Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0342
         (762 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        26   1.5  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   3.4  
AJ130950-1|CAA10259.1|  114|Anopheles gambiae SG2 protein protein.     25   3.4  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    25   3.4  

>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -1

Query: 327 NSSRTSRRRLQATL 286
           NSSRT+ RRLQATL
Sbjct: 350 NSSRTAIRRLQATL 363


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +3

Query: 153 IIFKNNEK*RPLSERESGSYSGTRQRNRF 239
           IIF  N +   + ER  GS+S   +RN F
Sbjct: 37  IIFVRNNRALLIYERMGGSWSEVHKRNNF 65


>AJ130950-1|CAA10259.1|  114|Anopheles gambiae SG2 protein protein.
          Length = 114

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 18/42 (42%), Positives = 21/42 (50%)
 Frame = -2

Query: 317 GPLGGVFRPLWVTPSNTRF*REGTIIETVPLPGSGIGTGFPF 192
           G   G F P +  PS T F    T I  +P  G+G G GFPF
Sbjct: 74  GGSSGAF-PQFSIPSWTNFTDAFTSI--LPFFGNGQGGGFPF 112


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -1

Query: 636 RIRFPSKPDTPRSSEPILIPKLRIQFADFPYL 541
           R+R  +   TP+    +++PKL+ + A  P+L
Sbjct: 5   RLRLITSFGTPQDKRTMVLPKLKDETAVMPFL 36


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 836,926
Number of Sequences: 2352
Number of extensions: 18224
Number of successful extensions: 266
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 266
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)