Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0342
         (762 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   2.0  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   2.7  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.7  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   6.1  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   6.1  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   8.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.1  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 20/86 (23%), Positives = 34/86 (39%)
 Frame = -3

Query: 676 TNITHEHRPDPAPAHPLPVQTRHAPVLRANPYSEVTDPICRLPLPTLFYRLEALHLETCC 497
           T I+      PA A P    +  +P   A+  S  + P+  +P     Y  E + +    
Sbjct: 20  TPISSSGMTSPAAAPPPATTSSGSP---ASVASNASAPL-HIPAKRAAYDCEGV-IRHHG 74

Query: 496 GYGYEPARHLHVHPSPEFSRSAESIR 419
            + Y P  H   +P+P +   A+  R
Sbjct: 75  QWNYSPDNHFEQYPNPTYYNLADPAR 100


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = -2

Query: 365 RIPWNSNAQAEKKTLPGPLGGVFRPLWVTPSNTRF*REGTI 243
           +IPW+ NA+A  K   G  G      W+    T+   EG I
Sbjct: 330 QIPWDKNAEALAKWANGQTGFP----WIDAIMTQLREEGWI 366


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 447 NFQGPQRVSGHRRKC 403
           NF GP R++   R+C
Sbjct: 601 NFHGPHRLAARSRRC 615


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 447 NFQGPQRVSGHRRKC 403
           NF GP R++   R+C
Sbjct: 493 NFHGPHRLAARSRRC 507


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
 Frame = -3

Query: 460 HPSPEFSRSAESIRTPPQMRCSSRSE-----PYLPSIGFH 356
           HP    S+ + +   PPQ+  + R E     P +P + F+
Sbjct: 217 HPDSPNSKKSATPSPPPQLEVNERKENLTCQPAVPYVPFY 256


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
 Frame = -3

Query: 673 NITHEHRPDPAP-AHPLPVQTRHAPVLRANPYS 578
           N++HE         HPL + + H  +L  NP S
Sbjct: 321 NMSHEELSAMVNRCHPLSLSSDHQAMLHHNPMS 353


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 13/59 (22%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = -2

Query: 632 SASRPNPTR---PGPQSQSLFRSYGSNLPTSLTYIILSTRGSSP*DLLRIWVRTGATSP 465
           S+ RP  ++   PG ++  + R+  + +  ++  I++    S+P  L ++W      SP
Sbjct: 236 SSLRPRSSQKSAPGKRTPLISRAKINTVKQTIAVIVMYIACSTPFILAQLWATWDPQSP 294


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 659  TSTRPGTGASASRPNPT 609
            T+TRP T ++ +RP  T
Sbjct: 1061 TTTRPTTTSTTTRPTTT 1077


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,507
Number of Sequences: 336
Number of extensions: 4397
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)