Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0309
         (517 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U91994-1|AAB88790.1|  398|Drosophila melanogaster selenophosphat...   109   3e-24
AY095058-1|AAM11386.1|  398|Drosophila melanogaster LD46437p pro...   109   3e-24
AJ000672-1|CAA04229.1|  398|Drosophila melanogaster SelD protein...   109   3e-24
AE013599-1864|AAM70998.1|  398|Drosophila melanogaster CG8553-PB...   109   3e-24
AE013599-1863|AAF58266.1|  398|Drosophila melanogaster CG8553-PA...   109   3e-24
AE014134-2617|AAF53476.2| 1120|Drosophila melanogaster CG4587-PA...    29   4.9  

>U91994-1|AAB88790.1|  398|Drosophila melanogaster selenophosphate
           synthetase protein.
          Length = 398

 Score =  109 bits (261), Expect = 3e-24
 Identities = 49/50 (98%), Positives = 50/50 (100%)
 Frame = -1

Query: 508 CLPREQAAAYCKDIEKQEGYQAWIIGIVEKGNRTARIIDKPRVIEVPAKD 359
           CLPREQAAAYCKDIEKQEGYQAWIIGIVEKGN+TARIIDKPRVIEVPAKD
Sbjct: 349 CLPREQAAAYCKDIEKQEGYQAWIIGIVEKGNKTARIIDKPRVIEVPAKD 398


>AY095058-1|AAM11386.1|  398|Drosophila melanogaster LD46437p
           protein.
          Length = 398

 Score =  109 bits (261), Expect = 3e-24
 Identities = 49/50 (98%), Positives = 50/50 (100%)
 Frame = -1

Query: 508 CLPREQAAAYCKDIEKQEGYQAWIIGIVEKGNRTARIIDKPRVIEVPAKD 359
           CLPREQAAAYCKDIEKQEGYQAWIIGIVEKGN+TARIIDKPRVIEVPAKD
Sbjct: 349 CLPREQAAAYCKDIEKQEGYQAWIIGIVEKGNKTARIIDKPRVIEVPAKD 398


>AJ000672-1|CAA04229.1|  398|Drosophila melanogaster SelD protein
           protein.
          Length = 398

 Score =  109 bits (261), Expect = 3e-24
 Identities = 49/50 (98%), Positives = 50/50 (100%)
 Frame = -1

Query: 508 CLPREQAAAYCKDIEKQEGYQAWIIGIVEKGNRTARIIDKPRVIEVPAKD 359
           CLPREQAAAYCKDIEKQEGYQAWIIGIVEKGN+TARIIDKPRVIEVPAKD
Sbjct: 349 CLPREQAAAYCKDIEKQEGYQAWIIGIVEKGNKTARIIDKPRVIEVPAKD 398


>AE013599-1864|AAM70998.1|  398|Drosophila melanogaster CG8553-PB,
           isoform B protein.
          Length = 398

 Score =  109 bits (261), Expect = 3e-24
 Identities = 49/50 (98%), Positives = 50/50 (100%)
 Frame = -1

Query: 508 CLPREQAAAYCKDIEKQEGYQAWIIGIVEKGNRTARIIDKPRVIEVPAKD 359
           CLPREQAAAYCKDIEKQEGYQAWIIGIVEKGN+TARIIDKPRVIEVPAKD
Sbjct: 349 CLPREQAAAYCKDIEKQEGYQAWIIGIVEKGNKTARIIDKPRVIEVPAKD 398


>AE013599-1863|AAF58266.1|  398|Drosophila melanogaster CG8553-PA,
           isoform A protein.
          Length = 398

 Score =  109 bits (261), Expect = 3e-24
 Identities = 49/50 (98%), Positives = 50/50 (100%)
 Frame = -1

Query: 508 CLPREQAAAYCKDIEKQEGYQAWIIGIVEKGNRTARIIDKPRVIEVPAKD 359
           CLPREQAAAYCKDIEKQEGYQAWIIGIVEKGN+TARIIDKPRVIEVPAKD
Sbjct: 349 CLPREQAAAYCKDIEKQEGYQAWIIGIVEKGNKTARIIDKPRVIEVPAKD 398


>AE014134-2617|AAF53476.2| 1120|Drosophila melanogaster CG4587-PA
           protein.
          Length = 1120

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -1

Query: 298 LKFYFDSKIYNFINVKQ*ITSFFFCCKTCPLSEIDIFTL 182
           L+F  DS   +FIN+    T    C +TC    +D + L
Sbjct: 773 LQFQHDSLAKHFINITSACTGMTGCKRTCASDNLDCYVL 811


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,745,390
Number of Sequences: 53049
Number of extensions: 322247
Number of successful extensions: 642
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 642
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)