Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0304
(798 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 34 0.68
AY210419-1|AAO34702.1| 3501|Homo sapiens CUB and sushi multiple ... 31 4.8
AB114605-1|BAC82444.1| 3667|Homo sapiens CSMD3 protein isoform 2... 31 4.8
AB114604-1|BAC82443.1| 3707|Homo sapiens CSMD3 protein isoform 1... 31 4.8
AB067481-1|BAB67787.2| 2977|Homo sapiens KIAA1894 protein protein. 31 4.8
X80497-1|CAA56662.1| 1235|Homo sapiens phosphorylase kinase prot... 30 8.4
D38616-1|BAA07606.1| 1235|Homo sapiens phosphorylase kinase alph... 30 8.4
BC014036-1|AAH14036.1| 1235|Homo sapiens phosphorylase kinase, a... 30 8.4
AL732509-6|CAI41680.1| 1235|Homo sapiens phosphorylase kinase, a... 30 8.4
AL096700-4|CAB86408.2| 1235|Homo sapiens phosphorylase kinase, a... 30 8.4
AF044572-1|AAD32846.1| 1235|Homo sapiens phosphorylase kinase al... 30 8.4
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 33.9 bits (74), Expect = 0.68
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +2
Query: 617 YFSSLPPRAGSG*FARLLPSLDVVAVSQAPSPESNPDSPLPVTTMVVAEL 766
+ ++ P S F+ + PS+ + + SPES P SPLPVT ++ + L
Sbjct: 5621 WMTTPPVEETSSGFSLMSPSMTSPSPVSSTSPESIPSSPLPVTALLTSVL 5670
>AY210419-1|AAO34702.1| 3501|Homo sapiens CUB and sushi multiple
domains 3 protein.
Length = 3501
Score = 31.1 bits (67), Expect = 4.8
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +1
Query: 613 SLFFVTTSPCREWVICAPAAFLGCGSRFSGSLSG--IEP*FPVTRDNH 750
SL T R W P+ CG RF G SG + P +P DN+
Sbjct: 1250 SLLKCMTGERRAWDYPLPSCIAECGGRFKGESSGRILSPGYPFPYDNN 1297
>AB114605-1|BAC82444.1| 3667|Homo sapiens CSMD3 protein isoform 2
protein.
Length = 3667
Score = 31.1 bits (67), Expect = 4.8
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +1
Query: 613 SLFFVTTSPCREWVICAPAAFLGCGSRFSGSLSG--IEP*FPVTRDNH 750
SL T R W P+ CG RF G SG + P +P DN+
Sbjct: 1351 SLLKCMTGERRAWDYPLPSCIAECGGRFKGESSGRILSPGYPFPYDNN 1398
>AB114604-1|BAC82443.1| 3707|Homo sapiens CSMD3 protein isoform 1
protein.
Length = 3707
Score = 31.1 bits (67), Expect = 4.8
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +1
Query: 613 SLFFVTTSPCREWVICAPAAFLGCGSRFSGSLSG--IEP*FPVTRDNH 750
SL T R W P+ CG RF G SG + P +P DN+
Sbjct: 1391 SLLKCMTGERRAWDYPLPSCIAECGGRFKGESSGRILSPGYPFPYDNN 1438
>AB067481-1|BAB67787.2| 2977|Homo sapiens KIAA1894 protein protein.
Length = 2977
Score = 31.1 bits (67), Expect = 4.8
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +1
Query: 613 SLFFVTTSPCREWVICAPAAFLGCGSRFSGSLSG--IEP*FPVTRDNH 750
SL T R W P+ CG RF G SG + P +P DN+
Sbjct: 731 SLLKCMTGERRAWDYPLPSCIAECGGRFKGESSGRILSPGYPFPYDNN 778
>X80497-1|CAA56662.1| 1235|Homo sapiens phosphorylase kinase
protein.
Length = 1235
Score = 30.3 bits (65), Expect = 8.4
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 359 LNRRFLERRLTDDMLRKRVSITADACTDSAAHK 457
LN+ + R +LRK+V + A+ACTD +H+
Sbjct: 816 LNQEWGLIRYISGLLRKKVEVLAEACTDLLSHQ 848
>D38616-1|BAA07606.1| 1235|Homo sapiens phosphorylase kinase alpha
subunit protein.
Length = 1235
Score = 30.3 bits (65), Expect = 8.4
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 359 LNRRFLERRLTDDMLRKRVSITADACTDSAAHK 457
LN+ + R +LRK+V + A+ACTD +H+
Sbjct: 816 LNQEWGLIRYISGLLRKKVEVLAEACTDLLSHQ 848
>BC014036-1|AAH14036.1| 1235|Homo sapiens phosphorylase kinase,
alpha 2 (liver) protein.
Length = 1235
Score = 30.3 bits (65), Expect = 8.4
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 359 LNRRFLERRLTDDMLRKRVSITADACTDSAAHK 457
LN+ + R +LRK+V + A+ACTD +H+
Sbjct: 816 LNQEWGLIRYISGLLRKKVEVLAEACTDLLSHQ 848
>AL732509-6|CAI41680.1| 1235|Homo sapiens phosphorylase kinase,
alpha 2 (liver) protein.
Length = 1235
Score = 30.3 bits (65), Expect = 8.4
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 359 LNRRFLERRLTDDMLRKRVSITADACTDSAAHK 457
LN+ + R +LRK+V + A+ACTD +H+
Sbjct: 816 LNQEWGLIRYISGLLRKKVEVLAEACTDLLSHQ 848
>AL096700-4|CAB86408.2| 1235|Homo sapiens phosphorylase kinase,
alpha 2 (liver) protein.
Length = 1235
Score = 30.3 bits (65), Expect = 8.4
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 359 LNRRFLERRLTDDMLRKRVSITADACTDSAAHK 457
LN+ + R +LRK+V + A+ACTD +H+
Sbjct: 816 LNQEWGLIRYISGLLRKKVEVLAEACTDLLSHQ 848
>AF044572-1|AAD32846.1| 1235|Homo sapiens phosphorylase kinase alpha
subunit protein.
Length = 1235
Score = 30.3 bits (65), Expect = 8.4
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 359 LNRRFLERRLTDDMLRKRVSITADACTDSAAHK 457
LN+ + R +LRK+V + A+ACTD +H+
Sbjct: 816 LNQEWGLIRYISGLLRKKVEVLAEACTDLLSHQ 848
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,051,270
Number of Sequences: 237096
Number of extensions: 2501622
Number of successful extensions: 6358
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6358
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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