Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0344
(748 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g24930.1 68415.m02981 Ulp1 protease family protein contains P... 31 0.81
At4g12720.3 68417.m01998 MutT/nudix family protein similar to SP... 30 1.9
At4g12720.2 68417.m01997 MutT/nudix family protein similar to SP... 30 1.9
At4g12720.1 68417.m01996 MutT/nudix family protein similar to SP... 30 1.9
At2g47430.1 68415.m05920 cytokinin-responsive histidine kinase (... 29 3.3
At5g64110.1 68418.m08051 peroxidase, putative similar to peroxid... 29 4.3
At1g72270.1 68414.m08355 expressed protein 29 4.3
At5g05900.1 68418.m00651 UDP-glucoronosyl/UDP-glucosyl transfera... 28 5.7
At4g23130.2 68417.m03334 receptor-like protein kinase 6 (RLK6) i... 28 5.7
At4g23130.1 68417.m03333 receptor-like protein kinase 6 (RLK6) i... 28 5.7
At1g14280.1 68414.m01693 phytochrome kinase, putative contains s... 28 5.7
At3g58610.1 68416.m06532 ketol-acid reductoisomerase identical t... 28 7.6
At2g46490.1 68415.m05786 expressed protein (APS2) identical to c... 27 10.0
At1g53760.1 68414.m06117 expressed protein 27 10.0
>At2g24930.1 68415.m02981 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 926
Score = 31.1 bits (67), Expect = 0.81
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -2
Query: 582 YCTSLGCRCPKADWNTAELCDPYLYITPDIMSAV 481
Y +GC P++D E C P+ + P IMS +
Sbjct: 810 YDCIVGCHTPESDGKIQEYCRPFTRMIPQIMSEI 843
>At4g12720.3 68417.m01998 MutT/nudix family protein similar to
SP|P53370 Nucleoside diphosphate-linked moiety X motif 6
{Homo sapiens}; contains Pfam profile PF00293: NUDIX
domain
Length = 282
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = -3
Query: 404 RTAASMLRHSSKSPYWFPLPLSMPDGGLAVASNIFKAHNSSRSKLSIYSW 255
R + S R K W LPL + + A S F+ H++ L + SW
Sbjct: 39 RASLSHWREEGKKGIWIKLPLGLANLVEAAVSEGFRYHHAEPEYLMLVSW 88
>At4g12720.2 68417.m01997 MutT/nudix family protein similar to
SP|P53370 Nucleoside diphosphate-linked moiety X motif 6
{Homo sapiens}; contains Pfam profile PF00293: NUDIX
domain
Length = 282
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = -3
Query: 404 RTAASMLRHSSKSPYWFPLPLSMPDGGLAVASNIFKAHNSSRSKLSIYSW 255
R + S R K W LPL + + A S F+ H++ L + SW
Sbjct: 39 RASLSHWREEGKKGIWIKLPLGLANLVEAAVSEGFRYHHAEPEYLMLVSW 88
>At4g12720.1 68417.m01996 MutT/nudix family protein similar to
SP|P53370 Nucleoside diphosphate-linked moiety X motif 6
{Homo sapiens}; contains Pfam profile PF00293: NUDIX
domain
Length = 282
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = -3
Query: 404 RTAASMLRHSSKSPYWFPLPLSMPDGGLAVASNIFKAHNSSRSKLSIYSW 255
R + S R K W LPL + + A S F+ H++ L + SW
Sbjct: 39 RASLSHWREEGKKGIWIKLPLGLANLVEAAVSEGFRYHHAEPEYLMLVSW 88
>At2g47430.1 68415.m05920 cytokinin-responsive histidine kinase
(CKI1) identical to GB:D87545
Length = 1122
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 534 RYSSLLWGICIPSSCSSFDLEEEL 605
R S+ LW CIP +CSS E E+
Sbjct: 278 RESNSLWSQCIPENCSSSGYEVEI 301
>At5g64110.1 68418.m08051 peroxidase, putative similar to peroxidase
ATP3a [Arabidopsis thaliana] gi|1546698|emb|CAA67340
Length = 330
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -3
Query: 398 AASMLRHSSKSPYWFPLPLSMPDGGLAVASNI 303
AA H + P+W P+PL DG +++ASN+
Sbjct: 132 AARDFVHLAGGPWW-PVPLGRLDGRISLASNV 162
>At1g72270.1 68414.m08355 expressed protein
Length = 2777
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 150 IRSLRVPGLILCSCGRDSRRLL-CLGTVLVNSAGETPA 260
I L++ G++LC CG+DS L L L+ S G TP+
Sbjct: 2057 IEILKILGVLLCKCGKDSGIFLKDLHFRLLCSYGATPS 2094
>At5g05900.1 68418.m00651 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 450
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -1
Query: 349 CRSVCQTGAWPLRQTFSKPITPVGPNCPYTAGVSPALFT 233
C + Q R+ + PI +GP+ Y G S +LFT
Sbjct: 217 CEELDQDSLSQAREDYQVPIFTIGPSHSYFPGSSSSLFT 255
>At4g23130.2 68417.m03334 receptor-like protein kinase 6 (RLK6)
identical to receptor-like protein kinase 6 [Arabidopsis
thaliana] GI:13506749; contains Pfam domain PF00069:
Protein kinase domain
Length = 663
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 62 DCIELTISDKRIITETILNSTILKFQHENDTVVESSRFN 178
+C+ L SD+ I +T+ +TI+ + + T +S RFN
Sbjct: 122 ECM-LGYSDRNIFMDTVTTTTIITWNTQKVTADQSDRFN 159
>At4g23130.1 68417.m03333 receptor-like protein kinase 6 (RLK6)
identical to receptor-like protein kinase 6 [Arabidopsis
thaliana] GI:13506749; contains Pfam domain PF00069:
Protein kinase domain
Length = 659
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 62 DCIELTISDKRIITETILNSTILKFQHENDTVVESSRFN 178
+C+ L SD+ I +T+ +TI+ + + T +S RFN
Sbjct: 122 ECM-LGYSDRNIFMDTVTTTTIITWNTQKVTADQSDRFN 159
>At1g14280.1 68414.m01693 phytochrome kinase, putative contains
similarity to Swiss-Prot:Q9SWI1 phytochrome kinase
substrate 1 [Arabidopsis thaliana]
Length = 442
Score = 28.3 bits (60), Expect = 5.7
Identities = 8/23 (34%), Positives = 17/23 (73%)
Frame = -2
Query: 588 RSYCTSLGCRCPKADWNTAELCD 520
+S+ +LGCRC ++W++ ++ D
Sbjct: 176 KSFLATLGCRCVCSNWSSVDVVD 198
>At3g58610.1 68416.m06532 ketol-acid reductoisomerase identical to
ketol-acid reductoisomerase, chloroplast precursor (EC
1.1.1.86) (Acetohydroxy-acid reductoisomerase)
(Alpha-keto-beta-hydroxylacil reductoisomerase)
(Swiss-Prot:Q05758) [Arabidopsis thaliana]
Length = 591
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -1
Query: 355 FHCRSVCQTGAWPL--RQTFSKPITPVGPNCPYTAGVSPALFTSTV 224
F ++ QT W + R S+P +GP P+TAGV AL + +
Sbjct: 425 FPMGNIDQTRMWKVGERVRKSRPAGDLGPLYPFTAGVYVALMMAQI 470
>At2g46490.1 68415.m05786 expressed protein (APS2) identical to cDNA
Aps2, partial cds GI:4519894
Length = 134
Score = 27.5 bits (58), Expect = 10.0
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -3
Query: 404 RTAASMLRHSSKSPYWFPLPLSMPDGGLAVASNIFKAHNSSRSKLSIYS 258
R S RH S FP+ S +G + +A N+F + +SS + S+ S
Sbjct: 49 RRPPSCRRHGSSESISFPIRRSWSEGNI-MAMNLFSSSSSSSNLQSLSS 96
>At1g53760.1 68414.m06117 expressed protein
Length = 272
Score = 27.5 bits (58), Expect = 10.0
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 257 WCLSCTVH*YRS*AQQPSGISPTTAQ 180
WC S +V + AQ PSG++PTT +
Sbjct: 15 WCFSRSVDPFA--AQSPSGVTPTTVR 38
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,218,261
Number of Sequences: 28952
Number of extensions: 378704
Number of successful extensions: 1074
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1653386488
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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