Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0320
(735 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30216| Best HMM Match : TIL (HMM E-Value=3.1) 58 1e-08
SB_14965| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 1e-08
SB_6863| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 1e-08
SB_5602| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_49647| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_35257| Best HMM Match : Sec8_exocyst (HMM E-Value=0.59) 47 1e-05
SB_20402| Best HMM Match : Transformer (HMM E-Value=2.1) 46 3e-05
SB_27787| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_29359| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_13467| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_53289| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_49224| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_27353| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_24059| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_58055| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.019
SB_54389| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.019
SB_51835| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.019
SB_48809| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.019
SB_41857| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.019
SB_40886| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.019
SB_40435| Best HMM Match : DUF1677 (HMM E-Value=4.2) 37 0.019
SB_9214| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.019
SB_5959| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.019
SB_3984| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.019
SB_47626| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.019
SB_7775| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.045
SB_55300| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.079
SB_53216| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.079
SB_24856| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.079
SB_16637| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.079
SB_52007| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_9493| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_48730| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_24609| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_40315| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_32500| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_24543| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_20448| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_9995| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_5288| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_4968| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_3995| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_1350| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_59236| Best HMM Match : Attractin (HMM E-Value=8.2) 32 0.55
SB_53668| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_53194| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_47973| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_40285| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_19187| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_19053| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_16426| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_15603| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_6844| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_161| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_46486| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=0.7) 30 1.7
SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0) 29 3.9
SB_11440| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_34697| Best HMM Match : Ion_trans (HMM E-Value=7.9e-38) 29 5.2
>SB_30216| Best HMM Match : TIL (HMM E-Value=3.1)
Length = 212
Score = 57.6 bits (133), Expect = 1e-08
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +3
Query: 624 TAGRWPWKSESAKECATTHLPKQPALK 704
TAGRWPWK ESAKEC TTHLPKQ ALK
Sbjct: 1 TAGRWPWKLESAKECVTTHLPKQLALK 27
>SB_14965| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 57.6 bits (133), Expect = 1e-08
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +3
Query: 624 TAGRWPWKSESAKECATTHLPKQPALK 704
TAGRWPWK ESAKEC TTHLPKQ ALK
Sbjct: 1 TAGRWPWKLESAKECVTTHLPKQLALK 27
>SB_6863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 57.6 bits (133), Expect = 1e-08
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +3
Query: 624 TAGRWPWKSESAKECATTHLPKQPALK 704
TAGRWPWK ESAKEC TTHLPKQ ALK
Sbjct: 80 TAGRWPWKLESAKECVTTHLPKQLALK 106
>SB_5602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 50.4 bits (115), Expect = 1e-06
Identities = 27/55 (49%), Positives = 31/55 (56%)
Frame = +1
Query: 571 KAPKKRSWDTMKGVGRS*QQDGGHGSRNPLRSVQRLTCRSNQP*KMDGAEAFCLY 735
+ +RS D KGVG S QQDGGHGS NPL+ KMDGA+A LY
Sbjct: 10 RCQSRRSSDPTKGVGCSRQQDGGHGSWNPLKECVTTPLPKQLALKMDGAQASHLY 64
>SB_49647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 48.0 bits (109), Expect = 8e-06
Identities = 26/55 (47%), Positives = 30/55 (54%)
Frame = +1
Query: 571 KAPKKRSWDTMKGVGRS*QQDGGHGSRNPLRSVQRLTCRSNQP*KMDGAEAFCLY 735
+ +RS D KGVG S QQDGGHGS NP + KMDGA+A LY
Sbjct: 10 RCQSRRSSDPTKGVGCSRQQDGGHGSWNPAKECVTTHLPKQLALKMDGAQASHLY 64
>SB_35257| Best HMM Match : Sec8_exocyst (HMM E-Value=0.59)
Length = 1060
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/36 (63%), Positives = 25/36 (69%)
Frame = +1
Query: 571 KAPKKRSWDTMKGVGRS*QQDGGHGSRNPLRSVQRL 678
+ +RS D KGVG S QQDGGHGS NPLR QRL
Sbjct: 10 RCQSRRSSDPTKGVGCSRQQDGGHGSWNPLRKGQRL 45
>SB_20402| Best HMM Match : Transformer (HMM E-Value=2.1)
Length = 276
Score = 46.0 bits (104), Expect = 3e-05
Identities = 30/64 (46%), Positives = 35/64 (54%)
Frame = -3
Query: 631 PAVMSDQRLSWCPMSVF*AP*TTFGSSHSASSAYQNWPTWHVIRSPASSFE*AGVLTHLK 452
P V SD+R W P F GSS ASS YQN PT I P + + G+LT+LK
Sbjct: 62 PFVGSDERRLWHPYRAF-------GSSRIASSGYQNGPTRTRIHCPGFNKQ-VGLLTNLK 113
Query: 451 FENR 440
FENR
Sbjct: 114 FENR 117
>SB_27787| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = +3
Query: 624 TAGRWPWKSESAKECATTHLPKQPALK 704
TAGR + ESAKEC TTHLPKQ ALK
Sbjct: 1 TAGRVAMEVESAKECVTTHLPKQLALK 27
>SB_29359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 33
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +2
Query: 584 NAHGTP*KALVAHDSRTVAMEVGIR 658
+AH TP K LVA DSRTVAMEVGIR
Sbjct: 9 DAHQTPQKVLVALDSRTVAMEVGIR 33
>SB_13467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = -1
Query: 252 PPSGFPLTST*PGIVHHLSGPSICA 178
PP FPL S GIVHHLSGP+ CA
Sbjct: 5 PPPEFPLASPYSGIVHHLSGPNRCA 29
>SB_53289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = +3
Query: 645 KSESAKECATTHLPKQPALK 704
K ESAKEC TTHLPKQ ALK
Sbjct: 9 KLESAKECVTTHLPKQLALK 28
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 625 QQDGGHGSRNPLRSVQRLTCRSNQP*KMDGAEAFCLY 735
QQDGGHG + KMDGA+A LY
Sbjct: 2 QQDGGHGKLESAKECVTTHLPKQLALKMDGAQASHLY 38
>SB_49224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = +3
Query: 645 KSESAKECATTHLPKQPALK 704
K ESAKEC TTHLPKQ ALK
Sbjct: 2 KLESAKECVTTHLPKQLALK 21
>SB_27353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = +3
Query: 645 KSESAKECATTHLPKQPALK 704
K ESAKEC TTHLPKQ ALK
Sbjct: 2 KLESAKECVTTHLPKQLALK 21
>SB_24059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 42
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = +3
Query: 645 KSESAKECATTHLPKQPALK 704
K ESAKEC TTHLPKQ ALK
Sbjct: 2 KVESAKECVTTHLPKQLALK 21
>SB_58055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +3
Query: 651 ESAKECATTHLPKQPALK 704
ESAKEC TTHLPKQ ALK
Sbjct: 4 ESAKECVTTHLPKQLALK 21
>SB_54389| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +3
Query: 651 ESAKECATTHLPKQPALK 704
ESAKEC TTHLPKQ ALK
Sbjct: 4 ESAKECVTTHLPKQLALK 21
>SB_51835| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +3
Query: 651 ESAKECATTHLPKQPALK 704
ESAKEC TTHLPKQ ALK
Sbjct: 4 ESAKECVTTHLPKQLALK 21
>SB_48809| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +3
Query: 651 ESAKECATTHLPKQPALK 704
ESAKEC TTHLPKQ ALK
Sbjct: 4 ESAKECVTTHLPKQLALK 21
>SB_41857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +3
Query: 651 ESAKECATTHLPKQPALK 704
ESAKEC TTHLPKQ ALK
Sbjct: 4 ESAKECVTTHLPKQLALK 21
>SB_40886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +3
Query: 651 ESAKECATTHLPKQPALK 704
ESAKEC TTHLPKQ ALK
Sbjct: 4 ESAKECVTTHLPKQLALK 21
>SB_40435| Best HMM Match : DUF1677 (HMM E-Value=4.2)
Length = 93
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +3
Query: 651 ESAKECATTHLPKQPALK 704
ESAKEC TTHLPKQ ALK
Sbjct: 4 ESAKECVTTHLPKQLALK 21
>SB_9214| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +3
Query: 651 ESAKECATTHLPKQPALK 704
ESAKEC TTHLPKQ ALK
Sbjct: 4 ESAKECVTTHLPKQLALK 21
>SB_5959| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +3
Query: 651 ESAKECATTHLPKQPALK 704
ESAKEC TTHLPKQ ALK
Sbjct: 4 ESAKECVTTHLPKQLALK 21
>SB_3984| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +3
Query: 651 ESAKECATTHLPKQPALK 704
ESAKEC TTHLPKQ ALK
Sbjct: 4 ESAKECVTTHLPKQLALK 21
>SB_47626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +3
Query: 651 ESAKECATTHLPKQPALK 704
ESAKEC TTHLPKQ ALK
Sbjct: 10 ESAKECVTTHLPKQLALK 27
>SB_7775| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 35.5 bits (78), Expect = 0.045
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = -3
Query: 253 SSIRVSPDFDLTRHSSPSFGSQHLCS 176
+S RVS F L RHSSPSFGSQ + S
Sbjct: 39 ASTRVSSGFTLFRHSSPSFGSQQMRS 64
>SB_55300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 34.7 bits (76), Expect = 0.079
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +3
Query: 654 SAKECATTHLPKQPALK 704
SAKEC TTHLPKQ ALK
Sbjct: 5 SAKECVTTHLPKQLALK 21
>SB_53216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 34.7 bits (76), Expect = 0.079
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +3
Query: 654 SAKECATTHLPKQPALK 704
SAKEC TTHLPKQ ALK
Sbjct: 5 SAKECVTTHLPKQLALK 21
>SB_24856| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 34.7 bits (76), Expect = 0.079
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +3
Query: 654 SAKECATTHLPKQPALK 704
SAKEC TTHLPKQ ALK
Sbjct: 5 SAKECVTTHLPKQLALK 21
>SB_16637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 34.7 bits (76), Expect = 0.079
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +3
Query: 654 SAKECATTHLPKQPALK 704
SAKEC TTHLPKQ ALK
Sbjct: 5 SAKECVTTHLPKQLALK 21
>SB_52007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 33.9 bits (74), Expect = 0.14
Identities = 30/73 (41%), Positives = 36/73 (49%)
Frame = -3
Query: 733 IGKTLQRHPFFRAGCFGR*VVAHSLADSDFHGHRPAVMSDQRLSWCPMSVF*AP*TTFGS 554
IG TL+RHPF +G +VA + + F G SD+R W F GS
Sbjct: 24 IGATLERHPF--SG-----LVASAEQPTPFVG------SDERRLWHLNRAF-------GS 63
Query: 553 SHSASSAYQNWPT 515
S ASSAYQ WPT
Sbjct: 64 SRIASSAYQKWPT 76
>SB_9493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 33.9 bits (74), Expect = 0.14
Identities = 30/73 (41%), Positives = 36/73 (49%)
Frame = -3
Query: 733 IGKTLQRHPFFRAGCFGR*VVAHSLADSDFHGHRPAVMSDQRLSWCPMSVF*AP*TTFGS 554
IG TL+RHPF +G +VA + + F G SD+R W F GS
Sbjct: 22 IGATLERHPF--SG-----LVASAEQPTPFVG------SDERRLWHLNRAF-------GS 61
Query: 553 SHSASSAYQNWPT 515
S ASSAYQ WPT
Sbjct: 62 SRIASSAYQKWPT 74
>SB_48730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 32.7 bits (71), Expect = 0.32
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -3
Query: 313 ISLSPLYPVPTIDLHVR 263
ISLSPLYP TIDLHVR
Sbjct: 38 ISLSPLYPNLTIDLHVR 54
>SB_24609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 32.3 bits (70), Expect = 0.42
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -3
Query: 562 FGSSHSASSAYQNWPTWHV 506
FGSS ASSAYQ WPT ++
Sbjct: 21 FGSSRIASSAYQKWPTRNI 39
>SB_40315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 83
Score = 31.9 bits (69), Expect = 0.55
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -3
Query: 562 FGSSHSASSAYQNWPT 515
FGSS ASSAYQ WPT
Sbjct: 58 FGSSRIASSAYQKWPT 73
>SB_32500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 31.9 bits (69), Expect = 0.55
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -3
Query: 562 FGSSHSASSAYQNWPT 515
FGSS ASSAYQ WPT
Sbjct: 21 FGSSRIASSAYQKWPT 36
>SB_24543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 31.9 bits (69), Expect = 0.55
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -3
Query: 562 FGSSHSASSAYQNWPT 515
FGSS ASSAYQ WPT
Sbjct: 21 FGSSRIASSAYQKWPT 36
>SB_20448| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 31.9 bits (69), Expect = 0.55
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -3
Query: 562 FGSSHSASSAYQNWPT 515
FGSS ASSAYQ WPT
Sbjct: 59 FGSSRIASSAYQKWPT 74
>SB_9995| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 31.9 bits (69), Expect = 0.55
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -3
Query: 562 FGSSHSASSAYQNWPT 515
FGSS ASSAYQ WPT
Sbjct: 21 FGSSRIASSAYQKWPT 36
>SB_5288| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 71
Score = 31.9 bits (69), Expect = 0.55
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -3
Query: 562 FGSSHSASSAYQNWPT 515
FGSS ASSAYQ WPT
Sbjct: 21 FGSSRIASSAYQKWPT 36
>SB_4968| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 31.9 bits (69), Expect = 0.55
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -3
Query: 562 FGSSHSASSAYQNWPT 515
FGSS ASSAYQ WPT
Sbjct: 21 FGSSRIASSAYQKWPT 36
>SB_3995| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 31.9 bits (69), Expect = 0.55
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -3
Query: 562 FGSSHSASSAYQNWPT 515
FGSS ASSAYQ WPT
Sbjct: 21 FGSSRIASSAYQKWPT 36
>SB_1350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 54
Score = 31.9 bits (69), Expect = 0.55
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -3
Query: 562 FGSSHSASSAYQNWPT 515
FGSS ASSAYQ WPT
Sbjct: 21 FGSSRIASSAYQKWPT 36
>SB_59236| Best HMM Match : Attractin (HMM E-Value=8.2)
Length = 125
Score = 31.9 bits (69), Expect = 0.55
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -3
Query: 562 FGSSHSASSAYQNWPT 515
FGSS ASSAYQ WPT
Sbjct: 100 FGSSRIASSAYQKWPT 115
>SB_53668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 31.9 bits (69), Expect = 0.55
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -3
Query: 562 FGSSHSASSAYQNWPT 515
FGSS ASSAYQ WPT
Sbjct: 21 FGSSRIASSAYQKWPT 36
>SB_53194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 31.9 bits (69), Expect = 0.55
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -3
Query: 562 FGSSHSASSAYQNWPT 515
FGSS ASSAYQ WPT
Sbjct: 21 FGSSRIASSAYQKWPT 36
>SB_47973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 31.9 bits (69), Expect = 0.55
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -3
Query: 562 FGSSHSASSAYQNWPT 515
FGSS ASSAYQ WPT
Sbjct: 21 FGSSRIASSAYQKWPT 36
>SB_40285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 31.9 bits (69), Expect = 0.55
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -3
Query: 562 FGSSHSASSAYQNWPT 515
FGSS ASSAYQ WPT
Sbjct: 21 FGSSRIASSAYQKWPT 36
>SB_19187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 31.9 bits (69), Expect = 0.55
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -3
Query: 562 FGSSHSASSAYQNWPT 515
FGSS ASSAYQ WPT
Sbjct: 21 FGSSRIASSAYQKWPT 36
>SB_19053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 31.9 bits (69), Expect = 0.55
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -3
Query: 562 FGSSHSASSAYQNWPT 515
FGSS ASSAYQ WPT
Sbjct: 21 FGSSRIASSAYQKWPT 36
>SB_16426| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 31.9 bits (69), Expect = 0.55
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -3
Query: 562 FGSSHSASSAYQNWPT 515
FGSS ASSAYQ WPT
Sbjct: 21 FGSSRIASSAYQKWPT 36
>SB_15603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 31.9 bits (69), Expect = 0.55
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -3
Query: 562 FGSSHSASSAYQNWPT 515
FGSS ASSAYQ WPT
Sbjct: 143 FGSSRIASSAYQKWPT 158
>SB_6844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 54
Score = 31.1 bits (67), Expect = 0.97
Identities = 16/25 (64%), Positives = 16/25 (64%)
Frame = -3
Query: 562 FGSSHSASSAYQNWPTWHVIRSPAS 488
FGSS ASSAYQN P I PAS
Sbjct: 21 FGSSRIASSAYQNGPLGTRIHCPAS 45
>SB_161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -3
Query: 562 FGSSHSASSAYQNWPT 515
+GSS ASSAYQ WPT
Sbjct: 21 YGSSRIASSAYQKWPT 36
>SB_46486| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=0.7)
Length = 703
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +3
Query: 171 RSEHKCWDPKD--GELCLVRSKSGETLMEDVAILTCKSIVGTGYRGERLIEPSSSWFRPK 344
+++ C D ++ GE +KS +T D ++ +C+S++ TG + L + S RP+
Sbjct: 303 QNDLSCSDSENEGGESFSTTAKSKDTKANDYSMTSCRSVLATGLNEQSLAKRKESIRRPE 362
>SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 3369
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -3
Query: 676 VVAHSLADSDFHGHRPAVMSDQRLSWCPMSVF 581
+ H + ++DF G R A+M+D +L C S+F
Sbjct: 386 LTTHFMDEADFLGDRIAIMADGQLRCCGSSLF 417
>SB_11440| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -3
Query: 562 FGSSHSASSAYQNWPT 515
FGSS ASSA Q WPT
Sbjct: 78 FGSSRIASSALQKWPT 93
>SB_34697| Best HMM Match : Ion_trans (HMM E-Value=7.9e-38)
Length = 1851
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +3
Query: 234 GETLMED--VAILTCKSIVGTGYRGERLIEPS 323
G TLM D VA+L C+ V T G LI+PS
Sbjct: 1389 GFTLMHDSNVALLACQICVHTNTSGSTLIQPS 1420
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,666,511
Number of Sequences: 59808
Number of extensions: 510473
Number of successful extensions: 1277
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 1102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1274
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1974037988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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