Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0336
         (720 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        26   1.4  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    25   3.1  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    24   4.1  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    24   4.1  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    24   4.1  
AJ130950-1|CAA10259.1|  114|Anopheles gambiae SG2 protein protein.     23   7.2  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   7.2  
DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    23   9.5  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   9.5  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   9.5  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   9.5  

>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -1

Query: 138 NSSRTSRRRLQATL 97
           NSSRT+ RRLQATL
Sbjct: 350 NSSRTAIRRLQATL 363


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -1

Query: 447 RIRFPSKPDTPRSSEPILIPKLRIQFADFPYL 352
           R+R  +   TP+    +++PKL+ + A  P+L
Sbjct: 5   RLRLITSFGTPQDKRTMVLPKLKDETAVMPFL 36


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 399 LALRTGACRVWTGSGCGRCRVWSM 470
           +++  G   V  G+ C  C VWSM
Sbjct: 5   ISVHVGQAGVQIGNPCWDCTVWSM 28


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -3

Query: 463 QTRHRPHPLPVQTRHAPVLRANPYSEVT 380
           Q  H PH    Q +H P   + P++ V+
Sbjct: 72  QLHHSPHQYHQQVQHQPQPPSTPFANVS 99


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -3

Query: 463 QTRHRPHPLPVQTRHAPVLRANPYSEVT 380
           Q  H PH    Q +H P   + P++ V+
Sbjct: 73  QLHHSPHQYHQQVQHQPQPPSTPFANVS 100


>AJ130950-1|CAA10259.1|  114|Anopheles gambiae SG2 protein protein.
          Length = 114

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -3

Query: 121 SAASSGHFGLPRRTLVFKDEGTIIETVPLPGSGIGTGFPF 2
           S+ +   F +P  T  F D  T I  +P  G+G G GFPF
Sbjct: 76  SSGAFPQFSIPSWTN-FTDAFTSI--LPFFGNGQGGGFPF 112


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -1

Query: 687 PLNGGRTESCRSRTKRNR 634
           P +GGR  SCRS   R R
Sbjct: 262 PRSGGRWPSCRSPPARRR 279


>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = +1

Query: 226 VSGYSLRTLKFR*GMYVEMSRRFVPISAAGLQGEE 330
           + GYS+RT +FR   +++ +  +     + + GEE
Sbjct: 455 IMGYSMRTDRFRYTAWIKFNPDYFKRDWSTIYGEE 489


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = -1

Query: 297 YEPARHLHVHPSPEFQGPQRVSGHRRKCGA 208
           ++   H   H +    GP  +S  R  CGA
Sbjct: 655 HQGQHHAQHHSNGTHHGPSLMSSARESCGA 684


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -2

Query: 200 FRTISPFYRIPWNSNAQAEKKTLPGPLGGVFRPLWVTPSN 81
           F T+   Y    N+ A +   T  G   G FRP+  TP N
Sbjct: 213 FNTLDTVYMFR-NATAPSIFPTEVGSSSGRFRPILWTPEN 251


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -2

Query: 200 FRTISPFYRIPWNSNAQAEKKTLPGPLGGVFRPLWVTPSN 81
           F T+   Y    N+ A +   T  G   G FRP+  TP N
Sbjct: 213 FNTLDTVYMFR-NATAPSIFPTEVGSSSGRFRPILWTPEN 251


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 817,552
Number of Sequences: 2352
Number of extensions: 17817
Number of successful extensions: 50
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)