Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0322
         (326 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40938-6|AAA81698.1|  655|Caenorhabditis elegans Hypothetical pr...    27   2.4  
Z70037-4|CAA93877.1|  146|Caenorhabditis elegans Hypothetical pr...    27   3.2  
Z93376-2|CAD59146.2|  578|Caenorhabditis elegans Hypothetical pr...    27   4.2  
Z82279-4|CAD59150.2|  578|Caenorhabditis elegans Hypothetical pr...    27   4.2  
AL132949-42|CAD59173.2|  578|Caenorhabditis elegans Hypothetical...    27   4.2  
Z36282-2|CAA85288.3|  240|Caenorhabditis elegans Hypothetical pr...    26   5.6  
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr...    26   7.4  
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr...    26   7.4  
AL132902-6|CAC14421.1|  316|Caenorhabditis elegans Hypothetical ...    26   7.4  
AL132847-1|CAB63371.1|  375|Caenorhabditis elegans Hypothetical ...    26   7.4  
AF040661-12|AAG24221.1|  210|Caenorhabditis elegans Hypothetical...    25   9.7  

>U40938-6|AAA81698.1|  655|Caenorhabditis elegans Hypothetical
           protein D1009.1a protein.
          Length = 655

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 233 EIDAIGFFLTRASRLRRSGYNSVRCRG 313
           E+D  G F  + + L++ GY+ V C+G
Sbjct: 597 EVDRTGTFKLKKTDLQKQGYDLVACKG 623


>Z70037-4|CAA93877.1|  146|Caenorhabditis elegans Hypothetical
           protein T27D12.3 protein.
          Length = 146

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 30  RPSGRWCEVPSAGLCLNASKAEAS 101
           RPSG WC     GL L  ++ EAS
Sbjct: 35  RPSGPWCVKLFVGLYLQGNRNEAS 58


>Z93376-2|CAD59146.2|  578|Caenorhabditis elegans Hypothetical
           protein E01F3.1b protein.
          Length = 578

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = +1

Query: 79  TPLRPKPA*PNPARICSLWSPESREALNN---VTLLVAFRIQNARRDVEAHLD 228
           T L   PA PN AR  S W  E+  + NN     + +  +I  +R++   H+D
Sbjct: 119 TGLPTVPAEPNKARSSSYWKTEASPSNNNEHETPVDLLRKISVSRKESGTHVD 171


>Z82279-4|CAD59150.2|  578|Caenorhabditis elegans Hypothetical
           protein E01F3.1b protein.
          Length = 578

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = +1

Query: 79  TPLRPKPA*PNPARICSLWSPESREALNN---VTLLVAFRIQNARRDVEAHLD 228
           T L   PA PN AR  S W  E+  + NN     + +  +I  +R++   H+D
Sbjct: 119 TGLPTVPAEPNKARSSSYWKTEASPSNNNEHETPVDLLRKISVSRKESGTHVD 171


>AL132949-42|CAD59173.2|  578|Caenorhabditis elegans Hypothetical
           protein E01F3.1b protein.
          Length = 578

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = +1

Query: 79  TPLRPKPA*PNPARICSLWSPESREALNN---VTLLVAFRIQNARRDVEAHLD 228
           T L   PA PN AR  S W  E+  + NN     + +  +I  +R++   H+D
Sbjct: 119 TGLPTVPAEPNKARSSSYWKTEASPSNNNEHETPVDLLRKISVSRKESGTHVD 171


>Z36282-2|CAA85288.3|  240|Caenorhabditis elegans Hypothetical
           protein K10G9.2 protein.
          Length = 240

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 5/38 (13%)
 Frame = -2

Query: 145 SRGSTVSISLPDSA-----RLASALEAFRHNPADGTSH 47
           ++G ++S+SLP SA     R  +  +AFR++ A   SH
Sbjct: 135 NKGQSLSVSLPPSARHTPHRFVNEEDAFRNSMASSDSH 172


>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein
            T12D8.1 protein.
          Length = 2561

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 17/71 (23%), Positives = 29/71 (40%)
 Frame = -2

Query: 223  NGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPADGTSHH 44
            N  R++      + R +       PD  G  + ++  D   LA+  E  +   A+   H 
Sbjct: 1171 NKARKQKKNLAAKKRQMVKTQTAAPDYDGRNIDLNESDQQTLATLTEQIKVTQAEIELHR 1230

Query: 43   RPLGRVHEPNV 11
            R L + HE N+
Sbjct: 1231 RDL-KKHESNL 1240


>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein
            T12D8.1 protein.
          Length = 2561

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 17/71 (23%), Positives = 29/71 (40%)
 Frame = -2

Query: 223  NGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPADGTSHH 44
            N  R++      + R +       PD  G  + ++  D   LA+  E  +   A+   H 
Sbjct: 1171 NKARKQKKNLAAKKRQMVKTQTAAPDYDGRNIDLNESDQQTLATLTEQIKVTQAEIELHR 1230

Query: 43   RPLGRVHEPNV 11
            R L + HE N+
Sbjct: 1231 RDL-KKHESNL 1240


>AL132902-6|CAC14421.1|  316|Caenorhabditis elegans Hypothetical
           protein Y71A12B.6 protein.
          Length = 316

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = +3

Query: 9   RTFGSCTRPSGRWC-EVPSAGLCLNASKAEASLAES-GKDMLT-VEPRESGG 155
           + F   TRP G+WC  V  A  C+   +  +   +S G  +L+ VE  E  G
Sbjct: 144 KNFTMVTRPKGQWCIGVVPAKACITQKQGSSMCTKSYGNSILSGVENFEEYG 195


>AL132847-1|CAB63371.1|  375|Caenorhabditis elegans Hypothetical
           protein Y48G10A.2 protein.
          Length = 375

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = +3

Query: 117 KDMLTVEPRESGGSKQCDFTSRVSHSKRETR 209
           K ++  EP+E+   +  D+ + ++HSK E +
Sbjct: 326 KMLIRTEPKETALRRAADYLNELTHSKTEKK 356


>AF040661-12|AAG24221.1|  210|Caenorhabditis elegans Hypothetical
           protein W10G11.14 protein.
          Length = 210

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +3

Query: 30  RPSGRWCEVPSAGLCLNASKAEA 98
           RPSG WC    AG   NA KA+A
Sbjct: 49  RPSGGWCMRVFAG--FNAKKADA 69


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,955,322
Number of Sequences: 27780
Number of extensions: 151422
Number of successful extensions: 408
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 408
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 398409266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)