Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0299
         (640 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1 pro...   112   1e-26
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         26   0.88 
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           25   2.7  
AY187043-1|AAO39757.1|  171|Anopheles gambiae putative antennal ...    23   6.2  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    23   8.2  
AY146728-1|AAO12088.1|  131|Anopheles gambiae odorant-binding pr...    23   8.2  

>AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1
           protein protein.
          Length = 160

 Score =  112 bits (269), Expect = 1e-26
 Identities = 55/83 (66%), Positives = 64/83 (77%)
 Frame = -3

Query: 566 VPSHLQPSKERQRPGSV*RFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVT 387
           +P   Q  KE+++ G    FLECLKLYDKNE+G ML AELTH+L ALGE+LDD E+  V 
Sbjct: 69  LPIFSQVKKEKEQ-GCFEDFLECLKLYDKNEDGTMLLAELTHSLTALGERLDDVELDNVM 127

Query: 386 KDCMDPEDDDGMIPYAAFLKKVM 318
           KDCMDPEDDDG IPYA FLKK+M
Sbjct: 128 KDCMDPEDDDGNIPYAPFLKKMM 150



 Score = 36.7 bits (81), Expect = 6e-04
 Identities = 18/44 (40%), Positives = 23/44 (52%)
 Frame = -1

Query: 640 NPTLATIXXXXXXXXXXXXXXXXXEFLPIYSQAKKDKDQGAYED 509
           NPT+  I                 EFLPI+SQ KK+K+QG +ED
Sbjct: 43  NPTIELIGKMGGTQKRGEKKIKFEEFLPIFSQVKKEKEQGCFED 86


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 26.2 bits (55), Expect = 0.88
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 425  GEKLDDSEVAEVTKDCMDPEDDDG 354
            G K+++  +AEV K  +D EDD G
Sbjct: 1250 GLKMENGVIAEVEKSQVDGEDDTG 1273



 Score = 23.0 bits (47), Expect = 8.2
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +2

Query: 392  LQRLHCRQASHLVQEACV*AQRQA*DRFRSCHTASD 499
            ++RL C +   LV+E     +R+  DRF   H  S+
Sbjct: 1783 IKRLSCAEICQLVKERARAKRREDVDRFDLQHADSN 1818


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 11/45 (24%), Positives = 20/45 (44%)
 Frame = +1

Query: 184 PPRALPAPVPQSRASVF*GPSHRTSSQESYDLITKDMTSCDVFYA 318
           PP  +  P+P   AS     S  + S   YD + ++  +   ++A
Sbjct: 30  PPVPMLVPIPSRTASTGSASSGHSGSSSLYDRVPREHATSSPYHA 74


>AY187043-1|AAO39757.1|  171|Anopheles gambiae putative antennal
           carrier protein AP-1 protein.
          Length = 171

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -3

Query: 455 AELTHTLLALGEKLDDSEVAEVTKDCMDP 369
           AE    ++      DD    +VT++C+DP
Sbjct: 64  AESFKCVIVKNSTKDDVNKVQVTRECLDP 92


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 546 KQRKTKTRERMKIPGMS 496
           + RKT+ R  M++PGMS
Sbjct: 349 RPRKTRLRWMMEMPGMS 365


>AY146728-1|AAO12088.1|  131|Anopheles gambiae odorant-binding
           protein AgamOBP21 protein.
          Length = 131

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
 Frame = -3

Query: 461 LGAELTH---TLLALGEKLDDSEVAEVTKDCM 375
           LG EL     T + LG+   DSE A+ T  CM
Sbjct: 35  LGGELPEDFATKMRLGDLTLDSETAKCTIQCM 66


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 572,818
Number of Sequences: 2352
Number of extensions: 10012
Number of successful extensions: 73
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)