Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0298
(401 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 136 2e-31
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 132 2e-30
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 107 8e-23
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 79 3e-14
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 76 3e-13
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 72 5e-12
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 70 2e-11
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 68 8e-11
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 57 1e-07
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 56 3e-07
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 54 1e-06
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 54 1e-06
UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=... 53 2e-06
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 51 7e-06
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 49 3e-05
UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lambl... 44 9e-04
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 44 9e-04
UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=... 44 0.001
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 42 0.006
UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339... 42 0.006
UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4; Methanomicr... 41 0.011
UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiell... 40 0.018
UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1; uncul... 38 0.056
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 38 0.074
UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2; ... 36 0.40
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.40
UniRef50_Q5KM60 Cluster: Ribosomal protein, putative; n=1; Filob... 35 0.69
UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=... 35 0.69
UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, wh... 34 1.2
UniRef50_Q9VFB7 Cluster: Protein TMEM1 homolog; n=3; Diptera|Rep... 33 1.6
UniRef50_Q58J68 Cluster: Mitochondrial SBP40; n=1; Solanum tuber... 33 2.1
UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD470... 33 2.1
UniRef50_Q4FX48 Cluster: Putative uncharacterized protein; n=3; ... 33 2.1
UniRef50_Q6IIA7 Cluster: HDC19174; n=1; Drosophila melanogaster|... 33 2.8
UniRef50_Q67NX8 Cluster: Putative uncharacterized protein; n=1; ... 32 3.7
UniRef50_A1BCK6 Cluster: Putative uncharacterized protein; n=2; ... 32 3.7
UniRef50_Q9NR11 Cluster: Zinc finger protein 302; n=3; Homo sapi... 32 3.7
UniRef50_Q4Q5Q9 Cluster: Protein kinase, putative; n=3; Leishman... 32 4.9
UniRef50_A2DM94 Cluster: Putative uncharacterized protein; n=1; ... 32 4.9
UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=... 32 4.9
UniRef50_Q7NAE7 Cluster: PutA; n=1; Mycoplasma gallisepticum|Rep... 31 6.4
UniRef50_Q1I8G9 Cluster: Putative uncharacterized protein; n=1; ... 31 6.4
UniRef50_Q0LCN2 Cluster: Primosomal protein N'; n=1; Herpetosiph... 31 6.4
UniRef50_Q4Q0U9 Cluster: 60S acidic ribosomal protein, putative;... 31 6.4
UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1; Methan... 31 6.4
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 31 6.4
UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=... 31 6.4
UniRef50_Q5XJU3 Cluster: Zgc:101562; n=2; Danio rerio|Rep: Zgc:1... 31 8.5
UniRef50_Q9RCV7 Cluster: Putative uncharacterized protein SCO085... 31 8.5
UniRef50_Q0HK24 Cluster: Cyclic nucleotide-binding protein; n=18... 31 8.5
UniRef50_Q00U45 Cluster: Regulator of chromosome condensation; n... 31 8.5
UniRef50_Q7RQW8 Cluster: Kinesin-related protein; n=7; Plasmodiu... 31 8.5
UniRef50_Q4PHU5 Cluster: Putative uncharacterized protein; n=1; ... 31 8.5
UniRef50_Q4J7M8 Cluster: Conserved protein; n=6; Archaea|Rep: Co... 31 8.5
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 136 bits (329), Expect = 2e-31
Identities = 70/118 (59%), Positives = 80/118 (67%)
Frame = +2
Query: 47 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 226
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 227 MRKAIKDHLATIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRSKVQAPARPGAIAP 400
MRKAI+ HL R + E +KV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAP 118
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 132 bits (319), Expect = 2e-30
Identities = 68/118 (57%), Positives = 79/118 (66%)
Frame = +2
Query: 47 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 226
M RED+ATWKSNYF+KIIQLLD++PKCFIVGADNVGS+QMQ IR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDFPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTM 60
Query: 227 MRKAIKDHLATIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRSKVQAPARPGAIAP 400
MRKAI+ HL R + E +KV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALERLLPHIRGNVGFVFTKEDLTEVRDLLLANKVPAAARAGAIAP 118
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 107 bits (257), Expect = 8e-23
Identities = 54/118 (45%), Positives = 72/118 (61%)
Frame = +2
Query: 47 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 226
MGREDKA WKSNY ++++ L DEY + +V DNVGS+QMQQIRISLRG + +LMGKNT
Sbjct: 1 MGREDKAAWKSNYVMRLLSLFDEYKRVLLVNVDNVGSKQMQQIRISLRGKATILMGKNTT 60
Query: 227 MRKAIKDHLATIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRSKVQAPARPGAIAP 400
+RKA++ HL + + E + ++V APA+ GAIAP
Sbjct: 61 IRKALRGHLEQNPNLEKVLPHVKGNIGFVFTHEDMVDIREIMLSNQVGAPAKAGAIAP 118
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 79.0 bits (186), Expect = 3e-14
Identities = 50/123 (40%), Positives = 70/123 (56%), Gaps = 5/123 (4%)
Frame = +2
Query: 47 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 226
M + KA K Y K+ QL+DEY + +V ADNVGS Q+Q IR LRG S+VLMGKNTM
Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60
Query: 227 MRKAIKDHLATIQPSRNCCHTSRATLASCSP----AETSLRSVT-NCWRSKVQAPARPGA 391
M+++++ H + S N + L + + L+ V+ + KV APAR G
Sbjct: 61 MKRSVRIH---SENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGL 117
Query: 392 IAP 400
+AP
Sbjct: 118 VAP 120
Score = 39.1 bits (87), Expect = 0.032
Identities = 16/31 (51%), Positives = 24/31 (77%)
Frame = +1
Query: 259 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKL 351
N A+ LLP ++GNVG +FT+GDL EV +++
Sbjct: 74 NTAILNLLPLLQGNVGLIFTKGDLKEVSEEV 104
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 75.8 bits (178), Expect = 3e-13
Identities = 49/118 (41%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
Frame = +2
Query: 62 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI 241
KA K Y K+ QLL+EY + +V ADNVGS Q+Q IR LRG S+VLMGKNTMM++++
Sbjct: 7 KAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSV 66
Query: 242 KDHLATIQPSRNCCHTSRATLASCSP----AETSLRSVT-NCWRSKVQAPARPGAIAP 400
+ H + N S L + + L+ V+ + KV APAR G +AP
Sbjct: 67 RIH---ADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 121
Score = 38.3 bits (85), Expect = 0.056
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = +1
Query: 259 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKL 351
N A LLP ++GNVG +FT+GDL EV +++
Sbjct: 75 NQAFLSLLPLLQGNVGLIFTKGDLKEVSEEV 105
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 71.7 bits (168), Expect = 5e-12
Identities = 41/118 (34%), Positives = 58/118 (49%)
Frame = +2
Query: 47 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 226
+ +E K K Y VK+ +LL+EY + +V DNVGS Q Q IR LRG+ +MGKNT+
Sbjct: 8 LSKEQKKAKKEAYLVKMKKLLEEYKQVVVVKCDNVGSSQFQTIRKELRGTCEFVMGKNTL 67
Query: 227 MRKAIKDHLATIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRSKVQAPARPGAIAP 400
+RKAIK+ T + + + K +PA+ G IAP
Sbjct: 68 IRKAIKNQAETQPELEELLPHIKGNVGFIFTKGDLYQLKAKLTELKAPSPAKAGVIAP 125
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 69.7 bits (163), Expect = 2e-11
Identities = 42/120 (35%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Frame = +2
Query: 47 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 226
M + K K Y K+ L+ +Y K IV DNVGS QM +R SLRG + +LMGKNT
Sbjct: 1 MAKLSKQQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTR 60
Query: 227 MRKAIKDHLATIQPSRNCCHTSRATL--ASCSPAETSLRSVTNCWRSKVQAPARPGAIAP 400
+R A+K +L + + + C + +R++ +S PAR G IAP
Sbjct: 61 IRTALKKNLQAVPQIEKLLPLVKLNMGFVFCKDDLSEIRNIILDNKSS-SHPARLGVIAP 119
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 67.7 bits (158), Expect = 8e-11
Identities = 43/112 (38%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Frame = +2
Query: 74 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHL 253
K + K +L Y K + AD VGS Q+Q+IR S+RG VLMGK TM+RK I+D L
Sbjct: 9 KKLFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRKVIRD-L 67
Query: 254 ATIQPSRNCCHT---SRATLASCSPAETSLRSVTNCWRSKVQAPARPGAIAP 400
A +P + +T + C ++ V N R V APA+ G AP
Sbjct: 68 ADSKPELDALNTYLKQNTCIIFCKDNIAEVKRVINTQR--VGAPAKAGVFAP 117
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 57.2 bits (132), Expect = 1e-07
Identities = 26/35 (74%), Positives = 29/35 (82%)
Frame = +1
Query: 259 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLEKQ 363
N L KLLPHIK VGFVFT+GDLVEVRDKL+E +
Sbjct: 702 NSDLRKLLPHIKSYVGFVFTKGDLVEVRDKLMESK 736
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 55.6 bits (128), Expect = 3e-07
Identities = 25/60 (41%), Positives = 40/60 (66%)
Frame = +2
Query: 74 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHL 253
K +Y+ K+ L++E P+ I A+NVGS+Q+Q +R LR + +L GKNT++R +K L
Sbjct: 3 KYDYWEKLWTLIEEAPRILICEANNVGSKQLQDLRRVLRNKATILFGKNTLIRAGLKHRL 62
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 54.0 bits (124), Expect = 1e-06
Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Frame = +2
Query: 47 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQI-RISLRGSSIVLMGKNT 223
MG+++ K F KI +LL +Y + IVG NVGS+Q+Q I RI + ++++++GKNT
Sbjct: 1 MGKKETKDKKPTQFKKIYELLSKYTQVIIVGLANVGSKQVQDIRRILAKRNALLVIGKNT 60
Query: 224 MMRKAI 241
+ +K +
Sbjct: 61 LFKKVL 66
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 53.6 bits (123), Expect = 1e-06
Identities = 25/62 (40%), Positives = 41/62 (66%)
Frame = +2
Query: 59 DKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKA 238
DK K + + +LL +Y + +NVGS Q+QQIR SL ++I+++GKNT++RKA
Sbjct: 7 DKKAKKDAFIRRFYELLSKYDSIALCTLENVGSLQLQQIRRSLGSNNIMVIGKNTVVRKA 66
Query: 239 IK 244
++
Sbjct: 67 VQ 68
>UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Methanopyrus kandleri
Length = 357
Score = 52.8 bits (121), Expect = 2e-06
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Frame = +2
Query: 50 GREDK-ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR-GSSIVLMGKNT 223
G E K A WK ++ +L+DEY +V + + + Q+Q+IR LR +I+ M +NT
Sbjct: 12 GYEPKVAEWKRREVKELKELMDEYENVGLVDLEGIPAPQLQEIRAKLRERDTIIRMSRNT 71
Query: 224 MMRKAIKDHLATIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRSKVQAPARPGAIAP 400
+MR A+++ L +A + SK APA+PG IAP
Sbjct: 72 LMRIALEEKLDERPELEPLLDYIEGPVAFIFTNLDPFKLYKLLEESKASAPAKPGDIAP 130
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 51.2 bits (117), Expect = 7e-06
Identities = 21/71 (29%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +2
Query: 47 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR-GSSIVLMGKNT 223
M +DK K+ +F ++ + D+Y + +V DN+ ++Q+ R LR +S++LMG+NT
Sbjct: 1 MAGKDKKAKKNEFFERVYNVFDKYTRALLVKCDNISARQIHACRKELRSNNSLMLMGENT 60
Query: 224 MMRKAIKDHLA 256
+++ A++ ++
Sbjct: 61 LIKAALQKRIS 71
Score = 33.1 bits (72), Expect = 2.1
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 262 PALEKLLPHIKGNVGFVFTRGDLVEVRD 345
P +E L+ +KGN+G +FT DL +++D
Sbjct: 91 PHMEPLVRLLKGNLGIIFTNHDLTDIKD 118
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 49.2 bits (112), Expect = 3e-05
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = +2
Query: 62 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI 241
K + Y K+ + L EY K +V DNV S Q+ QIR LRG + +L GKNT++++ I
Sbjct: 9 KQARRQAYVAKLERCLTEYKKIVLVSVDNVRSFQIAQIRRLLRGKAELLAGKNTIIKRVI 68
Score = 34.3 bits (75), Expect = 0.91
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +1
Query: 256 DNPALEKLLPHIKGNVGFVFTRGD 327
D+ L+ LLP+IK NV FVFT GD
Sbjct: 72 DDDKLKNLLPYIKLNVAFVFTNGD 95
>UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_32992_33747 - Giardia lamblia
ATCC 50803
Length = 251
Score = 44.4 bits (100), Expect = 9e-04
Identities = 21/74 (28%), Positives = 41/74 (55%)
Frame = +2
Query: 20 RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS 199
RS L+++ ++ + K +I + D Y +++ + N+ S QQ+R S++G +
Sbjct: 16 RSKTVVLAKVEKKTREA-KQEIIKQIREAFDTYDTVYVIDSHNMTSSSWQQLRTSMKGYA 74
Query: 200 IVLMGKNTMMRKAI 241
+ MGKN +MR A+
Sbjct: 75 RIFMGKNQLMRYAL 88
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 44.4 bits (100), Expect = 9e-04
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Frame = +2
Query: 74 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHL 253
K Y + L +Y + DNV SQQ+ +R LRG ++MGK T+ +K ++
Sbjct: 8 KREYEERFNGCLTKYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKKIVERRA 67
Query: 254 ATIQPSR------NCCHTSRATLASCSPAETS--LRSVTNCW-RSKVQAPARPGAIAP 400
+ S N C + + + T+ + +T + +VQAPAR GAIAP
Sbjct: 68 EDKKASAYDKLLYNTCIEKKLLCGNTALIFTNEEIPVITAVLDKHRVQAPARVGAIAP 125
>UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Halobacteriaceae|Rep: Acidic ribosomal protein P0
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 352
Score = 43.6 bits (98), Expect = 0.001
Identities = 17/64 (26%), Positives = 36/64 (56%)
Frame = +2
Query: 56 EDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRK 235
E+ WK +++ LL+ Y +V + S+Q+Q +R L G + + M +NT++ +
Sbjct: 10 EEVPEWKRQEVAELVDLLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTLLVR 69
Query: 236 AIKD 247
A+++
Sbjct: 70 ALEE 73
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 41.5 bits (93), Expect = 0.006
Identities = 22/67 (32%), Positives = 39/67 (58%)
Frame = +2
Query: 47 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 226
M R+D K + + +L + Y + +V +NV S Q++ I+ G++ +LMGKN+
Sbjct: 25 MTRKDAKERKELTYERARKLFETYSRFALVKIENVVSTQLKDIKRQWGGNAELLMGKNSA 84
Query: 227 MRKAIKD 247
+R+AI D
Sbjct: 85 IRRAIAD 91
>UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339C;
n=5; Saccharomycetales|Rep: Putative uncharacterized
protein YLR339C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 183
Score = 41.5 bits (93), Expect = 0.006
Identities = 36/107 (33%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Frame = -3
Query: 399 GAMAPGRAGAWTLLLQQFVTDLNEVSAG--EHEANVALDVWQQFLEGWIVARWSLMALRI 226
GA AP AGA TLL + +T L V+ + + + L F + + LMAL
Sbjct: 35 GATAPALAGAATLL--ETITFLISVNGSLVKTKPTLPLTKGNNFSKSGKSDKKPLMALLT 92
Query: 225 IVFFPMSTILEPRSEXXXXXXXCEPTLSAPTMKHFGYSSKSWMILTK 85
+VF P+ T P + E TLS PT YSSK + L K
Sbjct: 93 MVFLPIKTTALPLNSFLTSCICWEETLSTPTTNKDLYSSKYSLNLAK 139
>UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4;
Methanomicrobiales|Rep: Ribosomal protein L10 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 346
Score = 40.7 bits (91), Expect = 0.011
Identities = 26/110 (23%), Positives = 54/110 (49%)
Frame = +2
Query: 71 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDH 250
WK + +I + ++E+ +V + + Q+QQIR +LRG++ V M +NT++ A+ +
Sbjct: 11 WKKDEVEEIKRGIEEHTLVGVVDMYGIPASQVQQIRRNLRGTARVKMARNTLIEHALNEL 70
Query: 251 LATIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRSKVQAPARPGAIAP 400
++ + A + + E + ++K + A+PG AP
Sbjct: 71 GGSVATLNDHAEGQSALIFT---NENPFKLFKLLEKTKTKMAAKPGETAP 117
>UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 251
Score = 39.9 bits (89), Expect = 0.018
Identities = 18/53 (33%), Positives = 33/53 (62%)
Frame = +2
Query: 92 KIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDH 250
K I LL+ Y IV +N+ S+Q+ IR LRG+S +++GK + + ++++
Sbjct: 11 KFISLLNSYDTMVIVNMNNIRSKQIHDIRKHLRGTSEIVVGKKSFLSYLLQNN 63
>UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1;
uncultured archaeon|Rep: Acidic ribosomal protein P0 -
uncultured archaeon
Length = 313
Score = 38.3 bits (85), Expect = 0.056
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +2
Query: 71 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKA 238
WK I LL Y + +GS+Q+Q+IR RG +++ + KN+M+ ++
Sbjct: 11 WKEEQVASINSLLGSYDTIGLAKIRGLGSKQLQRIRKEFRGDALLKVSKNSMIARS 66
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 37.9 bits (84), Expect = 0.074
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +2
Query: 74 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSI-VLMGKNTMMRKAI 241
K +Y K+ L +Y K +V + NV + Q+ IR L VL GKN++MR+A+
Sbjct: 11 KLDYVTKLHALFRKYHKVVVVTSMNVTANQLLNIRAGLAEHGCEVLFGKNSLMRRAV 67
>UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 742
Score = 35.5 bits (78), Expect = 0.40
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = +1
Query: 190 WLQYRAHGKKHNDAQSHQRPPGDNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLEK 360
WL R + + ++ H G NP L+P + GNVG + T+GDL EV DK + K
Sbjct: 592 WLPKRLFSQ--HSSRLHAEKTG-NPVFLNLVPLLVGNVGLISTKGDLKEV-DKEVAK 644
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 35.5 bits (78), Expect = 0.40
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +1
Query: 259 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKL 351
NP L+P + GNVG +FT+GDL EV +++
Sbjct: 15 NPVFLNLVPLLVGNVGPIFTKGDLKEVDEEV 45
>UniRef50_Q5KM60 Cluster: Ribosomal protein, putative; n=1;
Filobasidiella neoformans|Rep: Ribosomal protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 245
Score = 34.7 bits (76), Expect = 0.69
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = +2
Query: 11 KFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR 190
K RS TLS+ K +I + +D+Y C++ ++ + ++++R R
Sbjct: 3 KSKRSKLTTLSKTPVRSTKASKQALVNEIRENVDKYDYCWMFSVGDMRNDGLKEVRAQWR 62
Query: 191 GSSIVLMGKNTMMRKAI 241
G+ GK +M KA+
Sbjct: 63 GTGRFFFGKGKVMAKAL 79
>UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Archaeoglobus fulgidus|Rep: Acidic ribosomal protein P0
homolog - Archaeoglobus fulgidus
Length = 339
Score = 34.7 bits (76), Expect = 0.69
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +2
Query: 92 KIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI 241
+I +++ P IV NV + QMQ+IR RG + + + KNT++ +A+
Sbjct: 18 EIKRMISSKPVVAIVSFRNVPAGQMQKIRREFRGKAEIKVVKNTLLERAL 67
>UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 223
Score = 33.9 bits (74), Expect = 1.2
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1
Query: 259 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKL 351
NP L+P + GNVG +FT+GDL E +++
Sbjct: 56 NPVFLNLVPLLVGNVGPIFTKGDLKEADEEV 86
>UniRef50_Q9VFB7 Cluster: Protein TMEM1 homolog; n=3; Diptera|Rep:
Protein TMEM1 homolog - Drosophila melanogaster (Fruit
fly)
Length = 1145
Score = 33.5 bits (73), Expect = 1.6
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 10/78 (12%)
Frame = -3
Query: 396 AMAPGRAGAWTLL----LQQFVTDLNEVSAGEHEANVALDVWQQFLEGWIVARWSLMALR 229
A+ + G W++L L FVT+ N+V + A+D+W + L + V+ W ++ +
Sbjct: 58 ALEKYKQGDWSILEHPILHIFVTECNDVDTYKATIREAIDIWLKTLTSYGVSDWMILLVE 117
Query: 228 II------VFFPMSTILE 193
+ F P +T+L+
Sbjct: 118 TLDMRKTKNFMPRTTVLD 135
>UniRef50_Q58J68 Cluster: Mitochondrial SBP40; n=1; Solanum
tuberosum|Rep: Mitochondrial SBP40 - Solanum tuberosum
(Potato)
Length = 387
Score = 33.1 bits (72), Expect = 2.1
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +2
Query: 101 QLLDEYPKCFIVGADNVGSQQMQQIRISLRGS--SIVLMGKNTMMRKAIKDH 250
+ +DEY CF + A+NV Q + +SL+G+ S+ GKN ++ + H
Sbjct: 166 EFMDEYQSCFHIVAENVNFVQGLKRNVSLKGNVKSVYPKGKNFVLDENDNQH 217
>UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD47064p
- Drosophila melanogaster (Fruit fly)
Length = 256
Score = 33.1 bits (72), Expect = 2.1
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +2
Query: 20 RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS 199
R +L++ R+ A WK I + +YP F+ N+ + ++ +R L+ +S
Sbjct: 6 RDKKVSLTKTDRKGLA-WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNS 64
Query: 200 IVLMGKNTMMR 232
+ GKN +M+
Sbjct: 65 RFIFGKNRVMQ 75
>UniRef50_Q4FX48 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 1522
Score = 33.1 bits (72), Expect = 2.1
Identities = 22/68 (32%), Positives = 29/68 (42%)
Frame = +2
Query: 119 PKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLATIQPSRNCCHTSRA 298
P A S + Q + RG S+ +MGK +MR+A + PS TSR
Sbjct: 315 PSTDSTAAPGTSSSSVAQASLKSRGRSLSVMGKKKVMRRASTGTATSRPPS---AATSRR 371
Query: 299 TLASCSPA 322
SCS A
Sbjct: 372 PSVSCSAA 379
>UniRef50_Q6IIA7 Cluster: HDC19174; n=1; Drosophila
melanogaster|Rep: HDC19174 - Drosophila melanogaster
(Fruit fly)
Length = 158
Score = 32.7 bits (71), Expect = 2.8
Identities = 18/48 (37%), Positives = 20/48 (41%)
Frame = +2
Query: 257 TIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRSKVQAPARPGAIAP 400
T P +C H R T SPA + CW S V PA P AP
Sbjct: 52 TTAPQHHCTHHPRTTEPLLSPARVASWGSQRCWPSPV-PPAPPAPPAP 98
>UniRef50_Q67NX8 Cluster: Putative uncharacterized protein; n=1;
Symbiobacterium thermophilum|Rep: Putative
uncharacterized protein - Symbiobacterium thermophilum
Length = 522
Score = 32.3 bits (70), Expect = 3.7
Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = -3
Query: 381 RAGAWTLLLQQFVTDLNEVSAGEHEANVAL--DVWQQFLEGWIVARWSLMAL 232
+AG WTLL Q V L H V +W F EGW+V LMAL
Sbjct: 32 KAGLWTLLAQAAVAGLAAWRVAAHPPAVPAGEGLWLGFAEGWLVG--LLMAL 81
>UniRef50_A1BCK6 Cluster: Putative uncharacterized protein; n=2;
Chlorobium|Rep: Putative uncharacterized protein -
Chlorobium phaeobacteroides (strain DSM 266)
Length = 908
Score = 32.3 bits (70), Expect = 3.7
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 95 IIQLLDEYPKCFI-VGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLATIQPS 271
+I DE P+ F V A GS + R+ G IV GKNT+M + K+ L IQ
Sbjct: 833 VINPEDEKPQTFSKVMATVTGSWWKDRQRVETIGDVIVRPGKNTLMLRTTKNALPHIQEF 892
Query: 272 R 274
R
Sbjct: 893 R 893
>UniRef50_Q9NR11 Cluster: Zinc finger protein 302; n=3; Homo
sapiens|Rep: Zinc finger protein 302 - Homo sapiens
(Human)
Length = 478
Score = 32.3 bits (70), Expect = 3.7
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -1
Query: 377 LELGLCFSNSLSRTSTRSPRVNTKPTLPLMCGNSFSRAGL 258
+E G FS+ S T+ +S KP + CG SFSR L
Sbjct: 339 IECGKAFSHGSSLTNHQSTHTGEKPYECMNCGKSFSRVSL 378
>UniRef50_Q4Q5Q9 Cluster: Protein kinase, putative; n=3;
Leishmania|Rep: Protein kinase, putative - Leishmania
major
Length = 1349
Score = 31.9 bits (69), Expect = 4.9
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +2
Query: 272 RNCCHTSRATLASCSPAETSLRSVTNCWRSKVQ--APARPGAIA 397
R H+SRA + C+P + +LR++ RSKVQ APA P + A
Sbjct: 896 RTAAHSSRAQASPCTPVKEALRALR---RSKVQAGAPAPPPSSA 936
>UniRef50_A2DM94 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1217
Score = 31.9 bits (69), Expect = 4.9
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Frame = +2
Query: 248 HLATIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRSK----VQAPARPGAIAP 400
H+A + NC HT+RA + C E + + + + K ++ P G I P
Sbjct: 1137 HVAWVSKQTNCVHTTRAIIRDCKNREEARQKILKYLKDKKVDFIEIPNAEGEIQP 1191
>UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Sulfolobaceae|Rep: Acidic ribosomal protein P0 homolog -
Sulfolobus solfataricus
Length = 338
Score = 31.9 bits (69), Expect = 4.9
Identities = 15/61 (24%), Positives = 31/61 (50%)
Frame = +2
Query: 65 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIK 244
A+WK ++ +L+ I + + ++ +IR LRG + + + KNT+ + A K
Sbjct: 14 ASWKLEEVKELTELIKNSNTILIGNLEGFPADKLHEIRKKLRGKATIKVTKNTLFKIAAK 73
Query: 245 D 247
+
Sbjct: 74 N 74
>UniRef50_Q7NAE7 Cluster: PutA; n=1; Mycoplasma gallisepticum|Rep:
PutA - Mycoplasma gallisepticum
Length = 476
Score = 31.5 bits (68), Expect = 6.4
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 7/54 (12%)
Frame = +2
Query: 113 EYPKCFIVGADNVGSQQMQQ-------IRISLRGSSIVLMGKNTMMRKAIKDHL 253
+Y F G+ NVG + MQQ + + L G S ++ NT + KA+K L
Sbjct: 203 KYDHIFFTGSSNVGKKVMQQAATHLTPVTLELGGKSPCIVDTNTDLEKAVKSFL 256
>UniRef50_Q1I8G9 Cluster: Putative uncharacterized protein; n=1;
Pseudomonas entomophila L48|Rep: Putative
uncharacterized protein - Pseudomonas entomophila
(strain L48)
Length = 675
Score = 31.5 bits (68), Expect = 6.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 181 LATWLQYRAHGKKHNDAQSHQRPPGDNPALEKLL 282
L WL Y+ ++H H PP + PAL ++L
Sbjct: 66 LKQWLAYQVFLQQHEAHAEHATPPAERPALNQIL 99
>UniRef50_Q0LCN2 Cluster: Primosomal protein N'; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Primosomal protein N' -
Herpetosiphon aurantiacus ATCC 23779
Length = 829
Score = 31.5 bits (68), Expect = 6.4
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +2
Query: 53 REDKATWKSNYFVKIIQL--LDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 226
+E + TW+ + I+L LDE + + VG Q +Q+R+ LRGS L T
Sbjct: 108 QEIERTWRPTEHGQKIELGTLDERERAILFHLRRVGEQSERQLRVDLRGSDADLRRSYTE 167
Query: 227 MRK 235
+ +
Sbjct: 168 LHE 170
>UniRef50_Q4Q0U9 Cluster: 60S acidic ribosomal protein, putative;
n=5; Trypanosomatidae|Rep: 60S acidic ribosomal protein,
putative - Leishmania major
Length = 227
Score = 31.5 bits (68), Expect = 6.4
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +2
Query: 74 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI 241
K +I + L++Y + N+ + +QQIR G S + +G N +M AI
Sbjct: 23 KDKLIERIREALEDYSDVYTFQLHNIRTNILQQIREERAGDSRIFLGNNKVMMIAI 78
>UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 50S ribosomal
protein L10P - Methanosphaera stadtmanae (strain DSM
3091)
Length = 332
Score = 31.5 bits (68), Expect = 6.4
Identities = 24/112 (21%), Positives = 49/112 (43%)
Frame = +2
Query: 65 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIK 244
A WK ++ L + + IV ++ ++Q+Q +R SL ++I+ M + ++ A++
Sbjct: 5 ADWKKEKVAELEDLTNSHEIIGIVNLADIPAKQLQTMRKSLGDNAILKMSRKNFIKIALE 64
Query: 245 DHLATIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRSKVQAPARPGAIAP 400
+ + + A + SK +APA+ G+IAP
Sbjct: 65 N--SDKEEVEGLADYLEGQPAMVFTKMNPFKLFKILEDSKTEAPAKAGSIAP 114
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 31.5 bits (68), Expect = 6.4
Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 65 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR-GSSIVLMGKNTMMRKAI 241
A WK ++ +L+ YP +V ++ + + Q+R +R ++ + +NT++ AI
Sbjct: 5 AEWKKKEVEELAKLIKSYPVIALVDVSSMPAYPLSQMRRLIRENGGLLRVSRNTLIELAI 64
Query: 242 K 244
K
Sbjct: 65 K 65
>UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Methanococcus|Rep: Acidic ribosomal protein P0 homolog -
Methanococcus vannielii
Length = 336
Score = 31.5 bits (68), Expect = 6.4
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = +2
Query: 65 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIK 244
A WK + +LL ++ V + Q+Q+IR +R + M +NT++++A++
Sbjct: 11 APWKIEEVNALKELLKSANVIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNTLIKRAVE 70
Query: 245 D 247
+
Sbjct: 71 E 71
>UniRef50_Q5XJU3 Cluster: Zgc:101562; n=2; Danio rerio|Rep:
Zgc:101562 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 223
Score = 31.1 bits (67), Expect = 8.5
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -1
Query: 386 QDELELGLCFSNSLSRTSTRSPRVNTKPTLPLMCGNSFSRA 264
+DE L + + S R+PR TKP CGNSFS A
Sbjct: 19 EDEEVLSMFHKEKAEKKSRRTPR-GTKPYYCTQCGNSFSVA 58
>UniRef50_Q9RCV7 Cluster: Putative uncharacterized protein SCO0854;
n=3; Streptomyces|Rep: Putative uncharacterized protein
SCO0854 - Streptomyces coelicolor
Length = 863
Score = 31.1 bits (67), Expect = 8.5
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = -3
Query: 318 GEHEANVALDVWQQFLEGWIVARWSLMALRIIVFFPMSTILEPRSE 181
G+ A VA D+WQQF G V W L R ++ +E
Sbjct: 724 GDDLAMVAADLWQQFTSGGRVTLWDLSVWRAAALSSQVAVVSREAE 769
>UniRef50_Q0HK24 Cluster: Cyclic nucleotide-binding protein; n=18;
Alteromonadales|Rep: Cyclic nucleotide-binding protein -
Shewanella sp. (strain MR-4)
Length = 620
Score = 31.1 bits (67), Expect = 8.5
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -3
Query: 300 VALDVWQQFLEGWIVARWSLMALRIIVFFPMSTILEPRS 184
++L WQQ E W+V + +FF M ++ P+S
Sbjct: 417 MSLKAWQQVFEKWVVTPEPKALMHASIFFDMRSVFGPQS 455
>UniRef50_Q00U45 Cluster: Regulator of chromosome condensation; n=1;
Ostreococcus tauri|Rep: Regulator of chromosome
condensation - Ostreococcus tauri
Length = 360
Score = 31.1 bits (67), Expect = 8.5
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -1
Query: 356 SNSLSRTSTRSPRVNTKPTLPLMCGNSFSRAGLSP 252
S+S+ RT +RSP ++PT PL +R+ SP
Sbjct: 220 SSSIPRTRSRSPHSRSRPTRPLSAPRRTNRSSPSP 254
>UniRef50_Q7RQW8 Cluster: Kinesin-related protein; n=7; Plasmodium
(Vinckeia)|Rep: Kinesin-related protein - Plasmodium
yoelii yoelii
Length = 1351
Score = 31.1 bits (67), Expect = 8.5
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 155 SQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLATIQPSRNCCHTSRATL 304
++ + ++R+ R S + + KN++ + +A I PSR C S TL
Sbjct: 712 NRNLAKVRVKYRDSKLTHLLKNSLEGNCLVVMIANINPSRKCFQESNNTL 761
>UniRef50_Q4PHU5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 315
Score = 31.1 bits (67), Expect = 8.5
Identities = 19/74 (25%), Positives = 39/74 (52%)
Frame = +2
Query: 20 RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS 199
R+ +L+R ++ K K+N K+ EYP +I+G ++ + ++++R +GS
Sbjct: 6 RAKVVSLTRTDKKTKED-KANLIDKVRDAAQEYPYVWILGHHSMRNNYLKEVRDLWKGSK 64
Query: 200 IVLMGKNTMMRKAI 241
I GK ++ A+
Sbjct: 65 I-FFGKLKVLALAL 77
>UniRef50_Q4J7M8 Cluster: Conserved protein; n=6; Archaea|Rep:
Conserved protein - Sulfolobus acidocaldarius
Length = 236
Score = 31.1 bits (67), Expect = 8.5
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 140 ADNVGSQQMQQIRISLRGSSIVLMGK--NTMMRKAIKDHLATIQPSRNC 280
AD++G + R+S ++ MGK N M RK +L+ IQP C
Sbjct: 134 ADDIGEVVKEMARVSRNCVGVIAMGKSDNVMYRKYASFYLSYIQPYLAC 182
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 454,461,639
Number of Sequences: 1657284
Number of extensions: 8938106
Number of successful extensions: 27580
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 26728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27561
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17349842203
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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