Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0330
         (705 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6H5D4 Cluster: Peroxisomal membrane protein; n=1; Kluy...    37   0.42 
UniRef50_Q8I5I2 Cluster: Putative uncharacterized protein; n=3; ...    34   3.0  
UniRef50_Q3U0N9 Cluster: Activated spleen cDNA, RIKEN full-lengt...    34   3.9  
UniRef50_Q8IBJ2 Cluster: Putative uncharacterized protein MAL7P1...    34   3.9  
UniRef50_Q7RPQ7 Cluster: 4-hydroxybenzoate octaprenyltransferase...    34   3.9  
UniRef50_Q4Z0M0 Cluster: Guanylyl cyclase, putative; n=1; Plasmo...    34   3.9  
UniRef50_A0CUM3 Cluster: Chromosome undetermined scaffold_28, wh...    33   5.2  
UniRef50_Q8D2K6 Cluster: 4-diphosphocytidyl-2-C-methyl-D-erythri...    33   6.8  

>UniRef50_A6H5D4 Cluster: Peroxisomal membrane protein; n=1;
           Kluyveromyces waltii|Rep: Peroxisomal membrane protein -
           Kluyveromyces waltii (Yeast)
          Length = 222

 Score = 37.1 bits (82), Expect = 0.42
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = +3

Query: 183 FVNVIHKMVRVQKVLYQNNDLYMVELKKNIVFINILLCYS 302
           F++++HK++R+Q + Y N+D Y   +  +I F N  L Y+
Sbjct: 130 FLSLLHKLLRIQAIPYTNSDFYQNSVNASIEFQNTQLLYN 169


>UniRef50_Q8I5I2 Cluster: Putative uncharacterized protein; n=3;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium falciparum (isolate 3D7)
          Length = 4494

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 18/70 (25%), Positives = 40/70 (57%)
 Frame = -2

Query: 353  FGRQLSIMILKLSKNLKRITQ*NVNKYNVFF*LNHV*VIILVQDFLYSHHFMYYIYKVVI 174
            F   ++  +L+L KN + I + N N YN+    NH+  I  +Q+ +Y++ + Y+I+   +
Sbjct: 3311 FHSSINSFLLRL-KN-EYIKRKNKNLYNLIKKKNHIYKIEYIQNVIYTNKYTYFIFSCFV 3368

Query: 173  VSYLYVLQLI 144
               + ++++I
Sbjct: 3369 YPVIQIIRVI 3378


>UniRef50_Q3U0N9 Cluster: Activated spleen cDNA, RIKEN full-length
           enriched library, clone:F830043A20 product:hypothetical
           Tyrosine-rich region profile containing protein, full
           insert sequence; n=1; Mus musculus|Rep: Activated spleen
           cDNA, RIKEN full-length enriched library,
           clone:F830043A20 product:hypothetical Tyrosine-rich
           region profile containing protein, full insert sequence
           - Mus musculus (Mouse)
          Length = 225

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = -1

Query: 273 QCFFLTQPCISHYFGTRLFVLAPFYVLHLQSSNCKLFVCVTAHYQF 136
           QC   T   + H +GT   +   + V H+  + CKL+   T H+ +
Sbjct: 84  QCILYTVYTVHHVYGTPCILYTMYTVQHVYCTACKLYTMYTVHHVY 129


>UniRef50_Q8IBJ2 Cluster: Putative uncharacterized protein MAL7P1.146;
            n=2; Plasmodium|Rep: Putative uncharacterized protein
            MAL7P1.146 - Plasmodium falciparum (isolate 3D7)
          Length = 4894

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
 Frame = +3

Query: 45   IDIKN*INLHCYENGNEFNFYNDTELQIEF*IGNEL*HIQIAYNYYFVN----------V 194
            +++KN  N + Y N NE++  N+ +   E+ I NE  +    Y YY+ N           
Sbjct: 1461 VNMKN-NNNNEYNNNNEYDNNNEYDNNNEYDINNEYDNNNNNYYYYYCNNMNNQYKSKLG 1519

Query: 195  IHKMVRVQKVLYQNNDLYMVELKK-NIVFINILLCYSFQI 311
            I++ + +  + +  N L  +ELKK NI   NI+L YS  I
Sbjct: 1520 INEPININDISFIKNYL-RIELKKDNIKNKNIILIYSLFI 1558


>UniRef50_Q7RPQ7 Cluster: 4-hydroxybenzoate octaprenyltransferase;
           n=5; Plasmodium (Vinckeia)|Rep: 4-hydroxybenzoate
           octaprenyltransferase - Plasmodium yoelii yoelii
          Length = 530

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = -2

Query: 287 NVNKYNVFF*LNHV*VIILVQDFLYSHHFMYYIYKVVIVSYLYVL 153
           N  KY+    +N +  ++ +  +L+  H+ YYI+    VSYLY L
Sbjct: 425 NTIKYSKILIINMI-YLLYISAYLFDIHYSYYIFSTFNVSYLYYL 468


>UniRef50_Q4Z0M0 Cluster: Guanylyl cyclase, putative; n=1;
           Plasmodium berghei|Rep: Guanylyl cyclase, putative -
           Plasmodium berghei
          Length = 120

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 15/53 (28%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
 Frame = +3

Query: 165 IAYNYYFVNVIHKMVRV---QKVLYQNNDLYMVELKKNIVFINILLCYSFQIF 314
           I Y Y ++N+ +  V+    +K +Y +  ++ +  K +I+F N+   YSF++F
Sbjct: 49  ITYIYIYINIFNSFVKKFKRKKKIYSDLHVFKMVKKHDIIFYNLYNFYSFRLF 101


>UniRef50_A0CUM3 Cluster: Chromosome undetermined scaffold_28, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_28,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 243

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
 Frame = -2

Query: 224 DFLYSHHFMYYIYKVVIVSYLYVLQLITNLEFDL*FRVIVKVEFVAIFVAM*VNLVFNIY 45
           +FLY +  +  ++ +++    ++L+ +   +F+L  R+I  + F   F    +NL  N  
Sbjct: 115 NFLYYYSLIILLFGILLSMCFHILKQLQQEKFNLPIRIIQNLVFDICFFIYLLNLFLNQI 174

Query: 44  SM*SDI-YFHNKIQG 3
            M S + YF+  +QG
Sbjct: 175 IMNSPLFYFYTFLQG 189


>UniRef50_Q8D2K6 Cluster: 4-diphosphocytidyl-2-C-methyl-D-erythritol
           kinase (EC 2.7.1.148) (CMK)
           (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol
           kinase); n=1; Wigglesworthia glossinidia endosymbiont of
           Glossina brevipalpis|Rep:
           4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC
           2.7.1.148) (CMK)
           (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol
           kinase) - Wigglesworthia glossinidia brevipalpis
          Length = 304

 Score = 33.1 bits (72), Expect = 6.8
 Identities = 17/36 (47%), Positives = 25/36 (69%)
 Frame = +1

Query: 493 PKIKFTTQLLF*KYSLISKSFKPS*CHVFLKRFLKN 600
           P IK +T+L+F K+ L  KS+  S C+ +LK+ LKN
Sbjct: 187 PPIKISTKLIFNKFILNKKSYLKS-CNQYLKKPLKN 221


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,142,201
Number of Sequences: 1657284
Number of extensions: 11498501
Number of successful extensions: 27319
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 26096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27286
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56198352344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)