Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0344
         (748 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z32681-3|CAD88217.1|  685|Caenorhabditis elegans Hypothetical pr...    43   3e-04
Z32681-2|CAA83607.1|  687|Caenorhabditis elegans Hypothetical pr...    43   3e-04
AF173373-1|AAD51973.1|  687|Caenorhabditis elegans transmembrane...    43   3e-04
Z46676-4|CAA86669.2|  822|Caenorhabditis elegans Hypothetical pr...    42   6e-04
AF173372-1|AAD51972.1|  822|Caenorhabditis elegans transmembrane...    42   6e-04
AC006630-3|AAK68325.1|  257|Caenorhabditis elegans Hypothetical ...    29   3.5  
Z77652-2|CAB01113.1|  665|Caenorhabditis elegans Hypothetical pr...    28   8.1  
AC024770-8|AAF59486.1|  740|Caenorhabditis elegans Hypothetical ...    28   8.1  

>Z32681-3|CAD88217.1|  685|Caenorhabditis elegans Hypothetical
           protein F56F3.2b protein.
          Length = 685

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
 Frame = +1

Query: 292 WALKMFDATAKPPSGILSGNGNQYGDFDEC--LSIDAAVRGKYC 417
           W LK FD+  KP +GI  GN    GD++ C  L+ D +  G+YC
Sbjct: 112 WVLKWFDSLGKPAAGITDGNYYWLGDYELCAALASDGSFDGQYC 155


>Z32681-2|CAA83607.1|  687|Caenorhabditis elegans Hypothetical
           protein F56F3.2a protein.
          Length = 687

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
 Frame = +1

Query: 292 WALKMFDATAKPPSGILSGNGNQYGDFDEC--LSIDAAVRGKYC 417
           W LK FD+  KP +GI  GN    GD++ C  L+ D +  G+YC
Sbjct: 112 WVLKWFDSLGKPAAGITDGNYYWLGDYELCAALASDGSFDGQYC 155


>AF173373-1|AAD51973.1|  687|Caenorhabditis elegans transmembrane
           protein NDG-4 protein.
          Length = 687

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
 Frame = +1

Query: 292 WALKMFDATAKPPSGILSGNGNQYGDFDEC--LSIDAAVRGKYC 417
           W LK FD+  KP +GI  GN    GD++ C  L+ D +  G+YC
Sbjct: 112 WVLKWFDSLGKPAAGITDGNYYWLGDYELCAALASDGSFDGQYC 155


>Z46676-4|CAA86669.2|  822|Caenorhabditis elegans Hypothetical
           protein C08B11.4 protein.
          Length = 822

 Score = 41.5 bits (93), Expect = 6e-04
 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
 Frame = +1

Query: 292 WALKMFDATAKPPSGILSGNGNQYGDFDECLSIDAAV-------RGKYCLASL 429
           W   +FDA  K P+GI+SGN    G +  C  ID          +G+YCLA++
Sbjct: 153 WIFNVFDAMGKVPAGIMSGNNLWVGSWSTCRKIDVVKNAQGQKWKGQYCLATI 205


>AF173372-1|AAD51972.1|  822|Caenorhabditis elegans transmembrane
           protein NRF-6 protein.
          Length = 822

 Score = 41.5 bits (93), Expect = 6e-04
 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
 Frame = +1

Query: 292 WALKMFDATAKPPSGILSGNGNQYGDFDECLSIDAAV-------RGKYCLASL 429
           W   +FDA  K P+GI+SGN    G +  C  ID          +G+YCLA++
Sbjct: 153 WIFNVFDAMGKVPAGIMSGNNLWVGSWSTCRKIDVVKNAQGQKWKGQYCLATI 205


>AC006630-3|AAK68325.1|  257|Caenorhabditis elegans Hypothetical
           protein F14H12.3 protein.
          Length = 257

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 233 SEQCRRDTSCIWTVWTDWS 289
           S+ C     C WT W+ WS
Sbjct: 131 SQACNAQPCCTWTAWSSWS 149


>Z77652-2|CAB01113.1|  665|Caenorhabditis elegans Hypothetical
           protein C06B3.2 protein.
          Length = 665

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = +3

Query: 558 ICIPSSCSSFDLEEELSYRLSHLGITAKVHNTMCTVKNVKRPYSF 692
           +C+P SC+S D   +L  +LS L +TA    T C+ ++V +  +F
Sbjct: 160 VCMPKSCASSD-TVDLYNQLSALPLTACA--TFCSQRDVPKDSAF 201


>AC024770-8|AAF59486.1|  740|Caenorhabditis elegans Hypothetical
           protein Y39H10A.2 protein.
          Length = 740

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 292 WALKMFDATAKPPSGILSGNGNQYGDFDECLSI 390
           + + M DA  K  SGI+ G+    G F EC SI
Sbjct: 113 YLIPMMDAAGKLGSGIVRGHILSTGAFSECKSI 145


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,261,543
Number of Sequences: 27780
Number of extensions: 406508
Number of successful extensions: 1263
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1262
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)