Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0344
         (748 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY971098-1|AAY18519.1|  152|Homo sapiens immunoglobulin alpha he...    33   1.1  
DQ090887-1|AAY99645.1| 1196|Homo sapiens AHI1 protein.                 31   3.3  
AL133544-3|CAI22523.1| 1168|Homo sapiens protein (  the 5' end o...    31   3.3  
AL133544-1|CAI22521.1|  407|Homo sapiens protein ( Human DNA seq...    31   3.3  
AL049552-2|CAI20387.1| 1168|Homo sapiens protein (  protein, a n...    31   3.3  
AL049552-1|CAI20385.1|  407|Homo sapiens protein ( Human DNA seq...    31   3.3  
AL023693-5|CAI20201.1| 1168|Homo sapiens protein ( Human DNA seq...    31   3.3  
AK092262-1|BAC03840.1| 1196|Homo sapiens protein ( Homo sapiens ...    31   3.3  
AK024085-1|BAB14820.1|  498|Homo sapiens protein ( Homo sapiens ...    31   3.3  
AK000076-1|BAA90929.1|  504|Homo sapiens protein ( Homo sapiens ...    31   3.3  
AJ606362-1|CAE54481.1| 1196|Homo sapiens AHI1 protein protein.         31   3.3  
AJ459825-1|CAD30872.1| 1053|Homo sapiens AHI1 protein protein.         31   3.3  
AJ459824-1|CAD30871.1| 1196|Homo sapiens AHI1 protein protein.         31   3.3  

>AY971098-1|AAY18519.1|  152|Homo sapiens immunoglobulin alpha heavy
           chain variable region protein.
          Length = 152

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = -3

Query: 461 LYFCSSPKLMMSEARQYFPRTAASMLRHSSKSPYWFPLPL--SMPDGGLAVA 312
           +Y+C+SP +   + + +   T  ++   S  SP  FPL L  + PDG + +A
Sbjct: 93  MYYCASPDISHGDFQHWGQGTLVTVSSASPTSPKVFPLSLCSTQPDGNVVIA 144


>DQ090887-1|AAY99645.1| 1196|Homo sapiens AHI1 protein.
          Length = 1196

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +1

Query: 457 YKKLDYLIHSGHYIRSNIQIWVTEFRGIPVCF 552
           Y K++ L HS H+   N +I  TEF+GIP+ +
Sbjct: 774 YVKINDLEHSVHHWTINKEIKETEFKGIPISY 805


>AL133544-3|CAI22523.1| 1168|Homo sapiens protein (  the 5' end of a
           novel gene and).).
          Length = 1168

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +1

Query: 457 YKKLDYLIHSGHYIRSNIQIWVTEFRGIPVCF 552
           Y K++ L HS H+   N +I  TEF+GIP+ +
Sbjct: 774 YVKINDLEHSVHHWTINKEIKETEFKGIPISY 805


>AL133544-1|CAI22521.1|  407|Homo sapiens protein ( Human DNA
           sequence from clone RP1-71N10 on chromosome 6 Contains
           the5' end of a gene for a novel protein, the 5' end of a
           novel gene and).
          Length = 407

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +1

Query: 457 YKKLDYLIHSGHYIRSNIQIWVTEFRGIPVCF 552
           Y K++ L HS H+   N +I  TEF+GIP+ +
Sbjct: 128 YVKINDLEHSVHHWTINKEIKETEFKGIPISY 159


>AL049552-2|CAI20387.1| 1168|Homo sapiens protein (  protein, a
           novel gene and a  ).).
          Length = 1168

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +1

Query: 457 YKKLDYLIHSGHYIRSNIQIWVTEFRGIPVCF 552
           Y K++ L HS H+   N +I  TEF+GIP+ +
Sbjct: 774 YVKINDLEHSVHHWTINKEIKETEFKGIPISY 805


>AL049552-1|CAI20385.1|  407|Homo sapiens protein ( Human DNA
           sequence from clone RP3-388E23 on chromosome
           6q22.33-24.1 Contains part of the gene for a novel
           protein, a novel gene and a  ).
          Length = 407

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +1

Query: 457 YKKLDYLIHSGHYIRSNIQIWVTEFRGIPVCF 552
           Y K++ L HS H+   N +I  TEF+GIP+ +
Sbjct: 128 YVKINDLEHSVHHWTINKEIKETEFKGIPISY 159


>AL023693-5|CAI20201.1| 1168|Homo sapiens protein ( Human DNA
           sequence from clone RP1-32B1 on chromosome 6q22.33-23.3 
           Contains the MYB gene for v-myb myeloblastosis viral
           oncogene  ).
          Length = 1168

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +1

Query: 457 YKKLDYLIHSGHYIRSNIQIWVTEFRGIPVCF 552
           Y K++ L HS H+   N +I  TEF+GIP+ +
Sbjct: 774 YVKINDLEHSVHHWTINKEIKETEFKGIPISY 805


>AK092262-1|BAC03840.1| 1196|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34943 fis, clone NT2RP7007580. ).
          Length = 1196

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +1

Query: 457 YKKLDYLIHSGHYIRSNIQIWVTEFRGIPVCF 552
           Y K++ L HS H+   N +I  TEF+GIP+ +
Sbjct: 774 YVKINDLEHSVHHWTINKEIKETEFKGIPISY 805


>AK024085-1|BAB14820.1|  498|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14023 fis, clone HEMBA1003645, weakly similar to
           TIPD PROTEIN. ).
          Length = 498

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +1

Query: 457 YKKLDYLIHSGHYIRSNIQIWVTEFRGIPVCF 552
           Y K++ L HS H+   N +I  TEF+GIP+ +
Sbjct: 128 YVKINDLEHSVHHWTINKEIKETEFKGIPISY 159


>AK000076-1|BAA90929.1|  504|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20069 fis, clone COL01816. ).
          Length = 504

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +1

Query: 457 YKKLDYLIHSGHYIRSNIQIWVTEFRGIPVCF 552
           Y K++ L HS H+   N +I  TEF+GIP+ +
Sbjct: 225 YVKINDLEHSVHHWTINKEIKETEFKGIPISY 256


>AJ606362-1|CAE54481.1| 1196|Homo sapiens AHI1 protein protein.
          Length = 1196

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +1

Query: 457 YKKLDYLIHSGHYIRSNIQIWVTEFRGIPVCF 552
           Y K++ L HS H+   N +I  TEF+GIP+ +
Sbjct: 774 YVKINDLEHSVHHWTINKEIKETEFKGIPISY 805


>AJ459825-1|CAD30872.1| 1053|Homo sapiens AHI1 protein protein.
          Length = 1053

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +1

Query: 457 YKKLDYLIHSGHYIRSNIQIWVTEFRGIPVCF 552
           Y K++ L HS H+   N +I  TEF+GIP+ +
Sbjct: 774 YVKINDLEHSVHHWTINKEIKETEFKGIPISY 805


>AJ459824-1|CAD30871.1| 1196|Homo sapiens AHI1 protein protein.
          Length = 1196

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +1

Query: 457 YKKLDYLIHSGHYIRSNIQIWVTEFRGIPVCF 552
           Y K++ L HS H+   N +I  TEF+GIP+ +
Sbjct: 774 YVKINDLEHSVHHWTINKEIKETEFKGIPISY 805


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,586,551
Number of Sequences: 237096
Number of extensions: 2672137
Number of successful extensions: 6148
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6128
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)