Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0301
(616 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93376-2|CAD59146.2| 578|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z82279-4|CAD59150.2| 578|Caenorhabditis elegans Hypothetical pr... 29 3.5
AL132949-42|CAD59173.2| 578|Caenorhabditis elegans Hypothetical... 29 3.5
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 27 8.1
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 27 8.1
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z70037-4|CAA93877.1| 146|Caenorhabditis elegans Hypothetical pr... 27 8.1
DQ178242-1|ABA18181.1| 578|Caenorhabditis elegans Frizzled homo... 27 8.1
AF016413-2|ABA54421.1| 578|Caenorhabditis elegans Caenorhabditi... 27 8.1
AF016413-1|ABA54422.1| 550|Caenorhabditis elegans Caenorhabditi... 27 8.1
AB026113-1|BAA84678.1| 550|Caenorhabditis elegans Cfz2 protein. 27 8.1
>Z93376-2|CAD59146.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 28.7 bits (61), Expect = 3.5
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = -2
Query: 267 STGLS*TPLRPKPA*PNPARICSLWSPESREALNN---VTLLVAFRIQNARRDVEAHLD 100
ST S T L PA PN AR S W E+ + NN + + +I +R++ H+D
Sbjct: 113 STVTSATGLPTVPAEPNKARSSSYWKTEASPSNNNEHETPVDLLRKISVSRKESGTHVD 171
>Z82279-4|CAD59150.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 28.7 bits (61), Expect = 3.5
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = -2
Query: 267 STGLS*TPLRPKPA*PNPARICSLWSPESREALNN---VTLLVAFRIQNARRDVEAHLD 100
ST S T L PA PN AR S W E+ + NN + + +I +R++ H+D
Sbjct: 113 STVTSATGLPTVPAEPNKARSSSYWKTEASPSNNNEHETPVDLLRKISVSRKESGTHVD 171
>AL132949-42|CAD59173.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 28.7 bits (61), Expect = 3.5
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = -2
Query: 267 STGLS*TPLRPKPA*PNPARICSLWSPESREALNN---VTLLVAFRIQNARRDVEAHLD 100
ST S T L PA PN AR S W E+ + NN + + +I +R++ H+D
Sbjct: 113 STVTSATGLPTVPAEPNKARSSSYWKTEASPSNNNEHETPVDLLRKISVSRKESGTHVD 171
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 27.9 bits (59), Expect = 6.1
Identities = 21/101 (20%), Positives = 41/101 (40%)
Frame = +3
Query: 15 PRHLTXLYPDLRSRDARVKKQTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGS 194
P + +Y DL+ ++ S++ N R++ + R + PD G
Sbjct: 1142 PMDVYQVYQDLKRVKFDRERLNGSLE-EQLNKARKQKKNLAAKKRQMVKTQTAAPDYDGR 1200
Query: 195 TVSISLPDSARLASALEAFRIIPWMVASHHRPLGRVHEPNV 317
+ ++ D LA+ E ++ + H R L + HE N+
Sbjct: 1201 NIDLNESDQQTLATLTEQIKVTQAEIELHRRDL-KKHESNL 1240
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 27.9 bits (59), Expect = 6.1
Identities = 21/101 (20%), Positives = 41/101 (40%)
Frame = +3
Query: 15 PRHLTXLYPDLRSRDARVKKQTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGS 194
P + +Y DL+ ++ S++ N R++ + R + PD G
Sbjct: 1142 PMDVYQVYQDLKRVKFDRERLNGSLE-EQLNKARKQKKNLAAKKRQMVKTQTAAPDYDGR 1200
Query: 195 TVSISLPDSARLASALEAFRIIPWMVASHHRPLGRVHEPNV 317
+ ++ D LA+ E ++ + H R L + HE N+
Sbjct: 1201 NIDLNESDQQTLATLTEQIKVTQAEIELHRRDL-KKHESNL 1240
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -1
Query: 556 VTTGITGL----WQPSVHSDLLFDPSMSALPIIAKQNSPSV 446
VTTG++ L W P+ + DP+ S P+ A+ S SV
Sbjct: 2255 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2295
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -1
Query: 556 VTTGITGL----WQPSVHSDLLFDPSMSALPIIAKQNSPSV 446
VTTG++ L W P+ + DP+ S P+ A+ S SV
Sbjct: 2277 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2317
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical protein
R11A8.7d protein.
Length = 1427
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -1
Query: 556 VTTGITGL----WQPSVHSDLLFDPSMSALPIIAKQNSPSV 446
VTTG++ L W P+ + DP+ S P+ A+ S SV
Sbjct: 1098 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 1138
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical protein
R11A8.7c protein.
Length = 1405
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -1
Query: 556 VTTGITGL----WQPSVHSDLLFDPSMSALPIIAKQNSPSV 446
VTTG++ L W P+ + DP+ S P+ A+ S SV
Sbjct: 1076 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 1116
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -1
Query: 556 VTTGITGL----WQPSVHSDLLFDPSMSALPIIAKQNSPSV 446
VTTG++ L W P+ + DP+ S P+ A+ S SV
Sbjct: 2255 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2295
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -1
Query: 556 VTTGITGL----WQPSVHSDLLFDPSMSALPIIAKQNSPSV 446
VTTG++ L W P+ + DP+ S P+ A+ S SV
Sbjct: 2277 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2317
>Z70037-4|CAA93877.1| 146|Caenorhabditis elegans Hypothetical
protein T27D12.3 protein.
Length = 146
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 298 RPSGRWCEATIHGIILNASKAEAS 227
RPSG WC G+ L ++ EAS
Sbjct: 35 RPSGPWCVKLFVGLYLQGNRNEAS 58
>DQ178242-1|ABA18181.1| 578|Caenorhabditis elegans Frizzled homolog
protein.
Length = 578
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 26 NXVISGPSEP*CTC*ETNR*HRSPRSKWASTSRLAF 133
N VI+GPSE CTC + + S +SK + + A+
Sbjct: 184 NEVIAGPSECQCTCNQPFQFVASEKSKVGNVTNCAY 219
>AF016413-2|ABA54421.1| 578|Caenorhabditis elegans Caenorhabditis
frizzled homologprotein 2, isoform a protein.
Length = 578
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 26 NXVISGPSEP*CTC*ETNR*HRSPRSKWASTSRLAF 133
N VI+GPSE CTC + + S +SK + + A+
Sbjct: 184 NEVIAGPSECQCTCNQPFQFVASEKSKVGNVTNCAY 219
>AF016413-1|ABA54422.1| 550|Caenorhabditis elegans Caenorhabditis
frizzled homologprotein 2, isoform b protein.
Length = 550
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 26 NXVISGPSEP*CTC*ETNR*HRSPRSKWASTSRLAF 133
N VI+GPSE CTC + + S +SK + + A+
Sbjct: 184 NEVIAGPSECQCTCNQPFQFVASEKSKVGNVTNCAY 219
>AB026113-1|BAA84678.1| 550|Caenorhabditis elegans Cfz2 protein.
Length = 550
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 26 NXVISGPSEP*CTC*ETNR*HRSPRSKWASTSRLAF 133
N VI+GPSE CTC + + S +SK + + A+
Sbjct: 184 NEVIAGPSECQCTCNQPFQFVASEKSKVGNVTNCAY 219
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,039,921
Number of Sequences: 27780
Number of extensions: 287533
Number of successful extensions: 843
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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