Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0340
         (717 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    24   1.4  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   5.7  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   7.6  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
 Frame = -1

Query: 252 DNKPFGYPFDRPVLP-----QYFKQPNMFFKKVLV 163
           D +  GYPFDR         Q F  PNM  ++V++
Sbjct: 635 DRRSMGYPFDRMPRDGVDTLQQFLTPNMRVQEVVI 669


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 252 DNKPFGYPFDR 220
           D +  GYPFDR
Sbjct: 636 DRRSMGYPFDR 646


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -2

Query: 299 YEPTPKESEPFKSVVRTTNHSVIHS 225
           Y   P ES PF ++   T+H  I S
Sbjct: 157 YSRHPYESWPFNTMSGATHHGGIKS 181


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,385
Number of Sequences: 336
Number of extensions: 3721
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)