Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0304
(798 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n... 74 4e-12
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513... 51 4e-05
UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep: ... 48 3e-04
UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;... 40 0.072
UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 40 0.072
UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3; ... 38 0.39
UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus lu... 36 1.6
UniRef50_A7RZL6 Cluster: Predicted protein; n=1; Nematostella ve... 36 1.6
UniRef50_Q8WXI7 Cluster: Mucin-16; n=23; cellular organisms|Rep:... 34 4.8
UniRef50_UPI0000DA1C3D Cluster: PREDICTED: similar to CCR4-NOT t... 33 6.3
UniRef50_A0E688 Cluster: Chromosome undetermined scaffold_8, who... 33 6.3
>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
Gallus gallus
Length = 103
Score = 74.1 bits (174), Expect = 4e-12
Identities = 38/49 (77%), Positives = 41/49 (83%)
Frame = +2
Query: 506 SGITAAAGTRLALQLFLVKIFKVYSFRLRGLVRVPYRYFSSLPPRAGSG 652
+GITAAAGTRLALQ LVK FKV SF+L+GL RV Y YFSSLPPR GSG
Sbjct: 55 AGITAAAGTRLALQWILVKGFKVDSFQLQGLERVLYCYFSSLPPRVGSG 103
>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY05130 - Plasmodium yoelii yoelii
Length = 402
Score = 50.8 bits (116), Expect = 4e-05
Identities = 36/83 (43%), Positives = 46/83 (55%)
Frame = +2
Query: 506 SGITAAAGTRLALQLFLVKIFKVYSFRLRGLVRVPYRYFSSLPPRAGSG*FARLLPSLDV 685
+GITAAAGTRLALQL K+ + + + PY S L L++
Sbjct: 325 AGITAAAGTRLALQLIFGKVLSSHHSNYKTKIW-PYIVIS-----------CHYLSYLEL 372
Query: 686 VAVSQAPSPESNPDSPLPVTTMV 754
A+SQAPSPESN +SPLPV M+
Sbjct: 373 -AISQAPSPESNSNSPLPVKAML 394
Score = 44.0 bits (99), Expect = 0.004
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +2
Query: 92 GKCFR*CSSCDDPRISPLTSQYECPQ 169
GKCFR C S ++ RISPLTS+Y+CPQ
Sbjct: 259 GKCFRSCLSPENLRISPLTSEYKCPQ 284
Score = 36.7 bits (81), Expect = 0.67
Identities = 23/54 (42%), Positives = 27/54 (50%)
Frame = +3
Query: 474 LTATILVYAIGAELPRLLAPDLPSNCSSLKYLKCTHSDYEAS*ESRIVIFRHYL 635
LTATIL+YAIGA + L K L HS+Y+ IVI HYL
Sbjct: 314 LTATILIYAIGAGITAAAGTRLALQLIFGKVLSSHHSNYKTKIWPYIVISCHYL 367
>UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep:
LRRG00114 - Rattus norvegicus (Rat)
Length = 223
Score = 48.0 bits (109), Expect = 3e-04
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +2
Query: 665 LLPSLDVVAVSQAPSPESNPDSP 733
LLPSLDVVAVSQAPSPE NPDSP
Sbjct: 167 LLPSLDVVAVSQAPSPELNPDSP 189
>UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 493
Score = 39.9 bits (89), Expect = 0.072
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +1
Query: 595 PRKSPVSLFFVTTSPCREW 651
PRKSPV LFFVTTSP REW
Sbjct: 24 PRKSPVLLFFVTTSPGREW 42
>UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 79
Score = 39.9 bits (89), Expect = 0.072
Identities = 18/23 (78%), Positives = 18/23 (78%)
Frame = -2
Query: 83 FHQSRTKVRGSKAIRYRPSSNRK 15
F RTKVRGSK IRYRPSSN K
Sbjct: 6 FRCQRTKVRGSKTIRYRPSSNHK 28
>UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 76
Score = 37.5 bits (83), Expect = 0.39
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +2
Query: 632 PPRAGSG*FARLLPSLDVVAVSQAPSP 712
PP+ SG +RLL +D+VA+SQAPSP
Sbjct: 46 PPKVSSGKVSRLLLPVDIVAISQAPSP 72
>UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 72
Score = 35.5 bits (78), Expect = 1.6
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = -2
Query: 83 FHQSRTKVRGSKAIRYRPSSNRK 15
FH RTKV GSK IRY PS N K
Sbjct: 6 FHCQRTKVGGSKMIRYHPSLNHK 28
>UniRef50_A7RZL6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 73
Score = 35.5 bits (78), Expect = 1.6
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -1
Query: 561 LTRNNWRASLVPAAAVIP 508
LTR +WRASLVPAAAVIP
Sbjct: 31 LTRIHWRASLVPAAAVIP 48
>UniRef50_Q8WXI7 Cluster: Mucin-16; n=23; cellular organisms|Rep:
Mucin-16 - Homo sapiens (Human)
Length = 22152
Score = 33.9 bits (74), Expect = 4.8
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +2
Query: 617 YFSSLPPRAGSG*FARLLPSLDVVAVSQAPSPESNPDSPLPVTTMVVAEL 766
+ ++ P S F+ + PS+ + + SPES P SPLPVT ++ + L
Sbjct: 5621 WMTTPPVEETSSGFSLMSPSMTSPSPVSSTSPESIPSSPLPVTALLTSVL 5670
>UniRef50_UPI0000DA1C3D Cluster: PREDICTED: similar to CCR4-NOT
transcription complex, subunit 3; n=1; Rattus
norvegicus|Rep: PREDICTED: similar to CCR4-NOT
transcription complex, subunit 3 - Rattus norvegicus
Length = 750
Score = 33.5 bits (73), Expect = 6.3
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 623 SSLPPRAGSG*FARLLPSLDVVAVSQAPSPESNPDSPLP 739
+++P G G A P L + A S PSPE PD+PLP
Sbjct: 607 AAIPTGHGRGRLAPHAPPLXLRAHSAVPSPEPLPDTPLP 645
>UniRef50_A0E688 Cluster: Chromosome undetermined scaffold_8, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_8,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 457
Score = 33.5 bits (73), Expect = 6.3
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = -2
Query: 785 LINFSMVVLRL-PWLSRVTGNQGSIPEREPEKRLPHPRKAAGAQIT--HSRHGEVVTKNN 615
++NF MV + + P+L I +R P+K +P PR + AQI HS H + V K N
Sbjct: 67 ILNFDMVSVGIIPYLILTDLINSDIIKRLPKKPIPPPRSSYNAQIDNHHSIHIQNVIKQN 126
Query: 614 DTGL 603
L
Sbjct: 127 AQSL 130
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 791,529,468
Number of Sequences: 1657284
Number of extensions: 16730235
Number of successful extensions: 44323
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 42270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44296
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68319938570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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