Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0309
         (517 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   2.8  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   2.8  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   2.8  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   4.9  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   4.9  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   8.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.6  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 10/19 (52%), Positives = 12/19 (63%), Gaps = 2/19 (10%)
 Frame = -1

Query: 226 CCKTCP--LSEIDIFTLII 176
           CCKTCP  L + DI   I+
Sbjct: 104 CCKTCPGDLYDSDIIQDIV 122


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 11/46 (23%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = +2

Query: 209 WTSFATKKKRSYLLLYINKIIYFAVK---IKF*NLSSFTKV*LKYF 337
           +  FA +  + Y+L ++N   +  VK   +++ NL+   +  L++F
Sbjct: 145 YKQFAIEYFQMYVLFFVNFAFFVVVKMLLVRYRNLTKQLRFKLRFF 190


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 11/46 (23%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = +2

Query: 209 WTSFATKKKRSYLLLYINKIIYFAVK---IKF*NLSSFTKV*LKYF 337
           +  FA +  + Y+L ++N   +  VK   +++ NL+   +  L++F
Sbjct: 145 YKQFAIEYFQMYVLFFVNFAFFVVVKMLLVRYRNLTKQLRFKLRFF 190


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -3

Query: 128 DNSIRSWNLTIFCSLWTVSANCELSIIIRI 39
           +N  ++  L  F + W  S  CE+  I+ I
Sbjct: 315 ENEGKTTQLDYFFTFWAFSNACEVMAIVWI 344


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -3

Query: 128 DNSIRSWNLTIFCSLWTVSANCELSIIIRI 39
           +N  ++  L  F + W  S  CE+  I+ I
Sbjct: 315 ENEGKTTQLDYFFTFWAFSNACEVMAIVWI 344


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 5/14 (35%), Positives = 9/14 (64%)
 Frame = +1

Query: 268 YIFCCQNKILKFIQ 309
           Y++CC N    F++
Sbjct: 159 YVYCCDNNFNVFLR 172


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 95  FCSLWTVSANCELSIIIRIKL 33
           FC+L T    C L+I +  +L
Sbjct: 406 FCTLVTALVYCSLAIFVLCEL 426


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,435
Number of Sequences: 336
Number of extensions: 2260
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)