Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0343
         (776 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6ECR4 Cluster: Alpha-mannosidase; n=1; Pedobacter sp. ...    34   3.4  
UniRef50_UPI00006CD063 Cluster: conserved hypothetical protein; ...    33   8.0  
UniRef50_P70665 Cluster: Sialate O-acetylesterase precursor (EC ...    33   8.0  

>UniRef50_A6ECR4 Cluster: Alpha-mannosidase; n=1; Pedobacter sp.
           BAL39|Rep: Alpha-mannosidase - Pedobacter sp. BAL39
          Length = 879

 Score = 34.3 bits (75), Expect = 3.4
 Identities = 18/60 (30%), Positives = 28/60 (46%)
 Frame = +1

Query: 235 PDISWQDTCKWNHNSLITNVRNQGREFTRKNPANFCL*NAAVYLLYYIERDYHPMTVSTT 414
           P  +W+     N    +T   N G     KNP   CL +A  Y   ++++D++  TV TT
Sbjct: 204 PGSTWETMASTNSKEYVTAALNDGI----KNPVGMCLQDAGWYFGPWLKKDFYQPTVYTT 259


>UniRef50_UPI00006CD063 Cluster: conserved hypothetical protein;
           n=1; Tetrahymena thermophila SB210|Rep: conserved
           hypothetical protein - Tetrahymena thermophila SB210
          Length = 737

 Score = 33.1 bits (72), Expect = 8.0
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +1

Query: 181 CYYQLVPYKLNNSLYYSFPDISW--QDTCKWNHNSLITNVRNQGREFTRKNPANF 339
           C +  V  +  N   Y F  + +  Q+ CKW++  ++  +R Q R+F  K P N+
Sbjct: 131 CLFIFVEVQARNQQIYQFNFLHYKKQEFCKWDNKPIMMQIRFQMRQFV-KYPVNY 184


>UniRef50_P70665 Cluster: Sialate O-acetylesterase precursor (EC
           3.1.1.53) (Sialic acid-specific 9-O-acetylesterase)
           (Yolk sac protein 2) [Contains: Sialate O-
           acetylesterase small subunit; Sialate O-acetylesterase
           large subunit]; n=9; Euarchontoglires|Rep: Sialate
           O-acetylesterase precursor (EC 3.1.1.53) (Sialic
           acid-specific 9-O-acetylesterase) (Yolk sac protein 2)
           [Contains: Sialate O- acetylesterase small subunit;
           Sialate O-acetylesterase large subunit] - Mus musculus
           (Mouse)
          Length = 541

 Score = 33.1 bits (72), Expect = 8.0
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +1

Query: 184 YYQLVPYKLNNSLYYSFPDISWQDTCKWNH 273
           + QL  Y L NS  Y FP+I W  T  + H
Sbjct: 346 FVQLSSYMLKNSSDYGFPEIRWHQTADFGH 375


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 643,059,531
Number of Sequences: 1657284
Number of extensions: 12475854
Number of successful extensions: 21915
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21903
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65438977305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)