Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0332
         (728 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094828-1|AAM11181.1| 1765|Drosophila melanogaster LD40380p pro...    30   2.8  
AY089325-1|AAL90063.1|  263|Drosophila melanogaster AT13643p pro...    30   2.8  
AE014297-3524|AAF56278.2| 2232|Drosophila melanogaster CG31132-P...    30   2.8  
AE013599-2248|AAF58016.1| 1087|Drosophila melanogaster CG3896-PA...    29   4.9  

>AY094828-1|AAM11181.1| 1765|Drosophila melanogaster LD40380p protein.
          Length = 1765

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -1

Query: 539  YITLLKKEPARSTKSKTADARVNERPARR*HRAPQN 432
            Y++     P R  K+ ++ A   ERP RR  R P N
Sbjct: 1614 YVSPSNGRPRRKAKTSSSSATTQERPLRRTRRPPSN 1649


>AY089325-1|AAL90063.1|  263|Drosophila melanogaster AT13643p
           protein.
          Length = 263

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -1

Query: 539 YITLLKKEPARSTKSKTADARVNERPARR*HRAPQN 432
           Y++     P R  K+ ++ A   ERP RR  R P N
Sbjct: 147 YVSPSNGRPRRKAKTSSSSATTQERPLRRTRRPPSN 182


>AE014297-3524|AAF56278.2| 2232|Drosophila melanogaster CG31132-PA
            protein.
          Length = 2232

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -1

Query: 539  YITLLKKEPARSTKSKTADARVNERPARR*HRAPQN 432
            Y++     P R  K+ ++ A   ERP RR  R P N
Sbjct: 2081 YVSPSNGRPRRKAKTSSSSATTQERPLRRTRRPPSN 2116


>AE013599-2248|AAF58016.1| 1087|Drosophila melanogaster CG3896-PA
           protein.
          Length = 1087

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 5/34 (14%)
 Frame = +1

Query: 298 KTILKKKNNGFVIISKA--QC---KCAWVIYWML 384
           + I  + +NGFVII++A  QC    CAWV+  ML
Sbjct: 287 RAIQYRASNGFVIIARACGQCLNFNCAWVLVLML 320


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,554,054
Number of Sequences: 53049
Number of extensions: 594304
Number of successful extensions: 1018
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)