Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0308
(661 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles ... 26 0.92
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein. 25 1.6
AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein p... 25 2.1
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 25 2.8
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 24 3.7
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 24 4.9
AY341205-1|AAR13769.1| 285|Anopheles gambiae period protein. 23 8.5
AY341204-1|AAR13768.1| 285|Anopheles gambiae period protein. 23 8.5
AY341203-1|AAR13767.1| 285|Anopheles gambiae period protein. 23 8.5
AY341202-1|AAR13766.1| 285|Anopheles gambiae period protein. 23 8.5
AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled ... 23 8.5
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 23 8.5
AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein... 23 8.5
AJ302656-1|CAC35521.1| 385|Anopheles gambiae gSG1b protein prot... 23 8.5
>M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 574
Score = 26.2 bits (55), Expect = 0.92
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 110 PGPLLSEGRLTREQLLFTRNPSPRQSSRASLEYLLLPPRSAPTEAPSG 253
P P S + ++Q RN ++ RAS ++PPRS A G
Sbjct: 207 PLPRRSSAQPQQQQQQQQRNQHEQEQPRASTSRAVMPPRSEALTAVRG 254
>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
Length = 1356
Score = 25.4 bits (53), Expect = 1.6
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -2
Query: 114 PGCVSTDRNVRSKCRCSNVSCSSHYDAQLTAFFIDPR 4
P T NVR+ + + V+ S+ + QLTA DPR
Sbjct: 1230 PNISLTHSNVRNSYQLTRVAPSNRTNNQLTAQHQDPR 1266
>AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein
protein.
Length = 541
Score = 25.0 bits (52), Expect = 2.1
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 110 PGPLLSEGRLTREQLLFTRNPSPRQSSRASLEYLLLPPRSAPTEAPSG 253
P P S + ++Q RN ++ RAS + ++ PRS + A G
Sbjct: 183 PLPRRSSAQPQQQQQQQQRNQQEQEQPRASTSHAVMLPRSEASTAVRG 230
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 24.6 bits (51), Expect = 2.8
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -2
Query: 270 EGSGRGPLGASVGADLGG 217
EG+GRG +G+ +G GG
Sbjct: 548 EGAGRGGVGSGIGGGGGG 565
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 24.2 bits (50), Expect = 3.7
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 173 SPRQSSRASLEYLLLPPRSAPTEAPSGPRPD 265
S R+S AS L SAP AP PRP+
Sbjct: 677 SARESCGASALSRKLLTESAPPIAPMSPRPN 707
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 23.8 bits (49), Expect = 4.9
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +2
Query: 218 PPRSAPTEAPSGPRPDPSA 274
PP + P P GP P P A
Sbjct: 581 PPPAPPPPPPMGPPPSPLA 599
>AY341205-1|AAR13769.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 23.0 bits (47), Expect = 8.5
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -3
Query: 485 GVGRS*QQDGGHGSRNPLRSVQRLTCRSNQ 396
G G + GG GS P + L C+ N+
Sbjct: 253 GTGGTGTSSGGGGSFQPPTLTEELLCKHNE 282
>AY341204-1|AAR13768.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 23.0 bits (47), Expect = 8.5
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -3
Query: 485 GVGRS*QQDGGHGSRNPLRSVQRLTCRSNQ 396
G G + GG GS P + L C+ N+
Sbjct: 253 GTGGTGTSSGGGGSFQPPTLTEELLCKHNE 282
>AY341203-1|AAR13767.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 23.0 bits (47), Expect = 8.5
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -3
Query: 485 GVGRS*QQDGGHGSRNPLRSVQRLTCRSNQ 396
G G + GG GS P + L C+ N+
Sbjct: 253 GTGGTGTSSGGGGSFQPPTLTEELLCKHNE 282
>AY341202-1|AAR13766.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 23.0 bits (47), Expect = 8.5
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -3
Query: 485 GVGRS*QQDGGHGSRNPLRSVQRLTCRSNQ 396
G G + GG GS P + L C+ N+
Sbjct: 253 GTGGTGTSSGGGGSFQPPTLTEELLCKHNE 282
>AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled
receptor protein.
Length = 611
Score = 23.0 bits (47), Expect = 8.5
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -2
Query: 267 GSGRGPLGASVGADLGGSS 211
G G G +G +G LGG++
Sbjct: 561 GGGGGGVGGGIGLSLGGAA 579
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
phosphoprotein protein.
Length = 1200
Score = 23.0 bits (47), Expect = 8.5
Identities = 20/58 (34%), Positives = 24/58 (41%)
Frame = -2
Query: 243 ASVGADLGGSSKYSSEALED*RGEGFRVNSSCSRVSRPSDRSGPGCVSTDRNVRSKCR 70
AS D GS + S G G R S SR R+G G S R+ RS+ R
Sbjct: 1052 ASDEEDSDGSQRRSRSRSRS--GSGSRSRSRSGSGSRAGSRAGSGSRSRSRS-RSRSR 1106
>AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein
coupled receptor protein.
Length = 612
Score = 23.0 bits (47), Expect = 8.5
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -2
Query: 267 GSGRGPLGASVGADLGGSS 211
G G G +G +G LGG++
Sbjct: 562 GGGGGGVGGGIGLSLGGAA 580
>AJ302656-1|CAC35521.1| 385|Anopheles gambiae gSG1b protein
protein.
Length = 385
Score = 23.0 bits (47), Expect = 8.5
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +2
Query: 341 VPVTVVYRQNASAPSIFRAGCFGR*VVAHS 430
+P+ V+ ++N +AP+ + A C R H+
Sbjct: 36 IPLEVLEQENGTAPADWSASCTQRRTEDHA 65
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 758,535
Number of Sequences: 2352
Number of extensions: 17484
Number of successful extensions: 317
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 317
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -