Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0332
         (728 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC130290-1|AAI30291.1|  660|Homo sapiens fibronectin leucine ric...    31   4.2  
BC126249-1|AAI26250.1|  660|Homo sapiens fibronectin leucine ric...    31   4.2  
AY358287-1|AAQ88654.1|  660|Homo sapiens FLRT2 protein.                31   4.2  
AF169676-1|AAF28460.1|  660|Homo sapiens leucine-rich repeat tra...    31   4.2  
AB007865-1|BAA23701.2|  706|Homo sapiens KIAA0405 protein.             31   4.2  

>BC130290-1|AAI30291.1|  660|Homo sapiens fibronectin leucine rich
           transmembrane protein 2 protein.
          Length = 660

 Score = 31.1 bits (67), Expect = 4.2
 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
 Frame = +1

Query: 157 LAIHLIYPQTKHVIHTRSEPAKQIDRLSV*NRQ*MWLLFGIFSQIT-LKTILKKKNNGFV 333
           + ++L   Q  H+  T     ++++RL + N Q   L  G+F  ++ LK +  + N  F 
Sbjct: 255 IRLYLQDNQINHIPLTAFSNLRKLERLDISNNQLRMLTQGVFDNLSNLKQLTARNNPWF- 313

Query: 334 IISKAQCKCAWVIYWM 381
                 C   WV  W+
Sbjct: 314 ----CDCSIKWVTEWL 325


>BC126249-1|AAI26250.1|  660|Homo sapiens fibronectin leucine rich
           transmembrane protein 2 protein.
          Length = 660

 Score = 31.1 bits (67), Expect = 4.2
 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
 Frame = +1

Query: 157 LAIHLIYPQTKHVIHTRSEPAKQIDRLSV*NRQ*MWLLFGIFSQIT-LKTILKKKNNGFV 333
           + ++L   Q  H+  T     ++++RL + N Q   L  G+F  ++ LK +  + N  F 
Sbjct: 255 IRLYLQDNQINHIPLTAFSNLRKLERLDISNNQLRMLTQGVFDNLSNLKQLTARNNPWF- 313

Query: 334 IISKAQCKCAWVIYWM 381
                 C   WV  W+
Sbjct: 314 ----CDCSIKWVTEWL 325


>AY358287-1|AAQ88654.1|  660|Homo sapiens FLRT2 protein.
          Length = 660

 Score = 31.1 bits (67), Expect = 4.2
 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
 Frame = +1

Query: 157 LAIHLIYPQTKHVIHTRSEPAKQIDRLSV*NRQ*MWLLFGIFSQIT-LKTILKKKNNGFV 333
           + ++L   Q  H+  T     ++++RL + N Q   L  G+F  ++ LK +  + N  F 
Sbjct: 255 IRLYLQDNQINHIPLTAFSNLRKLERLDISNNQLRMLTQGVFDNLSNLKQLTARNNPWF- 313

Query: 334 IISKAQCKCAWVIYWM 381
                 C   WV  W+
Sbjct: 314 ----CDCSIKWVTEWL 325


>AF169676-1|AAF28460.1|  660|Homo sapiens leucine-rich repeat
           transmembrane protein FLRT2 protein.
          Length = 660

 Score = 31.1 bits (67), Expect = 4.2
 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
 Frame = +1

Query: 157 LAIHLIYPQTKHVIHTRSEPAKQIDRLSV*NRQ*MWLLFGIFSQIT-LKTILKKKNNGFV 333
           + ++L   Q  H+  T     ++++RL + N Q   L  G+F  ++ LK +  + N  F 
Sbjct: 255 IRLYLQDNQINHIPLTAFSNLRKLERLDISNNQLRMLTQGVFDNLSNLKQLTARNNPWF- 313

Query: 334 IISKAQCKCAWVIYWM 381
                 C   WV  W+
Sbjct: 314 ----CDCSIKWVTEWL 325


>AB007865-1|BAA23701.2|  706|Homo sapiens KIAA0405 protein.
          Length = 706

 Score = 31.1 bits (67), Expect = 4.2
 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
 Frame = +1

Query: 157 LAIHLIYPQTKHVIHTRSEPAKQIDRLSV*NRQ*MWLLFGIFSQIT-LKTILKKKNNGFV 333
           + ++L   Q  H+  T     ++++RL + N Q   L  G+F  ++ LK +  + N  F 
Sbjct: 301 IRLYLQDNQINHIPLTAFSNLRKLERLDISNNQLRMLTQGVFDNLSNLKQLTARNNPWF- 359

Query: 334 IISKAQCKCAWVIYWM 381
                 C   WV  W+
Sbjct: 360 ----CDCSIKWVTEWL 371


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,347,413
Number of Sequences: 237096
Number of extensions: 1858941
Number of successful extensions: 2861
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2861
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)