Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0316
         (796 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    30   0.072
DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        26   1.5  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    25   3.6  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    24   4.7  
AY330180-1|AAQ16286.1|  176|Anopheles gambiae odorant-binding pr...    24   4.7  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    24   4.7  
AJ618924-1|CAF02003.1|  144|Anopheles gambiae odorant-binding pr...    24   4.7  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    24   4.7  
AF393486-1|AAL60411.1|  162|Anopheles gambiae twelve cysteine pr...    24   4.7  
Y08163-1|CAA69355.1|  192|Anopheles gambiae hypothetical protein...    23   8.2  
DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domai...    23   8.2  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   8.2  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   8.2  

>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 30.3 bits (65), Expect = 0.072
 Identities = 19/72 (26%), Positives = 34/72 (47%)
 Frame = -2

Query: 696 LDSRIPLVRASSELTVERRSYRIVPIAHETKPTRLTARKIRGRPENAGPDPVRNVRRFSR 517
           LD +   +RA ++L + RR      I  E KP  ++  +     EN   + +R ++    
Sbjct: 365 LDGKEAKIRADNDLLMGRRQELNQKIDTELKPEMMSIERSIETIENVASNKLRILQTRFE 424

Query: 516 VSYKYIQFLRPH 481
            +YK + +LR H
Sbjct: 425 GTYKAVLWLREH 436


>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -2

Query: 105 NSSRTSRRRLQATL 64
           NSSRT+ RRLQATL
Sbjct: 350 NSSRTAIRRLQATL 363


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -2

Query: 414 RIRFPSKPDTPRSSEPILIPKLRIQFADFPYL 319
           R+R  +   TP+    +++PKL+ + A  P+L
Sbjct: 5   RLRLITSFGTPQDKRTMVLPKLKDETAVMPFL 36


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 366 LALRTGACRVWTGSGCGRCRVWSM 437
           +++  G   V  G+ C  C VWSM
Sbjct: 5   ISVHVGQAGVQIGNPCWDCTVWSM 28


>AY330180-1|AAQ16286.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP54 protein.
          Length = 176

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 9/27 (33%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -1

Query: 748 RNH-IASTPARAIAMLCLIRQSDSPCP 671
           R+H +  +P  A  M+CL++ + + CP
Sbjct: 130 RDHDMKCSPVGAFFMMCLMKHTQAKCP 156


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 430 QTRHRPHPLPVQTRHAPVLRANPYSEVT 347
           Q  H PH    Q +H P   + P++ V+
Sbjct: 72  QLHHSPHQYHQQVQHQPQPPSTPFANVS 99


>AJ618924-1|CAF02003.1|  144|Anopheles gambiae odorant-binding
           protein OBP5470 protein.
          Length = 144

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 9/27 (33%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -1

Query: 748 RNH-IASTPARAIAMLCLIRQSDSPCP 671
           R+H +  +P  A  M+CL++ + + CP
Sbjct: 93  RDHDMKCSPVGAFFMMCLMKHTQAKCP 119


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 430 QTRHRPHPLPVQTRHAPVLRANPYSEVT 347
           Q  H PH    Q +H P   + P++ V+
Sbjct: 73  QLHHSPHQYHQQVQHQPQPPSTPFANVS 100


>AF393486-1|AAL60411.1|  162|Anopheles gambiae twelve cysteine
           protein 1 protein.
          Length = 162

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 9/27 (33%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -1

Query: 748 RNH-IASTPARAIAMLCLIRQSDSPCP 671
           R+H +  +P  A  M+CL++ + + CP
Sbjct: 130 RDHDMKCSPVGAFFMMCLMKHTQAKCP 156


>Y08163-1|CAA69355.1|  192|Anopheles gambiae hypothetical protein
           protein.
          Length = 192

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = -2

Query: 696 LDSRIPLVRASSELTVERRSYRIVPIAHETKPTRLTARKIRGRP 565
           + + + L     E  V+     I+P A  +KPT  T + I  +P
Sbjct: 17  IGASVGLPTVDEENVVQAEQLPILPTADSSKPTDDTVKAIAPQP 60


>DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 9/34 (26%), Positives = 15/34 (44%)
 Frame = -1

Query: 256 GRHLHVHPSPEFSRSAESIRTPPQMRCSSRSEPY 155
           G  +   P P  + + E    PP++ C+   E Y
Sbjct: 32  GETVPATPEPSTTEATEEESPPPKIECTDPREVY 65


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 653 PLNGGRTESCRSRTKRNR 600
           P +GGR  SCRS   R R
Sbjct: 262 PRSGGRWPSCRSPPARRR 279


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -1

Query: 778 ISSRDIRALGR-NHIASTPARAIAMLCLIRQSDSPCPCQF 662
           ++ R +RA    +H+A     ++  +CLI   DS C C F
Sbjct: 789 LAMRVVRAYKTISHVAVCVIASMVPICLILAEDSEC-CSF 827


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 886,563
Number of Sequences: 2352
Number of extensions: 19389
Number of successful extensions: 41
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83576403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)