Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0318
         (644 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283265-1|AAG15372.1|   67|Anopheles gambiae beta-hexosaminidas...    89   1e-19
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    25   2.0  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      24   3.6  

>AF283265-1|AAG15372.1|   67|Anopheles gambiae beta-hexosaminidase,
           beta chain protein.
          Length = 67

 Score = 89.0 bits (211), Expect = 1e-19
 Identities = 40/67 (59%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
 Frame = +2

Query: 2   CMWTEVVNDMNIMSRVWPRASAVAERLWGHES-QAAYQVYSRLEEHTCRMNARGIRAQPP 178
           CMW+EVVN  NI+ R++PR  A AE+LW   S   A +   RLEE TCRMN RGI AQPP
Sbjct: 1   CMWSEVVNGHNILPRIFPRVXATAEKLWSPASVNNADEAARRLEEQTCRMNHRGIPAQPP 60

Query: 179 SGPGFCL 199
           +GPGFC+
Sbjct: 61  NGPGFCI 67


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 12/49 (24%), Positives = 24/49 (48%)
 Frame = +2

Query: 5   MWTEVVNDMNIMSRVWPRASAVAERLWGHESQAAYQVYSRLEEHTCRMN 151
           +W   V D+N++ +V P  + +  +LW   S    +    + + TC +N
Sbjct: 774 VWLHRVRDLNVVQKVVPLNTFLLPKLWFVASVCGARAMD-IAKVTCTVN 821


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 7/19 (36%), Positives = 15/19 (78%)
 Frame = -1

Query: 572 EDYIPRDHSFKHVFSLVCL 516
           +D +P D SF+ ++++VC+
Sbjct: 490 QDVVPSDPSFEDMYAVVCV 508


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 639,855
Number of Sequences: 2352
Number of extensions: 12636
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)