVSKPFDGLKKYKYSAIDTSPLSNYVMHPSWNFITRFIPKWIAPNLITFAGF 392
GK++ + +F++ F G+ +S P N + W+ + + +PK + +
Sbjct: 216 GKSIMIGLFITL-FAGISLSLFS-----PAFNLATNDQWSTLPKGVPKLVVYTAFFYFSI 269
Query: 393 VCMVIVILLLTIFDY-DFHGAER--LRQGVDEYRIPNWALMAAAFCCF 527
+I ++L IF Y G R L++ + + + WA+ A C F
Sbjct: 270 AGFLISLILNLIFLYRPMVGLARSSLKKYIYDSKGRGWAVFAGFLCGF 317
>At2g46050.1 68415.m05728 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 590
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 244 QNHLTGLRNISTAPSTQARLATMLCIRVGTLSLD 345
QNHL+ L+NI T PS+ + + + + SLD
Sbjct: 17 QNHLSSLQNIRTIPSSSSSPVAISSVSKLSASLD 50
>At2g41440.1 68415.m05120 expressed protein
Length = 544
Score = 27.5 bits (58), Expect = 6.6
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -2
Query: 227 SKSFSMVVIRFLQILTRLQ 171
S S V+IRFLQ++TRLQ
Sbjct: 22 SNESSCVLIRFLQVITRLQ 40
>At3g45420.1 68416.m04903 lectin protein kinase family protein
contains Serine/Threonine protein kinases active-site
signature, Prosite:PS00108
Length = 667
Score = 27.1 bits (57), Expect = 8.7
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 309 YVMHPSWNFITRFIPKWIAP-NLITFAGFVCMVIVILLLTIFDYDFHGAERLRQGVD 476
+V+ PS NF F +++ N T ++ I L T+ DFH E+ G+D
Sbjct: 103 FVVSPSMNFSHAFPTQYLGVFNSSTNVTSSSHLLAIELDTVETVDFHDLEKAHVGID 159
>At2g29760.1 68415.m03616 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 738
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +3
Query: 156 QHLLTLESCQDLKETYNDHGKTLRV*IFVSKPFDGLKKYKYSAIDT 293
+H+ +E C L++ HG +R F S P+ K + +A+ +
Sbjct: 32 RHISLIERCVSLRQLKQTHGHMIRTGTF-SDPYSASKLFAMAALSS 76
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,965,644
Number of Sequences: 28952
Number of extensions: 246622
Number of successful extensions: 539
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 539
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1092379416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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