Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0333
         (737 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001662-1|AAN71417.1|  181|Drosophila melanogaster RE47391p pro...    32   0.71 
AE014297-1159|AAN13476.1|  181|Drosophila melanogaster CG31394-P...    32   0.71 
BT025924-1|ABG02168.1|  496|Drosophila melanogaster IP12271p pro...    31   1.6  
AE013599-809|AAM68814.1|  494|Drosophila melanogaster CG30345-PA...    31   1.6  

>BT001662-1|AAN71417.1|  181|Drosophila melanogaster RE47391p
           protein.
          Length = 181

 Score = 32.3 bits (70), Expect = 0.71
 Identities = 16/30 (53%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
 Frame = -2

Query: 442 GWWCLPARTYKRSY---HLYIYICIPVYMY 362
           GW C   R  KR Y   HLYIYI I  Y+Y
Sbjct: 10  GWGCETKRLKKRVYICIHLYIYIYIYTYLY 39


>AE014297-1159|AAN13476.1|  181|Drosophila melanogaster CG31394-PA
           protein.
          Length = 181

 Score = 32.3 bits (70), Expect = 0.71
 Identities = 16/30 (53%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
 Frame = -2

Query: 442 GWWCLPARTYKRSY---HLYIYICIPVYMY 362
           GW C   R  KR Y   HLYIYI I  Y+Y
Sbjct: 10  GWGCETKRLKKRVYICIHLYIYIYIYTYLY 39


>BT025924-1|ABG02168.1|  496|Drosophila melanogaster IP12271p
           protein.
          Length = 496

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 17/57 (29%), Positives = 32/57 (56%)
 Frame = -1

Query: 473 THYLFTAEIGRVVVPTRADLQEVLPPVYIYLYTCIYVSRDDTIFGLFIFVIKGLFYL 303
           +H   ++E+G++   T + LQ + P     LYT +Y +  +   G+F F+  GL++L
Sbjct: 415 SHVTPSSELGKIFSLTTS-LQSISPLGAAPLYTAVYQATVNFYPGIFNFISVGLYFL 470


>AE013599-809|AAM68814.1|  494|Drosophila melanogaster CG30345-PA
           protein.
          Length = 494

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 17/57 (29%), Positives = 32/57 (56%)
 Frame = -1

Query: 473 THYLFTAEIGRVVVPTRADLQEVLPPVYIYLYTCIYVSRDDTIFGLFIFVIKGLFYL 303
           +H   ++E+G++   T + LQ + P     LYT +Y +  +   G+F F+  GL++L
Sbjct: 413 SHVTPSSELGKIFSLTTS-LQSISPLGAAPLYTAVYQATVNFYPGIFNFISVGLYFL 468


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,266,744
Number of Sequences: 53049
Number of extensions: 636460
Number of successful extensions: 1415
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1406
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)