Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0324
(659 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ974166-1|ABJ52806.1| 494|Anopheles gambiae serpin 6 protein. 26 1.2
AF364132-2|AAL35509.1| 411|Anopheles gambiae putative odorant r... 25 2.8
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 24 3.7
AY973196-1|AAY41590.1| 94|Anopheles gambiae defensin 4 protein. 24 3.7
AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled ... 24 3.7
AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein... 24 3.7
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 23 6.5
Y08163-1|CAA69355.1| 192|Anopheles gambiae hypothetical protein... 23 8.5
DQ370037-1|ABD18598.1| 121|Anopheles gambiae putative TIL domai... 23 8.5
AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ chann... 23 8.5
AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium ch... 23 8.5
>DQ974166-1|ABJ52806.1| 494|Anopheles gambiae serpin 6 protein.
Length = 494
Score = 25.8 bits (54), Expect = 1.2
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -2
Query: 76 NSSRTSRRRLQATL 35
NSSRT+ RRLQATL
Sbjct: 350 NSSRTAIRRLQATL 363
>AF364132-2|AAL35509.1| 411|Anopheles gambiae putative odorant
receptor Or3 protein.
Length = 411
Score = 24.6 bits (51), Expect = 2.8
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -2
Query: 385 RIRFPSKPDTPRSSEPILIPKLRIQFADFPYL 290
R+R + TP+ +++PKL+ + A P+L
Sbjct: 5 RLRLITSFGTPQDKRTMVLPKLKDETAVMPFL 36
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 24.2 bits (50), Expect = 3.7
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +1
Query: 337 LALRTGACRVWTGSGCGRCRVWSM 408
+++ G V G+ C C VWSM
Sbjct: 5 ISVHVGQAGVQIGNPCWDCTVWSM 28
>AY973196-1|AAY41590.1| 94|Anopheles gambiae defensin 4 protein.
Length = 94
Score = 24.2 bits (50), Expect = 3.7
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
Frame = -1
Query: 389 RPHPLPVQTRHAPVLRANPYSEV-----TDPICRLPLPTLFYRLEALHLGTC-CGY 240
RPH P Q AP++ + + V T+P C YR + +G C C Y
Sbjct: 38 RPHIQPFQMASAPLVAQSRSAMVQTLTCTNPTCSAQCRGRGYRRGSCTIGRCFCSY 93
>AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled
receptor protein.
Length = 611
Score = 24.2 bits (50), Expect = 3.7
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -1
Query: 401 QTRHRPHPLPVQTRHAPVLRANPYSEVT 318
Q H PH Q +H P + P++ V+
Sbjct: 72 QLHHSPHQYHQQVQHQPQPPSTPFANVS 99
>AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein
coupled receptor protein.
Length = 612
Score = 24.2 bits (50), Expect = 3.7
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -1
Query: 401 QTRHRPHPLPVQTRHAPVLRANPYSEVT 318
Q H PH Q +H P + P++ V+
Sbjct: 73 QLHHSPHQYHQQVQHQPQPPSTPFANVS 100
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 23.4 bits (48), Expect = 6.5
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -3
Query: 624 PLNGGRTESCRSRTKRNR 571
P +GGR SCRS R R
Sbjct: 262 PRSGGRWPSCRSPPARRR 279
>Y08163-1|CAA69355.1| 192|Anopheles gambiae hypothetical protein
protein.
Length = 192
Score = 23.0 bits (47), Expect = 8.5
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -2
Query: 655 IPLVRASSELTVERRSYRIVPIAHETKPTRLTARKIRGRP 536
+ L E V+ I+P A +KPT T + I +P
Sbjct: 21 VGLPTVDEENVVQAEQLPILPTADSSKPTDDTVKAIAPQP 60
>DQ370037-1|ABD18598.1| 121|Anopheles gambiae putative TIL domain
polypeptide protein.
Length = 121
Score = 23.0 bits (47), Expect = 8.5
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = -1
Query: 206 PSPEFSRSAESIRTPPQMRCSSRSEPY 126
P P + + E PP++ C+ E Y
Sbjct: 39 PEPSTTEATEEESPPPKIECTDPREVY 65
>AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ channel
protein.
Length = 574
Score = 23.0 bits (47), Expect = 8.5
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -3
Query: 138 FRTISPFYRIPWNSNAQAEKKTLPGPLGGVFRPLWVTPSN 19
F T+ Y N+ A + T G G FRP+ TP N
Sbjct: 213 FNTLDTVYMFR-NATAPSIFPTEVGSSSGRFRPILWTPEN 251
>AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium
channel protein.
Length = 572
Score = 23.0 bits (47), Expect = 8.5
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -3
Query: 138 FRTISPFYRIPWNSNAQAEKKTLPGPLGGVFRPLWVTPSN 19
F T+ Y N+ A + T G G FRP+ TP N
Sbjct: 213 FNTLDTVYMFR-NATAPSIFPTEVGSSSGRFRPILWTPEN 251
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 732,419
Number of Sequences: 2352
Number of extensions: 16115
Number of successful extensions: 42
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -