Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0298
         (401 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    25   1.4  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    24   1.8  
AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    24   1.8  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   2.4  
AY255857-1|AAP13483.1|  216|Anopheles gambiae glutathione tranfe...    22   7.3  
AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.         22   7.3  

>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +1

Query: 151 GLATDAADPYLATWLQYRAHGKKHNDAQSHQRPPGDNP 264
           G ATD  +  LA   Q + H  +H   Q HQ+    +P
Sbjct: 293 GSATDNNNYILAQQQQQQHHHHQHQPQQQHQQQYHSHP 330


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -1

Query: 371 LGLCFSNSLSRTSTRSPRVNTKPTLPLMCGNSFSRAGLS 255
           LGLC +N  +RT+T   R N    +   CG  F   G++
Sbjct: 173 LGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYFKLHGVN 211


>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -2

Query: 352 TVCHGPQRGLRG*TRSQRCP*CVATVSRGLDCRQVVFDGFAH 227
           T+C G   G+    ++Q C  C A V  GL+C Q   + FA+
Sbjct: 12  TLC-GEVTGVSYRGQAQTCRNCAAPVHHGLNCVQNRQNRFAN 52


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 250 PGDNPALEKLLPHIKGNVGFVFTRGD 327
           PG +    K  P +KGNVG+   +GD
Sbjct: 723 PGRHGQTVKGEPGLKGNVGYSGDKGD 748


>AY255857-1|AAP13483.1|  216|Anopheles gambiae glutathione
           tranferase d9 protein.
          Length = 216

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 2   VVLKFHRSPYATLSR 46
           VVLKF  +PYA + R
Sbjct: 168 VVLKFELAPYAAVRR 182


>AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.
          Length = 93

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
 Frame = +3

Query: 252 WR--QSSPRETVATHQGQRWLR 311
           WR  ++SP   + T +G+RW R
Sbjct: 7   WRCARASPSRPILTTRGRRWPR 28


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 455,691
Number of Sequences: 2352
Number of extensions: 8125
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32067225
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)