Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0343
         (776 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370038-1|ABD18599.1|  122|Anopheles gambiae putative TIL domai...    25   2.6  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    25   3.5  
AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        24   4.6  

>DQ370038-1|ABD18599.1|  122|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 122

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -2

Query: 271 DSIYTCPAKICPERNNIGCY 212
           D  +  PA++C ++ NIGC+
Sbjct: 42  DICFEPPAELCDKKCNIGCF 61


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 775 DLDQVLKLHFNLTTLAGTR 719
           D++  LK HF +TTL   R
Sbjct: 640 DIENTLKRHFKITTLGDVR 658


>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +1

Query: 217 SLYYSFPDISWQD 255
           +LY SF D++WQD
Sbjct: 344 TLYVSFRDLNWQD 356


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 699,034
Number of Sequences: 2352
Number of extensions: 14092
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)