BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0344
(748 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT021240-1|AAX33388.1| 827|Drosophila melanogaster RE74651p pro... 62 6e-10
AE014298-2107|AAN09655.2| 827|Drosophila melanogaster CG33968-P... 62 6e-10
AY089510-1|AAL90248.1| 697|Drosophila melanogaster GH20325p pro... 58 2e-08
AE013599-1631|AAF58428.1| 697|Drosophila melanogaster CG13325-P... 58 2e-08
AE014298-2880|AAF48977.2| 713|Drosophila melanogaster CG14205-P... 57 3e-08
AE014298-2879|AAF48976.1| 724|Drosophila melanogaster CG14219-P... 56 7e-08
AY121690-1|AAM52017.1| 724|Drosophila melanogaster RE53177p pro... 54 2e-07
AE014297-3342|AAF56149.2| 699|Drosophila melanogaster CG10182-P... 54 2e-07
AE014297-3344|AAF56150.2| 694|Drosophila melanogaster CG16723-P... 53 4e-07
AE014297-3343|AAS65196.1| 709|Drosophila melanogaster CG33337-P... 52 6e-07
AE014297-2962|AAF55871.2| 742|Drosophila melanogaster CG5892-PA... 50 4e-06
AY058329-1|AAL13558.1| 742|Drosophila melanogaster GH10201p pro... 48 1e-05
AE014298-1360|AAF46515.1| 742|Drosophila melanogaster CG3106-PA... 48 1e-05
AE014297-3345|AAF56151.2| 687|Drosophila melanogaster CG10183-P... 46 4e-05
AE014298-2878|AAF48975.1| 743|Drosophila melanogaster CG14204-P... 46 5e-05
AE014134-233|AAF51391.1| 203|Drosophila melanogaster CG14343-PA... 38 0.015
BT003480-1|AAO39483.1| 853|Drosophila melanogaster RE58242p pro... 33 0.31
AE014298-1852|AAF48232.2| 853|Drosophila melanogaster CG32645-P... 33 0.31
AY058416-1|AAL13645.1| 754|Drosophila melanogaster GH19286p pro... 30 2.9
AE014296-870|AAN11608.1| 754|Drosophila melanogaster CG11353-PB... 30 2.9
AE014296-869|AAF47917.1| 754|Drosophila melanogaster CG11353-PA... 30 2.9
X00854-2|CAA25408.1| 413|Drosophila melanogaster ftz protein pr... 29 8.9
>BT021240-1|AAX33388.1| 827|Drosophila melanogaster RE74651p
protein.
Length = 827
Score = 62.5 bits (145), Expect = 6e-10
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 16/76 (21%)
Frame = +1
Query: 244 QERHQLYMDSLDRLELWALKMFDATAKPPSGILSGNGNQYGDFDECLSI----------- 390
++ HQ ++++LD +LWALKM D++ K SGIL+GN NQ GDFD+CL I
Sbjct: 156 RQMHQ-FLNALDNFDLWALKMHDSSGKLNSGILNGNINQPGDFDQCLGIQQRMNQDQDAG 214
Query: 391 -----DAAVRGKYCLA 423
D+ +RG+YCLA
Sbjct: 215 QDQDGDSIIRGQYCLA 230
Score = 56.8 bits (131), Expect = 3e-08
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 6/66 (9%)
Frame = +3
Query: 507 YTDMGHRVPRYSSLLWGICIPSSCSSFDLE----EELSYRLSHLGIT--AKVHNTMCTVK 668
+ D GHRVPRYS + WG+C+PS CS+ D+E E L + + GIT +V MC V+
Sbjct: 260 FNDPGHRVPRYSLINWGLCVPSGCSARDVEYSVAEYLGNQTASTGITFNVRVEPQMCQVR 319
Query: 669 NVKRPY 686
+ +RP+
Sbjct: 320 D-QRPW 324
>AE014298-2107|AAN09655.2| 827|Drosophila melanogaster CG33968-PA
protein.
Length = 827
Score = 62.5 bits (145), Expect = 6e-10
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 16/76 (21%)
Frame = +1
Query: 244 QERHQLYMDSLDRLELWALKMFDATAKPPSGILSGNGNQYGDFDECLSI----------- 390
++ HQ ++++LD +LWALKM D++ K SGIL+GN NQ GDFD+CL I
Sbjct: 156 RQMHQ-FLNALDNFDLWALKMHDSSGKLNSGILNGNINQPGDFDQCLGIQQRMNQDQDAG 214
Query: 391 -----DAAVRGKYCLA 423
D+ +RG+YCLA
Sbjct: 215 QDQDGDSIIRGQYCLA 230
Score = 56.8 bits (131), Expect = 3e-08
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 6/66 (9%)
Frame = +3
Query: 507 YTDMGHRVPRYSSLLWGICIPSSCSSFDLE----EELSYRLSHLGIT--AKVHNTMCTVK 668
+ D GHRVPRYS + WG+C+PS CS+ D+E E L + + GIT +V MC V+
Sbjct: 260 FNDPGHRVPRYSLINWGLCVPSGCSARDVEYSVAEYLGNQTASTGITFNVRVEPQMCQVR 319
Query: 669 NVKRPY 686
+ +RP+
Sbjct: 320 D-QRPW 324
>AY089510-1|AAL90248.1| 697|Drosophila melanogaster GH20325p
protein.
Length = 697
Score = 57.6 bits (133), Expect = 2e-08
Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 6/61 (9%)
Frame = +1
Query: 265 MDSLDRLELWALKMFDATAKPPSGILSGNGNQYGDFDECLSI------DAAVRGKYCLAS 426
M L E WALKM DA PSG+L+GN G+FDECL+I + ++GKYC S
Sbjct: 78 MTGLGSAEYWALKMIDAWGSIPSGLLAGNSYDLGNFDECLNIRKEIGQERTIQGKYCFLS 137
Query: 427 L 429
+
Sbjct: 138 V 138
>AE013599-1631|AAF58428.1| 697|Drosophila melanogaster CG13325-PA
protein.
Length = 697
Score = 57.6 bits (133), Expect = 2e-08
Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 6/61 (9%)
Frame = +1
Query: 265 MDSLDRLELWALKMFDATAKPPSGILSGNGNQYGDFDECLSI------DAAVRGKYCLAS 426
M L E WALKM DA PSG+L+GN G+FDECL+I + ++GKYC S
Sbjct: 78 MTGLGSAEYWALKMIDAWGSIPSGLLAGNSYDLGNFDECLNIRKEIGQERTIQGKYCFLS 137
Query: 427 L 429
+
Sbjct: 138 V 138
>AE014298-2880|AAF48977.2| 713|Drosophila melanogaster CG14205-PA
protein.
Length = 713
Score = 56.8 bits (131), Expect = 3e-08
Identities = 33/63 (52%), Positives = 39/63 (61%), Gaps = 6/63 (9%)
Frame = +1
Query: 259 LYMDSLDRLELWALKMFDATAKPPSGILSGNGNQYGDFDECLSIDAA------VRGKYCL 420
L D DR +LWAL+M D+ PSGIL GN G+FDECL ID A V+GKYCL
Sbjct: 94 LAKDVSDR-KLWALRMIDSWGTFPSGILYGNVIDLGNFDECLGIDHAVTSTHNVQGKYCL 152
Query: 421 ASL 429
+ L
Sbjct: 153 SKL 155
>AE014298-2879|AAF48976.1| 724|Drosophila melanogaster CG14219-PA
protein.
Length = 724
Score = 55.6 bits (128), Expect = 7e-08
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Frame = +1
Query: 259 LYMDSLDRLELWALKMFDATAKPPSGILSGNGNQYGDFDECLSIDAAV------RGKYCL 420
L L + WALKM D+ PSG+L+GN G+FDEC++ID AV +GKYC+
Sbjct: 92 LLSKDLSSFKFWALKMIDSWGLLPSGMLAGNWWNLGNFDECIAIDHAVTSSHSIKGKYCI 151
Query: 421 ASL 429
L
Sbjct: 152 TKL 154
>AY121690-1|AAM52017.1| 724|Drosophila melanogaster RE53177p
protein.
Length = 724
Score = 54.4 bits (125), Expect = 2e-07
Identities = 32/63 (50%), Positives = 38/63 (60%), Gaps = 6/63 (9%)
Frame = +1
Query: 259 LYMDSLDRLELWALKMFDATAKPPSGILSGNGNQYGDFDECLSIDAA------VRGKYCL 420
L D DR + WAL+M D+ PSGIL GN G+FDECL ID A V+GKYCL
Sbjct: 105 LAKDVSDR-KSWALRMIDSWGTFPSGILYGNVIDLGNFDECLGIDHAVTSTHNVQGKYCL 163
Query: 421 ASL 429
+ L
Sbjct: 164 SKL 166
>AE014297-3342|AAF56149.2| 699|Drosophila melanogaster CG10182-PA
protein.
Length = 699
Score = 54.0 bits (124), Expect = 2e-07
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 6/54 (11%)
Frame = +1
Query: 286 ELWALKMFDATAKPPSGILSGNGNQYGDFDECLSID------AAVRGKYCLASL 429
+ WALKMFD+ PSG+L+GN G+FDECL+I+ ++GKYC S+
Sbjct: 85 QYWALKMFDSWGSIPSGLLTGNMYDLGNFDECLNINHGVSLGRTIQGKYCFLSV 138
>AE014297-3344|AAF56150.2| 694|Drosophila melanogaster CG16723-PA
protein.
Length = 694
Score = 53.2 bits (122), Expect = 4e-07
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +1
Query: 265 MDSLDRLELWALKMFDATAKPPSGILSGNGNQYGDFDECLSIDAAVRGK 411
M+ + E WALK+ DA P+G+L+GN G+FDECLSI+ V GK
Sbjct: 78 MNGISLRETWALKVIDAWGSIPNGLLTGNLFDLGNFDECLSIEKVVGGK 126
>AE014297-3343|AAS65196.1| 709|Drosophila melanogaster CG33337-PA
protein.
Length = 709
Score = 52.4 bits (120), Expect = 6e-07
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +1
Query: 286 ELWALKMFDATAKPPSGILSGNGNQYGDFDECLSIDA-AVRGKYC 417
+ WA KM DA PSGI +GN G+FDEC++I ++RGKYC
Sbjct: 85 QYWAFKMIDAWGGIPSGIFTGNVYDLGNFDECINIKKDSIRGKYC 129
>AE014297-2962|AAF55871.2| 742|Drosophila melanogaster CG5892-PA
protein.
Length = 742
Score = 49.6 bits (113), Expect = 4e-06
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 6/53 (11%)
Frame = +1
Query: 289 LWALKMFDATAKPPSGILSGNGNQYGDFDECLSID------AAVRGKYCLASL 429
LWA +M D+ PSGIL G+ G +DEC++I+ + + GKYCLASL
Sbjct: 95 LWAYRMIDSWGSIPSGILKGHLKDLGHYDECIAIEQSAASGSTLLGKYCLASL 147
>AY058329-1|AAL13558.1| 742|Drosophila melanogaster GH10201p
protein.
Length = 742
Score = 48.4 bits (110), Expect = 1e-05
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Frame = +1
Query: 259 LYMDSLDRLELWALKMFDATAKPPSGILSGNGNQYGDFDECLSIDAA----VRGKYCLAS 426
L DS++ LE WAL+ D + P G+ G+ G ++EC++ + +RG+YCLAS
Sbjct: 82 LIRDSINNLEEWALEFPDTWGRLPMGLFWGHTISMGQYEECVAASSTHTTEIRGQYCLAS 141
Query: 427 LII 435
L I
Sbjct: 142 LNI 144
Score = 29.9 bits (64), Expect = 3.9
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 555 GICIPSSCSSFDLEEELSYRLSH 623
GIC+P +CS+ E+ L Y ++H
Sbjct: 174 GICVPKTCSAAKTEKLLKYAITH 196
>AE014298-1360|AAF46515.1| 742|Drosophila melanogaster CG3106-PA
protein.
Length = 742
Score = 48.4 bits (110), Expect = 1e-05
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Frame = +1
Query: 259 LYMDSLDRLELWALKMFDATAKPPSGILSGNGNQYGDFDECLSIDAA----VRGKYCLAS 426
L DS++ LE WAL+ D + P G+ G+ G ++EC++ + +RG+YCLAS
Sbjct: 82 LIRDSINNLEEWALEFPDTWGRLPMGLFWGHTISMGQYEECVAASSTHTTEIRGQYCLAS 141
Query: 427 LII 435
L I
Sbjct: 142 LNI 144
Score = 29.9 bits (64), Expect = 3.9
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 555 GICIPSSCSSFDLEEELSYRLSH 623
GIC+P +CS+ E+ L Y ++H
Sbjct: 174 GICVPKTCSAAKTEKLLKYAITH 196
>AE014297-3345|AAF56151.2| 687|Drosophila melanogaster CG10183-PA
protein.
Length = 687
Score = 46.4 bits (105), Expect = 4e-05
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Frame = +1
Query: 292 WALKMFDATAKPPSGILSGNGNQYGDFDECLSID------AAVRGKYCLASL 429
WALKM D+ PSG+L G G+FDECL+I+ ++GKYC ++
Sbjct: 77 WALKMLDSWGSFPSGLLYGTFYDLGNFDECLNINQEISSSQTIKGKYCFMAV 128
>AE014298-2878|AAF48975.1| 743|Drosophila melanogaster CG14204-PA
protein.
Length = 743
Score = 46.0 bits (104), Expect = 5e-05
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Frame = +1
Query: 262 YMDSLDRLELWALKMFDATAKPPSGILSGNGNQYGDFDECLS------IDAAVRGKYCLA 423
+M +L + WALKM DA PSG L GN G++ ECLS ++GKYC
Sbjct: 86 FMSALSAPKAWALKMLDAWGTIPSGYLIGNRVDMGNYRECLSEGGMLTSSQDIQGKYCFM 145
Query: 424 SL 429
L
Sbjct: 146 EL 147
>AE014134-233|AAF51391.1| 203|Drosophila melanogaster CG14343-PA
protein.
Length = 203
Score = 37.9 bits (84), Expect = 0.015
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +1
Query: 256 QLYMDSLDRLELWALKMFDATAKPPSGILSGNGNQYGDFDECLSID 393
+L + + L AL++FDA K P G+L G+ G+++ CLS+D
Sbjct: 61 RLLLTGAEAKSLPALRVFDAWGKFPQGLLYGHFMDMGNYESCLSLD 106
>BT003480-1|AAO39483.1| 853|Drosophila melanogaster RE58242p
protein.
Length = 853
Score = 33.5 bits (73), Expect = 0.31
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 262 YMDSLDRLELWALKMFDATAKPPSGILSGNGNQYGDFDECLSID 393
Y+ L ++WA+KM DA+ SG GN G C +ID
Sbjct: 113 YLGGLSDAKMWAVKMDDASGHYTSGFFYGNNYWMGSLALCDAID 156
>AE014298-1852|AAF48232.2| 853|Drosophila melanogaster CG32645-PB
protein.
Length = 853
Score = 33.5 bits (73), Expect = 0.31
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 262 YMDSLDRLELWALKMFDATAKPPSGILSGNGNQYGDFDECLSID 393
Y+ L ++WA+KM DA+ SG GN G C +ID
Sbjct: 113 YLGGLSDAKMWAVKMDDASGHYTSGFFYGNNYWMGSLALCDAID 156
>AY058416-1|AAL13645.1| 754|Drosophila melanogaster GH19286p
protein.
Length = 754
Score = 30.3 bits (65), Expect = 2.9
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 292 WALKMFDATAKPPSGILSGNGNQYGDFDECLSIDAAV 402
WA+K+ DA+ PSG + G G + C + V
Sbjct: 120 WAMKVLDASGTKPSGFVYGQNYWLGSREACRGVQRPV 156
>AE014296-870|AAN11608.1| 754|Drosophila melanogaster CG11353-PB,
isoform B protein.
Length = 754
Score = 30.3 bits (65), Expect = 2.9
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 292 WALKMFDATAKPPSGILSGNGNQYGDFDECLSIDAAV 402
WA+K+ DA+ PSG + G G + C + V
Sbjct: 120 WAMKVLDASGTKPSGFVYGQNYWLGSREACRGVQRPV 156
>AE014296-869|AAF47917.1| 754|Drosophila melanogaster CG11353-PA,
isoform A protein.
Length = 754
Score = 30.3 bits (65), Expect = 2.9
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 292 WALKMFDATAKPPSGILSGNGNQYGDFDECLSIDAAV 402
WA+K+ DA+ PSG + G G + C + V
Sbjct: 120 WAMKVLDASGTKPSGFVYGQNYWLGSREACRGVQRPV 156
>X00854-2|CAA25408.1| 413|Drosophila melanogaster ftz protein
protein.
Length = 413
Score = 28.7 bits (61), Expect = 8.9
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 73 FDAVPRQYRAGEQCEYQTHARD 8
+DA P+QY+ +QC YQ H +D
Sbjct: 389 YDAYPQQYQ--QQCSYQQHPQD 408
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,965,757
Number of Sequences: 53049
Number of extensions: 807861
Number of successful extensions: 2327
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2319
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -