Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0299
(640 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23574| Best HMM Match : efhand (HMM E-Value=2e-05) 57 1e-08
SB_46583| Best HMM Match : Hus1 (HMM E-Value=0) 46 2e-05
SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39) 46 3e-05
SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39) 46 3e-05
SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26) 45 5e-05
SB_50692| Best HMM Match : efhand (HMM E-Value=1.5e-15) 43 2e-04
SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29) 42 3e-04
SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41) 42 6e-04
SB_45639| Best HMM Match : efhand (HMM E-Value=9.1e-08) 41 0.001
SB_16922| Best HMM Match : DUF1647 (HMM E-Value=2e-07) 38 0.005
SB_10943| Best HMM Match : efhand (HMM E-Value=6.4e-07) 38 0.005
SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.037
SB_10944| Best HMM Match : efhand (HMM E-Value=7.4e-24) 35 0.049
SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_3800| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.34
SB_3425| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.79
SB_16925| Best HMM Match : efhand (HMM E-Value=3e-22) 31 0.79
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_29567| Best HMM Match : Polysacc_deac_1 (HMM E-Value=7.7) 28 5.6
SB_56834| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_45638| Best HMM Match : efhand (HMM E-Value=0.00028) 28 7.4
SB_43877| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_53411| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
>SB_23574| Best HMM Match : efhand (HMM E-Value=2e-05)
Length = 69
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/64 (43%), Positives = 41/64 (64%)
Frame = -3
Query: 509 FLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 330
F+EC K++D+N NGL+ AEL H L +LG+KL D EV + + ED+ G + Y F+
Sbjct: 7 FMECFKVFDRNGNGLIGAAELRHLLASLGDKLSDEEVDNL---MVGFEDNQGQVFYEDFV 63
Query: 329 KKVM 318
+ VM
Sbjct: 64 RAVM 67
>SB_46583| Best HMM Match : Hus1 (HMM E-Value=0)
Length = 646
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/66 (36%), Positives = 39/66 (59%)
Frame = -3
Query: 539 ERQRPGSV*RFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDD 360
++++ GS F+E L+++D++ G +L AEL L++LGEKL D EV + +D
Sbjct: 581 QKKQTGSADEFVEGLRVFDRDGTGTVLAAELRSVLMSLGEKLSDEEVTTLFAPV---DDS 637
Query: 359 DGMIPY 342
G I Y
Sbjct: 638 SGHINY 643
>SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 659
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/54 (40%), Positives = 32/54 (59%)
Frame = -3
Query: 503 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPY 342
E +++DK+ NG + AEL H + LGEKL D EV E+ ++ D DG + Y
Sbjct: 77 EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DIDGDGQVNY 128
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = -3
Query: 509 FLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 330
F E L+DK+ +G + EL + +LG+ ++E+ ++ + D +G I + FL
Sbjct: 2 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNGTIDFPEFL 59
>SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 250
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/54 (40%), Positives = 32/54 (59%)
Frame = -3
Query: 503 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPY 342
E +++DK+ NG + AEL H + LGEKL D EV E+ ++ D DG + Y
Sbjct: 77 EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DIDGDGQVNY 128
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = -3
Query: 509 FLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 330
F E L+DK+ +G + EL + +LG+ ++E+ ++ + D +G I + FL
Sbjct: 2 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNGTIDFPEFL 59
>SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/54 (40%), Positives = 32/54 (59%)
Frame = -3
Query: 503 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPY 342
E +++DK+ NG + AEL H + LGEKL D EV E+ ++ D DG + Y
Sbjct: 88 EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DIDGDGQVNY 139
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = -3
Query: 509 FLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 330
F E L+DK+ +G + EL + +LG+ ++E+ ++ + D +G I + FL
Sbjct: 13 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNGTIDFPEFL 70
>SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26)
Length = 213
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = -3
Query: 503 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPY 342
E +++DK+ NG + AEL H + LGEKL D EV E+ + D DG + Y
Sbjct: 52 EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVEEMIMEA--DIDGDGQVNY 103
>SB_50692| Best HMM Match : efhand (HMM E-Value=1.5e-15)
Length = 150
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/64 (35%), Positives = 36/64 (56%)
Frame = -3
Query: 509 FLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 330
F++ L+++D + +G++ EL H L LGEKL DSEV + + ED G I F+
Sbjct: 88 FVDSLRVFDNDGSGMINEGELRHILTTLGEKLTDSEVDSLIQGL---EDKQGQIDCEEFI 144
Query: 329 KKVM 318
V+
Sbjct: 145 LSVL 148
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = -3
Query: 503 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 330
E +LYDK + + ++L L LG+ ++EV ++ + MDPE + I + FL
Sbjct: 15 ESFELYDKQGDEKIDSSQLGEVLRGLGQNPTNAEVKKIVSE-MDPEGGN-RISFEEFL 70
>SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29)
Length = 420
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/54 (38%), Positives = 33/54 (61%)
Frame = -3
Query: 503 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPY 342
+ K++DKN +G++ +EL + LGE+L D EV E+ ++ D DGMI Y
Sbjct: 367 DAFKVFDKNGDGMISSSELKLVMSNLGERLTDDEVDEMIREA--DIDGDGMIDY 418
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/102 (23%), Positives = 51/102 (50%)
Frame = -3
Query: 626 NHRETRWYKEEGREAAXTRRVPSHLQPSKERQRPGSV*RFLECLKLYDKNENGLMLGAEL 447
N+++ R ++ GR+ ++ + +E+ V E L+DK+ G + +EL
Sbjct: 254 NNQKYRNFRLNGRKPLSKNQL-LEISSVREKLSEEQVAELKEAFALFDKDGGGSISSSEL 312
Query: 446 THTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLKKV 321
H + +LG+ + E+ ++ + +DD+G I + FL+ V
Sbjct: 313 AHVMRSLGQNPTEQELKDMIAEV--DQDDNGEIDFPEFLQMV 352
>SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41)
Length = 153
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/74 (29%), Positives = 40/74 (54%)
Frame = -3
Query: 542 KERQRPGSV*RFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPED 363
K+ Q + E +++D+N +G + EL + +LGEKL D E+ E+ ++ D
Sbjct: 64 KQMQHRDAEAEMREAFRVFDRNGDGSISEWELRSVMASLGEKLSDDEIKEMMREA--DLD 121
Query: 362 DDGMIPYAAFLKKV 321
DG+I + F++ V
Sbjct: 122 GDGVINFQEFVQMV 135
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = -3
Query: 491 LYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 330
L+DK+ +G + EL + +LG+ D E+ ++ ++ D +G + + FL
Sbjct: 8 LFDKDGSGTISNEELEVVMKSLGQNPSDEELQQMIQEV--DADGNGEVDFEEFL 59
>SB_45639| Best HMM Match : efhand (HMM E-Value=9.1e-08)
Length = 144
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/80 (30%), Positives = 41/80 (51%)
Frame = -3
Query: 554 LQPSKERQRPGSV*RFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCM 375
L S ++ G + F+E L+ +D N +G M A+L + L +LG+ L + + +
Sbjct: 68 LYVSYSKKPQGGMEEFIEGLRAFDNNSDGTMSSAQLRNLLTSLGDTLTPDQADAI----V 123
Query: 374 DPEDDDGMIPYAAFLKKVMA 315
+D+ G I Y + KVMA
Sbjct: 124 ALQDNHGTIEYEKLVDKVMA 143
>SB_16922| Best HMM Match : DUF1647 (HMM E-Value=2e-07)
Length = 422
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/63 (28%), Positives = 36/63 (57%)
Frame = -3
Query: 506 LECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLK 327
++C K +D++++G + + L H L +LGE+L D E ++ ++ G I Y +K
Sbjct: 359 IDCFKHFDRSDSGYISSSMLRHVLTSLGERLSDEEFDALSSGYVNAR---GEIDYENMVK 415
Query: 326 KVM 318
+V+
Sbjct: 416 EVL 418
>SB_10943| Best HMM Match : efhand (HMM E-Value=6.4e-07)
Length = 154
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/63 (28%), Positives = 36/63 (57%)
Frame = -3
Query: 506 LECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLK 327
++C K +D++++G + + L H L +LGE+L D E ++ ++ G I Y +K
Sbjct: 91 IDCFKHFDRSDSGYISSSMLRHVLTSLGERLSDEEFDALSSGYVNAR---GEIDYENMVK 147
Query: 326 KVM 318
+V+
Sbjct: 148 EVL 150
>SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 35.5 bits (78), Expect = 0.037
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = -3
Query: 503 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLKK 324
E L+DK+ NGL+ E+ +G + + E E+ K D DG I Y F
Sbjct: 92 EAFSLFDKDGNGLISAQEMKFVFTCMGFNITEKEAVELVKQA--DMDGDGHINYEEFKNA 149
Query: 323 VMA 315
M+
Sbjct: 150 FMS 152
Score = 34.3 bits (75), Expect = 0.085
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -3
Query: 503 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPY 342
E L+DK+ NGL+ E+ L +G + + E E+ K D DG I Y
Sbjct: 221 EAFSLFDKDGNGLISAQEMKFVLTCMGFNITEKEAVELVKQA--DIDGDGHINY 272
>SB_10944| Best HMM Match : efhand (HMM E-Value=7.4e-24)
Length = 127
Score = 35.1 bits (77), Expect = 0.049
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = -3
Query: 506 LECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLK 327
L+ KL+D +E G + L LGE L D E+ E+ + D DG I A FL+
Sbjct: 62 LKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEA--DRDGDGEINEAEFLR 119
>SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -2
Query: 600 RRRARSCXHSKSSFPSTAKQRKTKTRERMKIPGMSEAV*QERKRSHAW 457
RRR+RS HS SS + + +++ R R + S + +R+RS +W
Sbjct: 691 RRRSRSSSHSSSSLSRSRSRSRSRGRGRRRSRSRSSSRKGKRQRSRSW 738
>SB_3800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 32.3 bits (70), Expect = 0.34
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = -3
Query: 536 RQRPGSV*RFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDD 357
R +P + + ++ D+++ G + ELT + GE EV E+ +DPE
Sbjct: 55 RYKPAPEDQLSKAFEVLDQDKKGYLTTEELTKYMTEEGEAFTQEEVEEMLSAAVDPE--K 112
Query: 356 GMIPYAAFL 330
G+I Y F+
Sbjct: 113 GVIFYKDFV 121
>SB_3425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 31.1 bits (67), Expect = 0.79
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = -3
Query: 503 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 330
+ +++D+N +G + EL + LG+ L E E+ M +D DG + Y F+
Sbjct: 221 QAFRVFDRNGDGYISAEELRVAVTTLGDALTQDEAEELIG--MLDQDGDGKLGYEEFV 276
>SB_16925| Best HMM Match : efhand (HMM E-Value=3e-22)
Length = 132
Score = 31.1 bits (67), Expect = 0.79
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = -3
Query: 503 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLK 327
+ ++DK+ +G + EL + LGE D E+ ++ D +D G I +A F++
Sbjct: 7 DVFSMFDKDNSGSIDTDELRDVMRELGENPSDKEIQDMIADA--DKDGSGEIRFAQFMQ 63
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = -2
Query: 573 SKSSFPSTAKQRKTKTRERMKIPGMSEAV*QERKRSHAWR 454
SK+S P + K + R+R ++ +S+A+ K SHAWR
Sbjct: 1422 SKTSLPWITQSVKRQIRKRDRL--LSKALKSNNKNSHAWR 1459
>SB_29567| Best HMM Match : Polysacc_deac_1 (HMM E-Value=7.7)
Length = 760
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -3
Query: 620 RETRWYKEEGREAAXTRRVPSHLQPSKERQRPGSV*R 510
R ++WY A T V +H++ R+RP SV R
Sbjct: 715 RRSQWYHIRAFVLAYTNSVATHVEADPSRRRPPSVDR 751
>SB_56834| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = -2
Query: 627 QPSRNSVVQRRRARSCXHSKSSFPSTAKQRKTKTRERMKIPGMSEAV*QERKRSHA 460
QPSR S V+ + + SKS S A + +R R+ G + + R+ S A
Sbjct: 446 QPSRRSTVRPKVRPTALPSKSGSRSAASRTSRSSRSRITSSGSTRSNRSNRRSSSA 501
>SB_45638| Best HMM Match : efhand (HMM E-Value=0.00028)
Length = 146
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/74 (25%), Positives = 33/74 (44%)
Frame = -3
Query: 536 RQRPGSV*RFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDD 357
+++P + FLE LK++D+ NG + L G+K+ + E + D
Sbjct: 74 KKKPPAKEDFLEGLKVFDREANGKIDSGTFRGLLCNRGDKITEEEADAILAGHEDTV--K 131
Query: 356 GMIPYAAFLKKVMA 315
G + Y + VMA
Sbjct: 132 GEVDYNELIDFVMA 145
>SB_43877| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -3
Query: 389 TKDCMDPEDDDGMIPYAAFLKKVMA*KTSQLVISLVIRS 273
+KD +D D PY LK + A SQLV S ++ S
Sbjct: 21 SKDALDAITGDHFNPYCKDLKDISAAPKSQLVASAILLS 59
>SB_53411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 556
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 211 PQSRASVF*GPSHRTSSQESYDLITKDMTSCDV 309
PQ+R S + SS ES D+ K +SCD+
Sbjct: 281 PQARVSAWRDHRRYYSSPESSDMSLKSFSSCDI 313
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,349,570
Number of Sequences: 59808
Number of extensions: 322368
Number of successful extensions: 920
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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