Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0345
(730 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68114-2|CAA92158.1| 463|Caenorhabditis elegans Hypothetical pr... 31 0.64
AF106579-5|AAC78198.1| 174|Caenorhabditis elegans Hypothetical ... 29 2.6
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr... 29 3.4
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein. 29 3.4
L23647-8|AAK29993.1| 54|Caenorhabditis elegans Hypothetical pr... 28 5.9
L07144-2|AAK21439.1| 54|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z92973-7|CAB07494.1| 1213|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z81481-10|CAB03951.1| 1213|Caenorhabditis elegans Hypothetical p... 28 7.9
AC084153-7|AAK84593.1| 451|Caenorhabditis elegans Hypothetical ... 28 7.9
>Z68114-2|CAA92158.1| 463|Caenorhabditis elegans Hypothetical
protein F17A2.3 protein.
Length = 463
Score = 31.5 bits (68), Expect = 0.64
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = -3
Query: 683 NNAEDKVPEVEAALRTFGNCLKGLVDLNVLKTEIEEAKPNGALDEVFKKYCDKSAQLKAV 504
N K+PE+EA T +NV T+I+ + N +LD K+Y D + +
Sbjct: 145 NPMNTKIPEIEAFHET----------INVANTDIQTSTKNTSLDGKIKQYSDLEERNLDI 194
Query: 503 SARCCRA 483
+CC +
Sbjct: 195 FIKCCES 201
>AF106579-5|AAC78198.1| 174|Caenorhabditis elegans Hypothetical
protein F54E2.2 protein.
Length = 174
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = -1
Query: 334 D*ESQDMLFKFETELPHCGIRQ*LEPCEKCAKVDEMTSCIVKSLEECSTPTP 179
D +S +E LP C ++ C K AK T C+ S + C P P
Sbjct: 79 DYQSNKQQESYEIGLPVCRLKFLTASCVKSAKCPSGTVCLDFSTQRCCHPMP 130
>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 450 HINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 355
++ DA N T +LID K+GD +A+ +A G
Sbjct: 66 NVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97
>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 450 HINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 355
++ DA N T +LID K+GD +A+ +A G
Sbjct: 66 NVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97
>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
Length = 1383
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 450 HINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 355
++ DA N T +LID K+GD +A+ +A G
Sbjct: 66 NVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97
>L23647-8|AAK29993.1| 54|Caenorhabditis elegans Hypothetical
protein ZC262.5 protein.
Length = 54
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -3
Query: 725 FSQITAVVTSQCTKNNAEDKVPEVEAALRT 636
+SQI A V QCTK A K P +A L+T
Sbjct: 14 YSQIAAQVVRQCTKGGANVKKP--QATLKT 41
>L07144-2|AAK21439.1| 54|Caenorhabditis elegans Hypothetical
protein R05D3.6 protein.
Length = 54
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -3
Query: 725 FSQITAVVTSQCTKNNAEDKVPEVEAALRT 636
+SQI A V QCTK A K P +A L+T
Sbjct: 14 YSQIAAQVVRQCTKGGANVKKP--QATLKT 41
>Z92973-7|CAB07494.1| 1213|Caenorhabditis elegans Hypothetical
protein C38D9.5 protein.
Length = 1213
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2
Query: 473 QGRTPCSTELIQLSVEHSCHSTS*K 547
+G TP TEL QL +++S HS S K
Sbjct: 712 KGATPTFTELSQLELDYSKHSVSIK 736
>Z81481-10|CAB03951.1| 1213|Caenorhabditis elegans Hypothetical
protein C38D9.5 protein.
Length = 1213
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2
Query: 473 QGRTPCSTELIQLSVEHSCHSTS*K 547
+G TP TEL QL +++S HS S K
Sbjct: 712 KGATPTFTELSQLELDYSKHSVSIK 736
>AC084153-7|AAK84593.1| 451|Caenorhabditis elegans Hypothetical
protein Y22D7AL.4 protein.
Length = 451
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3
Query: 662 PEVEAALRTFGNCLKGLVDLNVLKTEIEEAKPN 564
PE E +RT G+ G++D+N + + A+PN
Sbjct: 64 PEFEVEIRTNGHIYAGILDINGAEPGDKGAEPN 96
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,221,965
Number of Sequences: 27780
Number of extensions: 338335
Number of successful extensions: 981
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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