Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0298
         (401 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   0.85 
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    22   2.6  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   3.4  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   4.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.0  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   6.0  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    20   7.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 0.85
 Identities = 12/50 (24%), Positives = 20/50 (40%)
 Frame = +2

Query: 113  EYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLATI 262
            EYPKC+ V  +       +     +R  S     KN ++  A+    A +
Sbjct: 2443 EYPKCWQVDCNKGPDSDKEAFAAFVRELSAAFKPKNLLLSAAVSPSKAVM 2492


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
           acetylcholinesterase protein.
          Length = 50

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +1

Query: 178 YLATWLQYRAHGKKHNDAQSHQRP 249
           YL  W+  R   + H D    +RP
Sbjct: 15  YLNIWVPQRLRIRHHGDKPPQERP 38


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 80  NYFVKIIQLLDEYPKCF 130
           N   KI  L+DE+ +CF
Sbjct: 214 NLHNKICNLIDEFNECF 230


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 314 NTKPTLPLMCGNSFSR 267
           N KP +  +CG S++R
Sbjct: 246 NQKPNVCRICGKSYAR 261


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
 Frame = +2

Query: 122  KCFIVG--ADNVGSQQMQQIRISLR 190
            KC I    ADN  ++Q+++I+ SLR
Sbjct: 1086 KCMICTYKADNKENEQLRKIQESLR 1110


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
 Frame = +2

Query: 122  KCFIVG--ADNVGSQQMQQIRISLR 190
            KC I    ADN  ++Q+++I+ SLR
Sbjct: 1086 KCMICTYKADNKENEQLRKIQESLR 1110


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 9/28 (32%), Positives = 11/28 (39%)
 Frame = +1

Query: 184 ATWLQYRAHGKKHNDAQSHQRPPGDNPA 267
           +TW  Y A+         HQ  P   PA
Sbjct: 145 STWCNYSAYSSASRHHVDHQPVPYLTPA 172


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 20.2 bits (40), Expect = 7.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 157 ATDAADPYLATWLQYR 204
           ATD    Y+A+W  YR
Sbjct: 22  ATDKVICYVASWAIYR 37


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,133
Number of Sequences: 336
Number of extensions: 2090
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8646818
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)