Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0337
         (729 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CFA43 Cluster: Chitin synthase family protein; ...    33   7.2  
UniRef50_UPI000038DFBA Cluster: hypothetical protein Faci_030015...    33   9.5  
UniRef50_Q4Y503 Cluster: Putative uncharacterized protein; n=1; ...    33   9.5  

>UniRef50_UPI00006CFA43 Cluster: Chitin synthase family protein;
           n=1; Tetrahymena thermophila SB210|Rep: Chitin synthase
           family protein - Tetrahymena thermophila SB210
          Length = 1312

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 13/36 (36%), Positives = 24/36 (66%)
 Frame = -2

Query: 203 YSFYFMI*RCIHLIHGSFYIPYHVLFSCMYVCILEI 96
           +SF+F +   I +I+ + Y+ Y +LF C++ CI +I
Sbjct: 622 FSFFFFL--PIQIIYFTLYLIYFILFKCVFKCIFKI 655


>UniRef50_UPI000038DFBA Cluster: hypothetical protein Faci_03001523;
           n=2; Ferroplasma acidarmanus fer1|Rep: hypothetical
           protein Faci_03001523 - Ferroplasma acidarmanus fer1
          Length = 387

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = +2

Query: 95  KFPKYIHTYMKIAHGMECKNFHGLNVYTFKS*NKNCNILLMS 220
           +F + I  Y  I  G+E    + +N+YT+   N NCNI+L++
Sbjct: 51  EFLRIIKKYKNIKLGIESTGIYHVNLYTYLI-NNNCNIILLN 91


>UniRef50_Q4Y503 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 247

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 22/78 (28%), Positives = 33/78 (42%)
 Frame = +2

Query: 104 KYIHTYMKIAHGMECKNFHGLNVYTFKS*NKNCNILLMSIKWLINFITL*CKLPGNDKMF 283
           KY+HTY K+ H +EC   + +     ++  K C     S   L N  TL      +D + 
Sbjct: 44  KYMHTYCKVLHIIECNYLYKIKYNIIQNSLKTCASQYKSSN-LYNHKTLPYSQKWDDNII 102

Query: 284 *SRNSSIHKFFQYLSTFN 337
               S+ + F  Y   FN
Sbjct: 103 YDIISNSNYFCNYFELFN 120


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 584,161,301
Number of Sequences: 1657284
Number of extensions: 10808184
Number of successful extensions: 23212
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23193
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)