Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0314
         (711 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n...    50   4e-05
UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3; ...    44   0.003
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    44   0.004
UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;...    40   0.060
UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep: ...    40   0.060
UniRef50_A2HZV9 Cluster: Putative uncharacterized protein; n=1; ...    38   0.32 
UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus lu...    36   1.3  

>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
           Gallus gallus
          Length = 103

 Score = 50.4 bits (115), Expect = 4e-05
 Identities = 25/33 (75%), Positives = 27/33 (81%)
 Frame = +1

Query: 553 LVKIFKVYSFRLRGLVRVPYRYFSSLPPRAGSG 651
           LVK FKV SF+L+GL RV Y YFSSLPPR GSG
Sbjct: 71  LVKGFKVDSFQLQGLERVLYCYFSSLPPRVGSG 103


>UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 76

 Score = 44.4 bits (100), Expect = 0.003
 Identities = 26/65 (40%), Positives = 35/65 (53%)
 Frame = +1

Query: 511 NYRGCWHQTCPPLFLVKIFKVYSFRLRGLVRVPYRYFSSLPPRAGSG*FARLLPSLDVVA 690
           NYR CWHQT P L    +       +    R  + + S  PP+  SG  +RLL  +D+VA
Sbjct: 9   NYRSCWHQTGPLLGFGTVEN--RTPIHSTKRHQWNW-SLPPPKVSSGKVSRLLLPVDIVA 65

Query: 691 VSQAP 705
           +SQAP
Sbjct: 66  ISQAP 70


>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 44.0 bits (99), Expect = 0.004
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = +2

Query: 92  GKCFR*CSSCDDPRISPLTSQYECPQ 169
           GKCFR C S ++ RISPLTS+Y+CPQ
Sbjct: 259 GKCFRSCLSPENLRISPLTSEYKCPQ 284



 Score = 39.9 bits (89), Expect = 0.060
 Identities = 23/43 (53%), Positives = 26/43 (60%)
 Frame = +2

Query: 506 SGITAAAGTRLALHCSSLKYLKCTHSDYEAS*ESRIVIFRHYL 634
           +GITAAAGTRLAL     K L   HS+Y+      IVI  HYL
Sbjct: 325 AGITAAAGTRLALQLIFGKVLSSHHSNYKTKIWPYIVISCHYL 367


>UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 493

 Score = 39.9 bits (89), Expect = 0.060
 Identities = 17/19 (89%), Positives = 17/19 (89%)
 Frame = +3

Query: 594 PRKSPVSLFFVTTSPCREW 650
           PRKSPV LFFVTTSP REW
Sbjct: 24  PRKSPVLLFFVTTSPGREW 42


>UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep:
          Predicted protein - Nematostella vectensis
          Length = 79

 Score = 39.9 bits (89), Expect = 0.060
 Identities = 18/23 (78%), Positives = 18/23 (78%)
 Frame = -2

Query: 83 FHQSRTKVRGSKAIRYRPSSNRK 15
          F   RTKVRGSK IRYRPSSN K
Sbjct: 6  FRCQRTKVRGSKTIRYRPSSNHK 28


>UniRef50_A2HZV9 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 91

 Score = 37.5 bits (83), Expect = 0.32
 Identities = 26/65 (40%), Positives = 34/65 (52%)
 Frame = +3

Query: 510 ELPRLLAPDLPSIVPR*NI*SVLIPITRPRKSPVSLFFVTTSPCREWVICAPAAFLGCGS 689
           ELP+LLAPD PS   R        P  + +K+P+ L  +T+S   EW   APAA  G   
Sbjct: 18  ELPQLLAPDWPS--ARFRYGGKPYPYPQYQKAPMEL-VITSSESLEWESFAPAATRGYSR 74

Query: 690 RFSGS 704
             SG+
Sbjct: 75  YLSGA 79


>UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus
          lucimarinus CCE9901|Rep: Predicted protein -
          Ostreococcus lucimarinus CCE9901
          Length = 72

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 16/23 (69%), Positives = 16/23 (69%)
 Frame = -2

Query: 83 FHQSRTKVRGSKAIRYRPSSNRK 15
          FH  RTKV GSK IRY PS N K
Sbjct: 6  FHCQRTKVGGSKMIRYHPSLNHK 28


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 696,283,831
Number of Sequences: 1657284
Number of extensions: 14194430
Number of successful extensions: 31311
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 30379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31295
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)