Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0341
         (327 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    24   0.47 
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   1.9  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   2.5  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   3.3  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   4.3  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    20   5.7  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       20   7.6  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 0.47
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
 Frame = -1

Query: 252 DNKPFGYPFDRPVLP-----QYFKQPNMFFKKVLV 163
           D +  GYPFDR         Q F  PNM  ++V++
Sbjct: 635 DRRSMGYPFDRMPRDGVDTLQQFLTPNMRVQEVVI 669


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 252 DNKPFGYPFDR 220
           D +  GYPFDR
Sbjct: 636 DRRSMGYPFDR 646


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -2

Query: 299 YEPTPKESEPFKSVVRTTNHSVIHS 225
           Y   P ES PF ++   T+H  I S
Sbjct: 157 YSRHPYESWPFNTMSGATHHGGIKS 181


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 6/21 (28%), Positives = 14/21 (66%)
 Frame = -1

Query: 186 MFFKKVLVYHEGELFPYLFNI 124
           ++F +++VY    + P L+N+
Sbjct: 333 LYFCRIMVYLNSAINPILYNL 353


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 272 PFKSVVRTTNHSVIHSI 222
           P    + TTNH+++ S+
Sbjct: 307 PIPDHMNTTNHAIVQSL 323


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 296 EPTPKESEPFKSV 258
           +P PKE  PF +V
Sbjct: 475 DPNPKEKTPFINV 487


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 19.8 bits (39), Expect = 7.6
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 237 GYPFDRPVLPQYFKQPN 187
           GYP     LP++F  P+
Sbjct: 23  GYPASVQPLPRHFNPPS 39


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,677
Number of Sequences: 336
Number of extensions: 1585
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6261139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)