Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0327
(733 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0365 + 2865496-2865588,2865673-2865856,2866791-2866948,286... 105 3e-23
02_01_0156 - 1086750-1086920,1087680-1087847,1087935-1088171,108... 103 1e-22
09_02_0466 + 9599389-9599662,9600324-9600643,9600950-9601186,960... 101 8e-22
09_04_0315 + 16600387-16600557,16600652-16600801,16600874-166008... 99 4e-21
05_06_0189 + 26257587-26257791,26257962-26258003,26258064-262584... 34 0.13
07_01_1113 - 10292781-10293299 33 0.18
03_05_0267 - 22538631-22539452 33 0.23
01_01_0656 + 5013609-5014256 33 0.23
09_02_0028 + 3109502-3110232,3110274-3110727 32 0.41
01_01_1103 - 8744873-8745724 32 0.54
11_05_0087 + 18970741-18972702 31 0.71
01_03_0068 - 12188426-12188767 31 0.71
11_01_0112 + 875447-875490,875854-876359,876750-876976,877112-87... 31 0.94
02_02_0096 - 6727844-6727957,6728149-6728247,6728332-6728410,672... 31 0.94
03_05_0373 + 23581812-23583293 30 1.6
12_02_1177 - 26708215-26708309,26708355-26708392,26708476-267095... 30 2.2
05_03_0001 - 7269231-7269436,7269536-7270100,7270600-7270821,727... 29 3.8
04_04_1090 - 30764340-30764704,30765092-30765204,30765414-307656... 29 3.8
01_05_0791 + 25267885-25267930,25268258-25268713,25268802-252688... 29 3.8
01_01_0930 + 7347680-7347886,7348030-7348082,7348175-7348247,734... 29 3.8
12_01_0495 - 3935395-3937110 29 5.0
08_01_0839 + 8210084-8210341,8210499-8210582,8211345-8211461,821... 29 5.0
06_01_0263 + 1936927-1936936,1937031-1937305,1937727-1938079,193... 29 5.0
01_06_1451 + 37451004-37451113,37451422-37451661,37451765-374518... 29 5.0
01_01_1028 - 8145716-8145841,8145943-8145988,8146329-8146548,814... 29 5.0
01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411 29 5.0
10_08_1023 - 22341815-22342042,22342179-22342247,22342717-223428... 28 6.6
09_04_0465 + 17827224-17827997,17828711-17829024,17829949-178303... 28 6.6
03_02_1036 + 13573160-13573243,13573361-13573684,13573880-135741... 28 6.6
02_04_0170 + 20576149-20576889 28 6.6
02_03_0243 - 16791789-16793306 28 6.6
01_04_0141 + 16618916-16619265,16619400-16619418 28 6.6
12_02_0923 - 24392892-24394148 28 8.8
03_05_0477 + 24707460-24707553,24707644-24707711,24707857-247079... 28 8.8
03_03_0189 - 15287429-15287437,15288006-15288359 28 8.8
03_01_0308 + 2431213-2432040 28 8.8
>05_01_0365 +
2865496-2865588,2865673-2865856,2866791-2866948,
2867035-2867247,2867330-2867560
Length = 292
Score = 105 bits (253), Expect = 3e-23
Identities = 48/68 (70%), Positives = 55/68 (80%)
Frame = +3
Query: 3 WIKPGAVVIDCGINAIEDPTKKSGQRLVGDVAYQEAVKVASAVTPVPGGVGPMTVAMLMR 182
WIKPGA VID G N+I DPT+KSG RLVGDV + E KVA +TPVPGGVGPMTVAML++
Sbjct: 221 WIKPGAAVIDVGTNSISDPTRKSGYRLVGDVDFAEVSKVAGHLTPVPGGVGPMTVAMLLK 280
Query: 183 NTVQAARR 206
NTV A+R
Sbjct: 281 NTVDGAKR 288
>02_01_0156 -
1086750-1086920,1087680-1087847,1087935-1088171,
1088763-1089073,1089343-1089571
Length = 371
Score = 103 bits (248), Expect = 1e-22
Identities = 43/68 (63%), Positives = 55/68 (80%)
Frame = +3
Query: 3 WIKPGAVVIDCGINAIEDPTKKSGQRLVGDVAYQEAVKVASAVTPVPGGVGPMTVAMLMR 182
WIKPGA +ID GIN ++DP G RLVGDV Y+EA K+A +TPVPGGVGPMT+AML+
Sbjct: 299 WIKPGAAIIDVGINPVDDPESPRGYRLVGDVCYEEASKIAGLITPVPGGVGPMTIAMLLS 358
Query: 183 NTVQAARR 206
NT+++A+R
Sbjct: 359 NTLESAKR 366
>09_02_0466 +
9599389-9599662,9600324-9600643,9600950-9601186,
9601278-9601445,9601778-9601966
Length = 395
Score = 101 bits (241), Expect = 8e-22
Identities = 44/67 (65%), Positives = 55/67 (82%)
Frame = +3
Query: 3 WIKPGAVVIDCGINAIEDPTKKSGQRLVGDVAYQEAVKVASAVTPVPGGVGPMTVAMLMR 182
W+K GAVVID G N IEDPT G RL GDV ++EAVK+ASA+TPVPGGVGP+T+AML+
Sbjct: 317 WLKKGAVVIDVGTNPIEDPTSDYGYRLTGDVCFEEAVKLASAITPVPGGVGPVTIAMLLA 376
Query: 183 NTVQAAR 203
NT+ +A+
Sbjct: 377 NTLDSAK 383
>09_04_0315 +
16600387-16600557,16600652-16600801,16600874-16600897,
16601519-16602694,16603120-16603266,16603477-16603752
Length = 647
Score = 98.7 bits (235), Expect = 4e-21
Identities = 46/80 (57%), Positives = 58/80 (72%)
Frame = +2
Query: 266 TPPPSDIVIARSQKPKDIGELAAEIGLCPSEVSQYGRTKAKISLSVLDRLRNQRTGKYIV 445
+P P+DI IA + P I ++AAE+GL P YG+ KAK+ LSVLD L+ Q+ G Y+V
Sbjct: 17 SPVPADIDIANAVSPLPIADIAAELGLRPEHFDLYGKYKAKVLLSVLDELKGQQDGYYVV 76
Query: 446 VAGITPTPLGEGKSTTLIGL 505
V GITPTPLGEGKSTT +GL
Sbjct: 77 VGGITPTPLGEGKSTTTVGL 96
Score = 91.5 bits (217), Expect = 6e-19
Identities = 40/57 (70%), Positives = 45/57 (78%)
Frame = +1
Query: 529 GKNAFACMRQPSQGPTFGVKXXXXXXXYSQVIPMEEFNLHMTGDIHAVTAANNLLAA 699
G C+RQPSQGPTFG+K YSQVIPM+EFNLH+TGDIHA+TAANNLLAA
Sbjct: 113 GVEVVTCLRQPSQGPTFGIKGGAAGGGYSQVIPMDEFNLHLTGDIHAITAANNLLAA 169
>05_06_0189 +
26257587-26257791,26257962-26258003,26258064-26258436,
26258515-26258656,26259356-26259514,26259599-26259661,
26259992-26260180
Length = 390
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = -1
Query: 292 YYDVTGRWRNRGERSGFRGQEGASKRSS 209
YY GR R RG+R GFRG G RS+
Sbjct: 344 YYGGRGRGRGRGDRGGFRGGYGEGHRSA 371
>07_01_1113 - 10292781-10293299
Length = 172
Score = 33.5 bits (73), Expect = 0.18
Identities = 21/70 (30%), Positives = 33/70 (47%)
Frame = +2
Query: 53 GSYKEKRATFSGRRGLPGGGQSSFGCDSCAGRRGAHDRGDAHAEHRAGSAPTARPLACPL 232
G+ +E+R+ GRR GGG D+ A +G G A + S+P A+P +C
Sbjct: 35 GAMRERRS--GGRRRRGGGGDGDGDDDAGAREQGGGGDGGVGAGELSPSSPRAQPRSCSS 92
Query: 233 LASETASLTP 262
+ + T P
Sbjct: 93 VDAATKGNPP 102
>03_05_0267 - 22538631-22539452
Length = 273
Score = 33.1 bits (72), Expect = 0.23
Identities = 28/94 (29%), Positives = 33/94 (35%), Gaps = 5/94 (5%)
Frame = +2
Query: 14 WSGRYRLWYQRY*GSYKEKRATFSGRRGLPGGG-----QSSFGCDSCAGRRGAHDRGDAH 178
W GR R W+ R + + G G GGG SS G S G GD
Sbjct: 98 WLGRRRRWWARATAAVDGLGDSGGGGLGDGGGGGLGGGGSSGGEGSGGGSSDGEGCGDGS 157
Query: 179 AEHRAGSAPTARPLACPLLASETASLTPITPPPS 280
G PT R A P +P +PP S
Sbjct: 158 GGGELGGGPTVRRRASPPARPRWWPCSPSSPPAS 191
>01_01_0656 + 5013609-5014256
Length = 215
Score = 33.1 bits (72), Expect = 0.23
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = +2
Query: 104 GGGQSSFGCDSCAGRRGAHDRGDAHAEHRAGSAP--TARPLACPLLASETASLTPITPPP 277
GG ++ C GRR + AHA H A P TA PL+ A P PPP
Sbjct: 77 GGTRNKVAPAPCTGRR----KRAAHAAHAAAPPPTTTASSAPLPLMPPAVAYELPFLPPP 132
Query: 278 SDIVIA 295
+ +A
Sbjct: 133 PPLPLA 138
>09_02_0028 + 3109502-3110232,3110274-3110727
Length = 394
Score = 32.3 bits (70), Expect = 0.41
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -2
Query: 606 PSSSTPFNAKGRSLTRLPHACKRVLPAMCCQRFTR 502
P+ S+PF+A L RLP+ V A+ C+R+ R
Sbjct: 15 PTISSPFDAVSEDLLRLPNMASLVNAALACKRWRR 49
>01_01_1103 - 8744873-8745724
Length = 283
Score = 31.9 bits (69), Expect = 0.54
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 3 WIKPGAVVIDCGINAIEDPTKKSGQRLVGDVAYQEAVKVASAVTPV 140
W KPG V G++A+ P + GQR G A + AS P+
Sbjct: 164 WCKPGVVAKLMGLDAVPVPVRGGGQRRGGAAATAGGRRKASGAPPL 209
>11_05_0087 + 18970741-18972702
Length = 653
Score = 31.5 bits (68), Expect = 0.71
Identities = 37/114 (32%), Positives = 45/114 (39%), Gaps = 4/114 (3%)
Frame = +2
Query: 92 RGLPGGGQSSFGCDSC-AGRRGAHDRGDAHAEHRAGSAPTARPLACPLL---ASETASLT 259
R +P GGQ A RR H R H EHR G A P P S A
Sbjct: 41 RAVPDGGQEEPQLHVVRAPRRPLHGRHGHHREHRRG-ADELEPAGSPRHHRGQSVRAGAN 99
Query: 260 PITPPPSDIVIARSQKPKDIGELAAEIGLCPSEVSQYGRTKAKISLSVLDRLRN 421
I+ P D+ I R E AA GL S R+ ++L+VL R R+
Sbjct: 100 RISDLPDDL-IQRILHFAPARE-AASTGLLSSRWRSLWRSTGAVNLAVLVRRRD 151
>01_03_0068 - 12188426-12188767
Length = 113
Score = 31.5 bits (68), Expect = 0.71
Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +2
Query: 86 GRRGL-PGGGQSSFGCDSCAGRRGAHDRGDAHAEHRAGSAPTARPLACPLLASET 247
GRRGL G S S AG G GD GS+P A P AC + + T
Sbjct: 45 GRRGLWRRHGSSLHAHGSIAGDNGRCRSGDGLKHEAGGSSPRADPTACGTVEAGT 99
>11_01_0112 +
875447-875490,875854-876359,876750-876976,877112-877237,
877313-877359,877888-878251,878396-878779
Length = 565
Score = 31.1 bits (67), Expect = 0.94
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +2
Query: 104 GGGQSSFGCDSCAGRRGAHDRGDAHAEHRAGSAPTARPL 220
G G+ S G AGRRG H RG + R G+ A L
Sbjct: 97 GAGRISSGAGGGAGRRGRHGRGSSGGSGRHGAEEEAARL 135
>02_02_0096 -
6727844-6727957,6728149-6728247,6728332-6728410,
6728534-6728634,6728740-6728808,6729180-6729220,
6729992-6730836,6730924-6731027,6731479-6732354
Length = 775
Score = 31.1 bits (67), Expect = 0.94
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +2
Query: 98 LPGGGQSSFGCDSCAGRRGAHDRGDAHAEHRAGSA-PTARPLACPLLASETASLTPITPP 274
L GGG S G + G H +HR SA P P + A+ A P+ P
Sbjct: 10 LSGGGGSGGGAAAAGAPSGEHHH--RPRQHRRSSAQPPPLPPPPVVAAAAAAEAAPVMAP 67
Query: 275 PSDIVIARSQKPKDIG 322
+ V A + +P+ +G
Sbjct: 68 VAAPVAAAAAEPRGMG 83
>03_05_0373 + 23581812-23583293
Length = 493
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = -2
Query: 336 SAASSPMSLGF*ERAITMSLGGGVIGVSEAVSEAKRGQASGRAVGALPARCSA*ASPRS- 160
+AA+S S F ++ + S G S + + G + + P+RCSA P+S
Sbjct: 18 AAAASAASASFSPKSFSSSSASDDDGCSSSSWQTNDGAGGYGSAASSPSRCSASTPPKSP 77
Query: 159 WAPRRP 142
WA P
Sbjct: 78 WAAHLP 83
>12_02_1177 -
26708215-26708309,26708355-26708392,26708476-26709563,
26709826-26709945,26710018-26710098,26710696-26710812,
26711122-26711904
Length = 773
Score = 29.9 bits (64), Expect = 2.2
Identities = 25/73 (34%), Positives = 31/73 (42%)
Frame = +2
Query: 86 GRRGLPGGGQSSFGCDSCAGRRGAHDRGDAHAEHRAGSAPTARPLACPLLASETASLTPI 265
G G G GQS G S GRRG G A+ A S T + C A+ S T +
Sbjct: 16 GGGGGGGAGQSGDGGGSRGGRRGG---GGGEAKAVARSKTTVKQEGCD--AAVARSKTTV 70
Query: 266 TPPPSDIVIARSQ 304
D +ARS+
Sbjct: 71 KQEGCDAAVARSK 83
>05_03_0001 -
7269231-7269436,7269536-7270100,7270600-7270821,
7270913-7271155,7271227-7271481,7272017-7272370,
7273082-7273164,7273250-7273630,7273874-7274027
Length = 820
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Frame = +3
Query: 312 KTSESWRQRSVCVRAR---CLNMDVLR 383
KT WR R+VC+ +R C+N DVL+
Sbjct: 156 KTEFGWRLRTVCLGSRKNLCINKDVLK 182
>04_04_1090 -
30764340-30764704,30765092-30765204,30765414-30765638,
30766432-30766553,30766617-30767174,30769207-30769477,
30772175-30773256
Length = 911
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +2
Query: 17 SGRYRLWYQRY*GSYKEKRATFSGRRGLPGGGQSSFGCD---SCAGRRGAHDRGD 172
SG+ R W + G+Y+EKR GRR G++ G CA RRGA R +
Sbjct: 803 SGKCRAWKE---GNYQEKRGCRGGRR-RGRHGRALIGLVPVLGCAARRGAARRAE 853
>01_05_0791 +
25267885-25267930,25268258-25268713,25268802-25268832,
25268949-25269255
Length = 279
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/58 (25%), Positives = 23/58 (39%)
Frame = +2
Query: 200 APTARPLACPLLASETASLTPITPPPSDIVIARSQKPKDIGELAAEIGLCPSEVSQYG 373
+PT P P+ + + TP TP + S P D G ++ G + YG
Sbjct: 189 SPTTLPPPTPMTPTTPMTPTPTTPDTGTPIYGGSTTPPDYGSMSPPGGFGSNSPPDYG 246
>01_01_0930 +
7347680-7347886,7348030-7348082,7348175-7348247,
7348493-7348594,7348697-7348798,7348888-7348959,
7349067-7349129,7349210-7349251,7349620-7349679,
7349755-7349865,7350044-7350214,7350392-7350482,
7350571-7350845
Length = 473
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 561 RLPHACKRVLPAMCCQRFTRPIRVVLLPSPSGVGVIPATTMYFPV 427
+LP + + C+R TR I V L P G V+P+T + V
Sbjct: 135 KLPEKTVENMKGVRCKRITRCIGSVGLYVPGGTAVLPSTALMLAV 179
>12_01_0495 - 3935395-3937110
Length = 571
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +2
Query: 167 GDAHAEHRAGSAPTARPLACPLLASETASLTPITPPPSDIVIARSQKP 310
GD +A A P RP A +A+ + T PPP D V A P
Sbjct: 449 GDVNAYAAAAPTPRIRPNAAEAMAATATAET--MPPPLDAVAAELSAP 494
>08_01_0839 +
8210084-8210341,8210499-8210582,8211345-8211461,
8211850-8211945,8212164-8212427,8212522-8212704
Length = 333
Score = 28.7 bits (61), Expect = 5.0
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = +2
Query: 140 AGRRGAHDRGDAHAEHRAGSAPTARPLACPLLASETASLTPITPPPSDIVIARSQKPKDI 319
A G H+ A + + +APT+ +A+ + ++PPPS + Q+P D
Sbjct: 10 ANVHGQHEPHLAQEDSISSAAPTS-------IAAPPEAAADVSPPPSSVGSRLPQQPGDG 62
Query: 320 GELAAEIGLCP--SEVSQYGRTKAK 388
G A+ G P + V Q G+ K K
Sbjct: 63 GGRGAD-GWSPAAAAVGQKGKKKEK 86
>06_01_0263 +
1936927-1936936,1937031-1937305,1937727-1938079,
1938598-1938715,1938823-1938946,1939389-1939608,
1939948-1940017,1940083-1940136,1940536-1940604,
1941138-1941194,1941503-1941575,1942037-1942080,
1942629-1942751,1943092-1943321,1943552-1943660,
1944196-1944339,1944443-1944604,1944921-1945197,
1945326-1945486,1945591-1945782,1946789-1946971,
1946986-1947063,1947187-1947366,1947476-1947562
Length = 1130
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -1
Query: 205 RRAACTVFRMSIATVMGPTPPGTGVTAEATLTAS 104
R A+ +V S+ + PT PG GV A + LTA+
Sbjct: 33 RSASTSVSSASVRLRVAPTDPGVGVGAASLLTAA 66
>01_06_1451 +
37451004-37451113,37451422-37451661,37451765-37451846,
37452159-37452200,37452285-37452344,37453020-37454663,
37454763-37454864,37455846-37455986,37456077-37456202,
37456376-37456543
Length = 904
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +2
Query: 62 KEKRATFSGRRGLPGGGQSSFGCDSCAGRRGAHDRGDA 175
KEK A G GGG D AG +HDR DA
Sbjct: 66 KEKAAALRSGTGRGGGGGEGHAADGAAGH--SHDRVDA 101
>01_01_1028 -
8145716-8145841,8145943-8145988,8146329-8146548,
8146832-8146955
Length = 171
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = -2
Query: 687 IVGSGYGMNVASHVQVELLHWNYLRVAPSSSTPFNAKGRSLTRLPHACKRV 535
+VG G+ SH++ HWNY + P+++T A ++ + AC+ +
Sbjct: 75 VVGIASGLVGFSHIR----HWNYYSLQPAATTGLLAWALTVLAMGLACQEI 121
>01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411
Length = 885
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -1
Query: 175 SIATVMGPTPPGTGVTAEATLTASW*ATSPTKRCP 71
S AT G PG GV A SW AT P P
Sbjct: 77 SAATAAGVAAPGVGVVARLMGLESWPATGPVGAPP 111
>10_08_1023 - 22341815-22342042,22342179-22342247,22342717-22342840,
22343193-22343317,22343815-22344276,22344357-22344700,
22345061-22345406,22345492-22345941,22346760-22347051,
22347171-22347515,22347611-22347834,22348072-22348563,
22348664-22349056,22349601-22349741,22349845-22350207,
22350494-22352683,22353298-22353360,22353434-22353535,
22353672-22354027,22354326-22354413,22354517-22354750,
22355508-22355975
Length = 2632
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -1
Query: 271 WRNRGERSGFRGQEGASKRSSCRRAACTVFRMSIATVMGP 152
W + G GF G G+S R C RA V+ V+GP
Sbjct: 1101 WCDLGRLDGFGGGGGSSVRELCSRAMAIVYEQH-NKVIGP 1139
>09_04_0465 +
17827224-17827997,17828711-17829024,17829949-17830397,
17830641-17830756
Length = 550
Score = 28.3 bits (60), Expect = 6.6
Identities = 22/77 (28%), Positives = 31/77 (40%)
Frame = +2
Query: 176 HAEHRAGSAPTARPLACPLLASETASLTPITPPPSDIVIARSQKPKDIGELAAEIGLCPS 355
H HR P R + PLLAS+T + +P P+ +A +G + P
Sbjct: 46 HHHHRLAPTPLRRRIP-PLLASQTPNPEADSPAPAGTKLAPLLVSLAVGLAVRFLAPRPP 104
Query: 356 EVSQYGRTKAKISLSVL 406
EVS I LS +
Sbjct: 105 EVSPQAWQLLSIFLSTI 121
>03_02_1036 +
13573160-13573243,13573361-13573684,13573880-13574143,
13574662-13574793,13574919-13575620
Length = 501
Score = 28.3 bits (60), Expect = 6.6
Identities = 25/79 (31%), Positives = 32/79 (40%)
Frame = +2
Query: 74 ATFSGRRGLPGGGQSSFGCDSCAGRRGAHDRGDAHAEHRAGSAPTARPLACPLLASETAS 253
A F G ++ F S R DA++E P A LL S S
Sbjct: 384 AAFPGYMASTASAKAKFRSMSTPKERSGAGAADAYSEQ-------CFPFADRLL-SPIPS 435
Query: 254 LTPITPPPSDIVIARSQKP 310
++PI SDIV ARS +P
Sbjct: 436 MSPIPSIASDIVFARSSRP 454
>02_04_0170 + 20576149-20576889
Length = 246
Score = 28.3 bits (60), Expect = 6.6
Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 4/80 (5%)
Frame = +2
Query: 53 GSYKEKRATFSGRRGLPGGGQSSFGCDSCAGRRGAHDRGDAHAEHRAGSAPTARPLACPL 232
G +E+ G G G SS S A R A R +APT RP+A P
Sbjct: 56 GDGEEEGRGSQGGDDAGGAGASSSSSSSAAARANTVVPVPQRAA-RGATAPTPRPVAPPQ 114
Query: 233 LAS----ETASLTPITPPPS 280
+ A++ P PPP+
Sbjct: 115 AGTWPLPAPAAMPPPPPPPT 134
>02_03_0243 - 16791789-16793306
Length = 505
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -1
Query: 319 DVFRLLRTSYYDVTG--RWRNRGERSGFRGQEGASKRSSCRR 200
DV + +T V RW + RSG+RG GAS ++S R
Sbjct: 422 DVVSVAKTGAMSVAAALRWASLCRRSGWRGSGGASAKTSPSR 463
>01_04_0141 + 16618916-16619265,16619400-16619418
Length = 122
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 104 GGGQSSFGCDSCAGRRGAHDR 166
GGG G D C GRRG R
Sbjct: 61 GGGDCDSGADQCDGRRGTSSR 81
>12_02_0923 - 24392892-24394148
Length = 418
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 15 GAVVIDCGINAIEDPTKKSGQRLVGD 92
G +V+D G N ++DP S +R + D
Sbjct: 228 GLLVLDLGSNGVDDPPNASHRRCIAD 253
>03_05_0477 +
24707460-24707553,24707644-24707711,24707857-24707903,
24709188-24710160
Length = 393
Score = 27.9 bits (59), Expect = 8.8
Identities = 23/91 (25%), Positives = 33/91 (36%), Gaps = 2/91 (2%)
Frame = +2
Query: 107 GGQSSFGCDSCAGRRGAHDRGDAHAEHRAGSAPTARPLACPLLASETASLTPITPPPSDI 286
G SSF S AGRR A AGS R A AS ++
Sbjct: 14 GSSSSFSSSSSAGRRSASAARSVRVAAAAGSCAARRAGGRMSKAESPASAASSKSDGHEV 73
Query: 287 VIARSQKPKDIGELAAEIGLC--PSEVSQYG 373
++ + + I E+ + +C +V YG
Sbjct: 74 LLFEALREALIEEMKEDPTVCVFGEDVGHYG 104
>03_03_0189 - 15287429-15287437,15288006-15288359
Length = 120
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -1
Query: 283 VTGRWRNRGERSGFRGQEGASK 218
V RWR RGER+ RG A K
Sbjct: 3 VPARWRGRGERANLRGYVVAMK 24
>03_01_0308 + 2431213-2432040
Length = 275
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 104 GGGQSSFGCDSCAGRRGAHDRGDAHAEH-RAGSAPTARPL 220
GGG S G + AG GAH+ + + GS+PTARP+
Sbjct: 46 GGGGVSGGVGATAG--GAHEPLELYMHDILGGSSPTARPI 83
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,578,435
Number of Sequences: 37544
Number of extensions: 486133
Number of successful extensions: 2078
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2071
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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