Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0327
         (733 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   2.5  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    23   3.4  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   3.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   3.4  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    23   3.4  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    23   3.4  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    23   3.4  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   4.4  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    22   5.9  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   5.9  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   5.9  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    22   5.9  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   7.8  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = +2

Query: 200 APTARPLACPLLASETASLTPITPPPSDIVIARSQKPKDIGELAAEIGLCPS 355
           AP   PLA PL+    +S T  T   S  V+A    P     +AA  G+  S
Sbjct: 89  APEPAPLASPLVQEPGSSTTSAT---SGAVMASPPMPITTDNVAAISGVLRS 137


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -1

Query: 469 WCRSYTSNYD 440
           WC  YT+ YD
Sbjct: 15  WCEQYTTKYD 24


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = -1

Query: 154 PTPPGTGVTAEATLTASW*ATSPTK 80
           P PP T  T   TLT  +     TK
Sbjct: 160 PLPPTTSTTTRTTLTTKFTTKPSTK 184


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
 Frame = +2

Query: 218 LACPLLASETASLTPITPPPSDI-VIAR----SQKPKDIGELAA-EIGLCP 352
           L  PLL S  AS +P+T P   + + AR     +KP+  G L    +G+ P
Sbjct: 419 LVGPLLTSALASWSPLTNPKQYMEIFARWKDILEKPRQRGTLEGNNMGIQP 469


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 666 MNVASHVQVELLHWNYLRVAPSS 598
           +N+A  VQV LL  N  +V P++
Sbjct: 308 LNIARRVQVTLLQVNLSQVDPAT 330


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 666 MNVASHVQVELLHWNYLRVAPSS 598
           +N+A  VQV LL  N  +V P++
Sbjct: 308 LNIARRVQVTLLQVNLSQVDPAT 330


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 666 MNVASHVQVELLHWNYLRVAPSS 598
           +N+A  VQV LL  N  +V P++
Sbjct: 308 LNIARRVQVTLLQVNLSQVDPAT 330


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +2

Query: 170 DAHAEHRAGSAPTARPLACPLLASETASLTPITPPPSD-IVIARSQK 307
           D    +++     AR  + P++     +  P+TPP S+ +V  +S+K
Sbjct: 75  DLQHSYQSPQTQPARFYSTPIVPHFAYNHNPLTPPNSEPLVSPKSEK 121


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 279 LGGGVIGVSEAVSEAKRG 226
           +GGG++G   A+  AKRG
Sbjct: 12  VGGGLVGSLCAIFMAKRG 29


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 279 LGGGVIGVSEAVSEAKRG 226
           +GGG++G   A+  AKRG
Sbjct: 12  VGGGLVGSLCAIFMAKRG 29


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 279 LGGGVIGVSEAVSEAKRG 226
           +GGG++G   A+  AKRG
Sbjct: 12  VGGGLVGSLCAIFMAKRG 29


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -2

Query: 501 PIRVVLLPSPSGVGVIPATTMYFPVRWLRSL 409
           PI    + +PS +    A  ++  V+W+RS+
Sbjct: 187 PIFAPTMINPSAICESAAQLLFMNVQWVRSI 217


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 486 LLPSPSGVGVIPATTMYFPVRWLR 415
           L P P+ V  I +T + FP R ++
Sbjct: 71  LWPQPTSVTKISSTLLKFPYRSIK 94


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,458
Number of Sequences: 336
Number of extensions: 3523
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)