Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0318
         (644 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M23294-1|AAA52645.1|  556|Homo sapiens beta-hexosaminidase beta-...    66   8e-11
M19735-1|AAA68620.1|  544|Homo sapiens beta-hexosaminidase beta-...    66   8e-11
M13519-1|AAA51828.1|  572|Homo sapiens HEXB protein.                   66   8e-11
BT009919-1|AAP88921.1|  556|Homo sapiens hexosaminidase B (beta ...    66   8e-11
BC017378-1|AAH17378.1|  556|Homo sapiens hexosaminidase B (beta ...    66   8e-11
AY643499-1|AAV48875.1|  331|Homo sapiens ENC-1AS protein.              66   8e-11
AF378118-1|AAM46114.1|  556|Homo sapiens cervical cancer proto-o...    66   8e-11
S62076-1|AAD13932.1|  529|Homo sapiens HEXA protein.                   66   1e-10
M16424-1|AAB00965.1|  529|Homo sapiens HEXA protein.                   66   1e-10
M13520-1|AAA51827.1|  490|Homo sapiens HEXA protein.                   66   1e-10
BC084537-1|AAH84537.1|  529|Homo sapiens hexosaminidase A (alpha...    66   1e-10
BC021030-1|AAH21030.1|  309|Homo sapiens HEXA protein protein.         66   1e-10
BC018927-1|AAH18927.1|  529|Homo sapiens hexosaminidase A (alpha...    66   1e-10
BC001138-1|AAH01138.2|  409|Homo sapiens HEXA protein protein.         66   1e-10
AK222502-1|BAD96222.1|  529|Homo sapiens hexosaminidase A prepro...    66   1e-10

>M23294-1|AAA52645.1|  556|Homo sapiens beta-hexosaminidase
           beta-subunit protein.
          Length = 556

 Score = 66.5 bits (155), Expect = 8e-11
 Identities = 32/66 (48%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
 Frame = +2

Query: 2   CMWTEVVNDMNIMSRVWPRASAVAERLWGHES-QAAYQVYSRLEEHTCRMNARGIRAQPP 178
           C+W E V+  N+  R+WPRASAV ERLW  +  +     Y RL  H CRM  RGI AQP 
Sbjct: 487 CLWGEYVDATNLTPRLWPRASAVGERLWSSKDVRDMDDAYDRLTRHRCRMVERGIAAQPL 546

Query: 179 SGPGFC 196
              G+C
Sbjct: 547 YA-GYC 551


>M19735-1|AAA68620.1|  544|Homo sapiens beta-hexosaminidase
           beta-subunit protein.
          Length = 544

 Score = 66.5 bits (155), Expect = 8e-11
 Identities = 32/66 (48%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
 Frame = +2

Query: 2   CMWTEVVNDMNIMSRVWPRASAVAERLWGHES-QAAYQVYSRLEEHTCRMNARGIRAQPP 178
           C+W E V+  N+  R+WPRASAV ERLW  +  +     Y RL  H CRM  RGI AQP 
Sbjct: 475 CLWGEYVDATNLTPRLWPRASAVGERLWSSKDVRDMDDAYDRLTRHRCRMVERGIAAQPL 534

Query: 179 SGPGFC 196
              G+C
Sbjct: 535 YA-GYC 539


>M13519-1|AAA51828.1|  572|Homo sapiens HEXB protein.
          Length = 572

 Score = 66.5 bits (155), Expect = 8e-11
 Identities = 32/66 (48%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
 Frame = +2

Query: 2   CMWTEVVNDMNIMSRVWPRASAVAERLWGHES-QAAYQVYSRLEEHTCRMNARGIRAQPP 178
           C+W E V+  N+  R+WPRASAV ERLW  +  +     Y RL  H CRM  RGI AQP 
Sbjct: 503 CLWGEYVDATNLTPRLWPRASAVGERLWSSKDVRDMDDAYDRLTRHRCRMVERGIAAQPL 562

Query: 179 SGPGFC 196
              G+C
Sbjct: 563 YA-GYC 567


>BT009919-1|AAP88921.1|  556|Homo sapiens hexosaminidase B (beta
           polypeptide) protein.
          Length = 556

 Score = 66.5 bits (155), Expect = 8e-11
 Identities = 32/66 (48%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
 Frame = +2

Query: 2   CMWTEVVNDMNIMSRVWPRASAVAERLWGHES-QAAYQVYSRLEEHTCRMNARGIRAQPP 178
           C+W E V+  N+  R+WPRASAV ERLW  +  +     Y RL  H CRM  RGI AQP 
Sbjct: 487 CLWGEYVDATNLTPRLWPRASAVGERLWSSKDVRDMDDAYDRLTRHRCRMVERGIAAQPL 546

Query: 179 SGPGFC 196
              G+C
Sbjct: 547 YA-GYC 551


>BC017378-1|AAH17378.1|  556|Homo sapiens hexosaminidase B (beta
           polypeptide) protein.
          Length = 556

 Score = 66.5 bits (155), Expect = 8e-11
 Identities = 32/66 (48%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
 Frame = +2

Query: 2   CMWTEVVNDMNIMSRVWPRASAVAERLWGHES-QAAYQVYSRLEEHTCRMNARGIRAQPP 178
           C+W E V+  N+  R+WPRASAV ERLW  +  +     Y RL  H CRM  RGI AQP 
Sbjct: 487 CLWGEYVDATNLTPRLWPRASAVGERLWSSKDVRDMDDAYDRLTRHRCRMVERGIAAQPL 546

Query: 179 SGPGFC 196
              G+C
Sbjct: 547 YA-GYC 551


>AY643499-1|AAV48875.1|  331|Homo sapiens ENC-1AS protein.
          Length = 331

 Score = 66.5 bits (155), Expect = 8e-11
 Identities = 32/66 (48%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
 Frame = +2

Query: 2   CMWTEVVNDMNIMSRVWPRASAVAERLWGHES-QAAYQVYSRLEEHTCRMNARGIRAQPP 178
           C+W E V+  N+  R+WPRASAV ERLW  +  +     Y RL  H CRM  RGI AQP 
Sbjct: 262 CLWGEYVDATNLTPRLWPRASAVGERLWSSKDVRDMDDAYDRLTRHRCRMVERGIAAQPL 321

Query: 179 SGPGFC 196
              G+C
Sbjct: 322 YA-GYC 326


>AF378118-1|AAM46114.1|  556|Homo sapiens cervical cancer
           proto-oncogene 7 protein.
          Length = 556

 Score = 66.5 bits (155), Expect = 8e-11
 Identities = 32/66 (48%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
 Frame = +2

Query: 2   CMWTEVVNDMNIMSRVWPRASAVAERLWGHES-QAAYQVYSRLEEHTCRMNARGIRAQPP 178
           C+W E V+  N+  R+WPRASAV ERLW  +  +     Y RL  H CRM  RGI AQP 
Sbjct: 487 CLWGEYVDATNLTPRLWPRASAVGERLWSSKDVRDMDDAYDRLTRHRCRMVERGIAAQPL 546

Query: 179 SGPGFC 196
              G+C
Sbjct: 547 YA-GYC 551


>S62076-1|AAD13932.1|  529|Homo sapiens HEXA protein.
          Length = 529

 Score = 65.7 bits (153), Expect = 1e-10
 Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
 Frame = +2

Query: 2   CMWTEVVNDMNIMSRVWPRASAVAERLWGHESQAAYQ-VYSRLEEHTCRMNARGIRAQPP 178
           CMW E V++ N++ R+WPRA AVAERLW ++  +     Y RL    C +  RG++AQ P
Sbjct: 458 CMWGEYVDNTNLVPRLWPRAGAVAERLWSNKLTSDLTFAYERLSHFRCELLRRGVQAQ-P 516

Query: 179 SGPGFC 196
              GFC
Sbjct: 517 LNVGFC 522


>M16424-1|AAB00965.1|  529|Homo sapiens HEXA protein.
          Length = 529

 Score = 65.7 bits (153), Expect = 1e-10
 Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
 Frame = +2

Query: 2   CMWTEVVNDMNIMSRVWPRASAVAERLWGHESQAAYQ-VYSRLEEHTCRMNARGIRAQPP 178
           CMW E V++ N++ R+WPRA AVAERLW ++  +     Y RL    C +  RG++AQ P
Sbjct: 458 CMWGEYVDNTNLVPRLWPRAGAVAERLWSNKLTSDLTFAYERLSHFRCELLRRGVQAQ-P 516

Query: 179 SGPGFC 196
              GFC
Sbjct: 517 LNVGFC 522


>M13520-1|AAA51827.1|  490|Homo sapiens HEXA protein.
          Length = 490

 Score = 65.7 bits (153), Expect = 1e-10
 Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
 Frame = +2

Query: 2   CMWTEVVNDMNIMSRVWPRASAVAERLWGHESQAAYQ-VYSRLEEHTCRMNARGIRAQPP 178
           CMW E V++ N++ R+WPRA AVAERLW ++  +     Y RL    C +  RG++AQ P
Sbjct: 419 CMWGEYVDNTNLVPRLWPRAGAVAERLWSNKLTSDLTFAYERLSHFRCELLRRGVQAQ-P 477

Query: 179 SGPGFC 196
              GFC
Sbjct: 478 LNVGFC 483


>BC084537-1|AAH84537.1|  529|Homo sapiens hexosaminidase A (alpha
           polypeptide) protein.
          Length = 529

 Score = 65.7 bits (153), Expect = 1e-10
 Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
 Frame = +2

Query: 2   CMWTEVVNDMNIMSRVWPRASAVAERLWGHESQAAYQ-VYSRLEEHTCRMNARGIRAQPP 178
           CMW E V++ N++ R+WPRA AVAERLW ++  +     Y RL    C +  RG++AQ P
Sbjct: 458 CMWGEYVDNTNLVPRLWPRAGAVAERLWSNKLTSDLTFAYERLSHFRCELLRRGVQAQ-P 516

Query: 179 SGPGFC 196
              GFC
Sbjct: 517 LNVGFC 522


>BC021030-1|AAH21030.1|  309|Homo sapiens HEXA protein protein.
          Length = 309

 Score = 65.7 bits (153), Expect = 1e-10
 Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
 Frame = +2

Query: 2   CMWTEVVNDMNIMSRVWPRASAVAERLWGHESQAAYQ-VYSRLEEHTCRMNARGIRAQPP 178
           CMW E V++ N++ R+WPRA AVAERLW ++  +     Y RL    C +  RG++AQ P
Sbjct: 238 CMWGEYVDNTNLVPRLWPRAGAVAERLWSNKLTSDLTFAYERLSHFRCELLRRGVQAQ-P 296

Query: 179 SGPGFC 196
              GFC
Sbjct: 297 LNVGFC 302


>BC018927-1|AAH18927.1|  529|Homo sapiens hexosaminidase A (alpha
           polypeptide) protein.
          Length = 529

 Score = 65.7 bits (153), Expect = 1e-10
 Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
 Frame = +2

Query: 2   CMWTEVVNDMNIMSRVWPRASAVAERLWGHESQAAYQ-VYSRLEEHTCRMNARGIRAQPP 178
           CMW E V++ N++ R+WPRA AVAERLW ++  +     Y RL    C +  RG++AQ P
Sbjct: 458 CMWGEYVDNTNLVPRLWPRAGAVAERLWSNKLTSDLTFAYERLSHFRCELLRRGVQAQ-P 516

Query: 179 SGPGFC 196
              GFC
Sbjct: 517 LNVGFC 522


>BC001138-1|AAH01138.2|  409|Homo sapiens HEXA protein protein.
          Length = 409

 Score = 65.7 bits (153), Expect = 1e-10
 Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
 Frame = +2

Query: 2   CMWTEVVNDMNIMSRVWPRASAVAERLWGHESQAAYQ-VYSRLEEHTCRMNARGIRAQPP 178
           CMW E V++ N++ R+WPRA AVAERLW ++  +     Y RL    C +  RG++AQ P
Sbjct: 338 CMWGEYVDNTNLVPRLWPRAGAVAERLWSNKLTSDLTFAYERLSHFRCELLRRGVQAQ-P 396

Query: 179 SGPGFC 196
              GFC
Sbjct: 397 LNVGFC 402


>AK222502-1|BAD96222.1|  529|Homo sapiens hexosaminidase A
           preproprotein variant protein.
          Length = 529

 Score = 65.7 bits (153), Expect = 1e-10
 Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
 Frame = +2

Query: 2   CMWTEVVNDMNIMSRVWPRASAVAERLWGHESQAAYQ-VYSRLEEHTCRMNARGIRAQPP 178
           CMW E V++ N++ R+WPRA AVAERLW ++  +     Y RL    C +  RG++AQ P
Sbjct: 458 CMWGEYVDNTNLVPRLWPRAGAVAERLWSNKLTSDLTFAYERLSHFRCELLRRGVQAQ-P 516

Query: 179 SGPGFC 196
              GFC
Sbjct: 517 LNVGFC 522


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,553,425
Number of Sequences: 237096
Number of extensions: 1688387
Number of successful extensions: 2161
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2146
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)