Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0299
(640 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light c... 69 3e-12
L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin l... 69 3e-12
AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin pr... 48 6e-06
AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin pr... 48 6e-06
Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical... 46 3e-05
Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical pr... 38 0.006
X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein. 38 0.006
U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical pr... 36 0.018
Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical pr... 36 0.024
AF106590-2|AAC78237.2| 301|Caenorhabditis elegans Hypothetical ... 33 0.13
U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin rela... 32 0.30
Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical pr... 31 0.92
U97405-6|AAB53013.2| 142|Caenorhabditis elegans Hypothetical pr... 30 1.6
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 28 4.9
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 28 6.5
M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light ch... 27 8.6
M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light ch... 27 8.6
AL032644-7|CAA21670.1| 354|Caenorhabditis elegans Hypothetical ... 27 8.6
AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light ... 27 8.6
AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light ... 27 8.6
>U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light
chain protein 3, isoforma protein.
Length = 153
Score = 68.9 bits (161), Expect = 3e-12
Identities = 38/84 (45%), Positives = 54/84 (64%)
Frame = -3
Query: 566 VPSHLQPSKERQRPGSV*RFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVT 387
+P + Q +KE+++ G+ F E LK++DK E G +L AEL H LLALGE+L E E+
Sbjct: 67 LPMYEQLAKEKEQ-GTYADFYEGLKVFDKEETGKILAAELRHILLALGERLSADEADELL 125
Query: 386 KDCMDPEDDDGMIPYAAFLKKVMA 315
K ED +GM+ Y F+KKV+A
Sbjct: 126 KGV---EDGEGMVKYEDFIKKVLA 146
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -1
Query: 565 FLPIYSQAKKDKDQGAYEDSWNV*SCMTRTKTVSCLA 455
+LP+Y Q K+K+QG Y D + + +T LA
Sbjct: 66 WLPMYEQLAKEKEQGTYADFYEGLKVFDKEETGKILA 102
>L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin
light chain protein.
Length = 153
Score = 68.9 bits (161), Expect = 3e-12
Identities = 38/84 (45%), Positives = 54/84 (64%)
Frame = -3
Query: 566 VPSHLQPSKERQRPGSV*RFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVT 387
+P + Q +KE+++ G+ F E LK++DK E G +L AEL H LLALGE+L E E+
Sbjct: 67 LPMYEQLAKEKEQ-GTYADFYEGLKVFDKEETGKILAAELRHILLALGERLSADEADELL 125
Query: 386 KDCMDPEDDDGMIPYAAFLKKVMA 315
K ED +GM+ Y F+KKV+A
Sbjct: 126 KGV---EDGEGMVKYEDFIKKVLA 146
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -1
Query: 565 FLPIYSQAKKDKDQGAYEDSWNV*SCMTRTKTVSCLA 455
+LP+Y Q K+K+QG Y D + + +T LA
Sbjct: 66 WLPMYEQLAKEKEQGTYADFYEGLKVFDKEETGKILA 102
>AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin
protein.
Length = 149
Score = 48.0 bits (109), Expect = 6e-06
Identities = 23/58 (39%), Positives = 34/58 (58%)
Frame = -3
Query: 503 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 330
E +++DK+ NG + AEL H + LGEKL D EV E+ ++ D DG + Y F+
Sbjct: 88 EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DIDGDGQVNYEEFV 143
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = -3
Query: 509 FLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 330
F E L+DK+ +G + EL + +LG+ ++E+ ++ + D +G I + FL
Sbjct: 13 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNGTIDFPEFL 70
>AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin
protein 1 protein.
Length = 149
Score = 48.0 bits (109), Expect = 6e-06
Identities = 23/58 (39%), Positives = 34/58 (58%)
Frame = -3
Query: 503 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 330
E +++DK+ NG + AEL H + LGEKL D EV E+ ++ D DG + Y F+
Sbjct: 88 EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DIDGDGQVNYEEFV 143
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = -3
Query: 509 FLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 330
F E L+DK+ +G + EL + +LG+ ++E+ ++ + D +G I + FL
Sbjct: 13 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNGTIDFPEFL 70
>Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical
protein T12D8.6 protein.
Length = 142
Score = 45.6 bits (103), Expect = 3e-05
Identities = 29/83 (34%), Positives = 44/83 (53%)
Frame = -3
Query: 566 VPSHLQPSKERQRPGSV*RFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVT 387
VP SK R++ +V F+E L +DK NG++ AEL H L LGE+L D +V ++
Sbjct: 62 VPIFQSVSKNREKH-TVEEFVEGLSHFDKEGNGMINVAELRHLLTTLGERLSDEDVDQLL 120
Query: 386 KDCMDPEDDDGMIPYAAFLKKVM 318
D G + + F++ VM
Sbjct: 121 S---GHNDSHGNVNISDFVRAVM 140
>AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical
protein Y73B3A.12 protein.
Length = 116
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = -3
Query: 503 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAF 333
E +++DK+ NG + AEL H + LGEKL D EV E+ ++ D DG I +F
Sbjct: 37 EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DIDGDGQIMRVSF 91
>Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical
protein K04C1.4 protein.
Length = 143
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/83 (31%), Positives = 43/83 (51%)
Frame = -3
Query: 566 VPSHLQPSKERQRPGSV*RFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVT 387
V SH++ +K P S+ F++ L +DK G + AEL L +G+KL D E ++
Sbjct: 67 VLSHVRNNKI---PYSMEDFIKGLSHFDKEGEGFITSAELRQVLTTMGDKLSDEEFDKLV 123
Query: 386 KDCMDPEDDDGMIPYAAFLKKVM 318
++D+G I F+K +M
Sbjct: 124 AG----QEDNGKIKIETFVKTIM 142
>Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical
protein C13C12.1 protein.
Length = 218
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = -3
Query: 503 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLK 327
E +++DK+ NG++ E + ++ +G + + EV E+ K+ D DG I Y F+K
Sbjct: 157 EAFRVFDKDGNGVITAQEFRYFMVHMGMQFSEEEVDEMIKEV--DVDGDGEIDYEEFVK 213
Score = 33.5 bits (73), Expect = 0.13
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Frame = -3
Query: 566 VPSHLQPSKE----RQRPGSV*RFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEV 399
+PS+L E + P + F E ++DK+ NG + EL + +LG+ + E+
Sbjct: 60 IPSNLMQFSEDIIKQLTPEEIDEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEI 119
Query: 398 AEVTKDCMDPEDDDGMIPYAAF---LKKVMA*KTSQLV 294
E+ + D +G I + F +K++M S+++
Sbjct: 120 LEMINEV--DIDGNGQIEFPEFCVMMKRMMKETDSEMI 155
>X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein.
Length = 161
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = -3
Query: 503 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLK 327
E +++DK+ NG++ E + ++ +G + + EV E+ K+ D DG I Y F+K
Sbjct: 100 EAFRVFDKDGNGVITAQEFRYFMVHMGMQFSEEEVDEMIKEV--DVDGDGEIDYEEFVK 156
Score = 33.5 bits (73), Expect = 0.13
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Frame = -3
Query: 566 VPSHLQPSKE----RQRPGSV*RFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEV 399
+PS+L E + P + F E ++DK+ NG + EL + +LG+ + E+
Sbjct: 3 IPSNLMQFSEDIIKQLTPEEIDEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEI 62
Query: 398 AEVTKDCMDPEDDDGMIPYAAF---LKKVMA*KTSQLV 294
E+ + D +G I + F +K++M S+++
Sbjct: 63 LEMINEV--DIDGNGQIEFPEFCVMMKRMMKETDSEMI 98
>U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical
protein F12A10.5 protein.
Length = 145
Score = 36.3 bits (80), Expect = 0.018
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = -3
Query: 503 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 330
+ ++DKN +G++ +L + LGEKL ++E E+ K D DGMI + F+
Sbjct: 84 DVFNVFDKNGDGVISIDDLIFVMCQLGEKLTETEAKEMIK--QGDLDHDGMIDFQEFV 139
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = -3
Query: 503 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 330
E + +DKN +G + EL LL LGEK +S++ + + D +G I FL
Sbjct: 11 EVFREFDKNGDGRITRQELEVALLQLGEKASNSKIETMIEQA--DLDGNGCIDIDEFL 66
>Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical
protein T07G12.1 protein.
Length = 182
Score = 35.9 bits (79), Expect = 0.024
Identities = 14/46 (30%), Positives = 28/46 (60%)
Frame = -3
Query: 494 KLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDD 357
K++DK+ NG + E H + +GE+ + EV E+ ++ +D + D+
Sbjct: 102 KVFDKDGNGYITAQEFKHFMTTMGERFSEEEVDEIIRE-VDKDGDE 146
Score = 31.1 bits (67), Expect = 0.70
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Frame = -3
Query: 527 PGSV*RFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMI 348
P + F + KL+DK+ N M EL + LG + E+ + + D +G I
Sbjct: 19 PEELQEFAQAFKLFDKDGNNTMNIKELGEAMRMLGLNPTEEELLNMVNEY--DVDGNGKI 76
Query: 347 PYAAFLK--KVMA*KTSQLVISLVIR 276
+ F K K M +T Q +I L +
Sbjct: 77 DFGEFCKMMKEMNKETDQELIRLAFK 102
>AF106590-2|AAC78237.2| 301|Caenorhabditis elegans Hypothetical
protein F08B6.3 protein.
Length = 301
Score = 33.5 bits (73), Expect = 0.13
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = -3
Query: 491 LYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLK 327
+YDKN++G + G ELT LL G E + + D D DG + Y +K
Sbjct: 223 VYDKNKDGKLAGDELTDWLLVDGTTAGSYEAESLLTNSDD--DKDGQLSYEEIVK 275
>U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin related
genes protein 3 protein.
Length = 164
Score = 32.3 bits (70), Expect = 0.30
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = -3
Query: 509 FLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAF- 333
F E L+DK+ NG + EL + ALG+ + ++ E+ D D +G + + F
Sbjct: 31 FKEAFLLFDKDGNGTISIKELGVAMRALGQNPTEQQMMEIIHDV--DLDGNGQVEFPEFC 88
Query: 332 --LKKVMA*KTSQLV 294
+K++M S+++
Sbjct: 89 VMMKRIMKETDSEMI 103
>Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical
protein E02A10.3 protein.
Length = 202
Score = 30.7 bits (66), Expect = 0.92
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = -3
Query: 503 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAF 333
EC ++D++ENG + + L LG+ D+ + E+ + D +G+I Y F
Sbjct: 134 ECFTVFDRSENGGISKKDFRFILRELGDITDNQIIDEIFNEA--DVDGNGVIDYDEF 188
>U97405-6|AAB53013.2| 142|Caenorhabditis elegans Hypothetical
protein T09B4.4 protein.
Length = 142
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/73 (23%), Positives = 35/73 (47%)
Frame = -3
Query: 539 ERQRPGSV*RFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDD 360
E+ P + ++ L D+N+ M EL L +GE++ E+ K + +
Sbjct: 72 EQNSPNPLTEIIKALSGLDRNKTRAMPSRELAAILSHVGEQMSPEEI----KYLLSKVEV 127
Query: 359 DGMIPYAAFLKKV 321
+GM+P+ A ++ +
Sbjct: 128 NGMVPHQALIEYI 140
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 148 PRWLRAPPDELSPPRALPAPVPQ 216
P+++ APP SPP P P PQ
Sbjct: 128 PQYIEAPPPPPSPPPPPPPPPPQ 150
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 148 PRWLRAPPDELSPPRALPAPVPQ 216
P W R PP L PP P P PQ
Sbjct: 69 PPWHRRPPWGLPPPPPPPEPEPQ 91
>M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light chain
2 protein.
Length = 170
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/47 (23%), Positives = 26/47 (55%)
Frame = -3
Query: 509 FLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDP 369
F E + D+N++G++ ++L ++G+ DS++ + K+ P
Sbjct: 29 FKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGP 75
>M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light chain
1 protein.
Length = 170
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/47 (23%), Positives = 26/47 (55%)
Frame = -3
Query: 509 FLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDP 369
F E + D+N++G++ ++L ++G+ DS++ + K+ P
Sbjct: 29 FKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGP 75
>AL032644-7|CAA21670.1| 354|Caenorhabditis elegans Hypothetical
protein Y51H1A.7 protein.
Length = 354
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 157 LRAPPDELSPPRALPAPVPQSRASV 231
LRAP +E PP A APVP ++
Sbjct: 211 LRAPLEEEKPPVATMAPVPDEHKAI 235
>AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light
chain protein 1 protein.
Length = 170
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/47 (23%), Positives = 26/47 (55%)
Frame = -3
Query: 509 FLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDP 369
F E + D+N++G++ ++L ++G+ DS++ + K+ P
Sbjct: 29 FKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGP 75
>AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light
chain protein 2 protein.
Length = 170
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/47 (23%), Positives = 26/47 (55%)
Frame = -3
Query: 509 FLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDP 369
F E + D+N++G++ ++L ++G+ DS++ + K+ P
Sbjct: 29 FKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGP 75
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,492,622
Number of Sequences: 27780
Number of extensions: 226363
Number of successful extensions: 775
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 772
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -