Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0296
         (714 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D57947 Cluster: PREDICTED: hypothetical protein;...    87   3e-16
UniRef50_UPI00006A2901 Cluster: UPI00006A2901 related cluster; n...    84   4e-15
UniRef50_Q7QQI2 Cluster: GLP_748_1200_211; n=1; Giardia lamblia ...    81   2e-14
UniRef50_A5PLD0 Cluster: Zgc:165536 protein; n=12; Fungi/Metazoa...    78   2e-13
UniRef50_Q9AVH2 Cluster: Putative senescence-associated protein;...    74   4e-12
UniRef50_Q7RN96 Cluster: Putative senescence-associated protein;...    69   1e-10
UniRef50_O04892 Cluster: Cytochrome P450 like_TBP; n=10; Eukaryo...    65   1e-09
UniRef50_Q4P3R9 Cluster: Putative uncharacterized protein; n=3; ...    53   8e-06
UniRef50_A5AX63 Cluster: Putative uncharacterized protein; n=1; ...    52   1e-05
UniRef50_Q7YT64 Cluster: Tyrosine-protein kinase receptor; n=1; ...    44   0.005
UniRef50_O57960 Cluster: Putative uncharacterized protein PH0221...    41   0.026
UniRef50_Q6L6Z5 Cluster: RRNA intron-encoded endonuclease; n=3; ...    40   0.046
UniRef50_Q4HL63 Cluster: Lipoprotein, putative; n=11; Bacteria|R...    38   0.32 
UniRef50_A6SB47 Cluster: Putative uncharacterized protein; n=1; ...    37   0.43 
UniRef50_A4VF71 Cluster: Putative uncharacterized protein; n=1; ...    34   4.0  
UniRef50_Q7QW44 Cluster: GLP_457_25625_26368; n=2; Giardia intes...    33   9.2  

>UniRef50_UPI0000D57947 Cluster: PREDICTED: hypothetical protein;
           n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical
           protein - Tribolium castaneum
          Length = 70

 Score = 87.4 bits (207), Expect = 3e-16
 Identities = 43/58 (74%), Positives = 44/58 (75%)
 Frame = -2

Query: 587 SPTYATPLMSPYNARLESSSTGSSFPVILPSPFPWLWFR*IVDRDSGNLVNPFMRVTN 414
           SPTYATPLMSPYNARLESSSTGSSFP     P P       + RDSGNLVNPFMRVTN
Sbjct: 13  SPTYATPLMSPYNARLESSSTGSSFPANFSKPVPLAVVSLDMGRDSGNLVNPFMRVTN 70


>UniRef50_UPI00006A2901 Cluster: UPI00006A2901 related cluster; n=1;
           Xenopus tropicalis|Rep: UPI00006A2901 UniRef100 entry -
           Xenopus tropicalis
          Length = 154

 Score = 83.8 bits (198), Expect = 4e-15
 Identities = 37/40 (92%), Positives = 39/40 (97%)
 Frame = -1

Query: 411 DDEAFGYLKRVIVTPAVYPRLLEFLHVDIQSTGQKSHCVN 292
           +DEAFGYLKRVIVTPAVYPRL+EFLH DIQSTGQKSHCVN
Sbjct: 113 NDEAFGYLKRVIVTPAVYPRLVEFLHFDIQSTGQKSHCVN 152


>UniRef50_Q7QQI2 Cluster: GLP_748_1200_211; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_748_1200_211 - Giardia lamblia ATCC
           50803
          Length = 329

 Score = 81.4 bits (192), Expect = 2e-14
 Identities = 46/84 (54%), Positives = 51/84 (60%)
 Frame = -1

Query: 513 PRDSPKPVPLAVVSLDSR*GQWESR*SIHARH*LDDEAFGYLKRVIVTPAVYPRLLEFLH 334
           P   P PVP A  S     GQW+ R SIHAR  L DEAFGYLKRVIVTPAVY      LH
Sbjct: 188 PAGRPSPVPEAGGSRRRGSGQWDPRWSIHARRKLPDEAFGYLKRVIVTPAVYQGFGGSLH 247

Query: 333 VDIQSTGQKSHCVNTREGHRNALF 262
            D + TGQKS   +   G R+A+F
Sbjct: 248 SDGRGTGQKSRRASAGCGPRDAVF 271


>UniRef50_A5PLD0 Cluster: Zgc:165536 protein; n=12; Fungi/Metazoa
           group|Rep: Zgc:165536 protein - Danio rerio (Zebrafish)
           (Brachydanio rerio)
          Length = 55

 Score = 78.2 bits (184), Expect = 2e-13
 Identities = 32/36 (88%), Positives = 34/36 (94%)
 Frame = +3

Query: 399 MPRHLISDAHEWINEIPTVPIYYLAKPQPRERAWEN 506
           MPRHLISDAHEW+NEIPTVP  YLAKPQPRERAW+N
Sbjct: 1   MPRHLISDAHEWMNEIPTVPTCYLAKPQPRERAWQN 36



 Score = 41.9 bits (94), Expect = 0.015
 Identities = 17/18 (94%), Positives = 18/18 (100%)
 Frame = +2

Query: 509 RGKKTLLSLTLVWHCKET 562
           RGKKTLLSLTLVWHC+ET
Sbjct: 38  RGKKTLLSLTLVWHCEET 55


>UniRef50_Q9AVH2 Cluster: Putative senescence-associated protein;
           n=4; Eukaryota|Rep: Putative senescence-associated
           protein - Pisum sativum (Garden pea)
          Length = 282

 Score = 73.7 bits (173), Expect = 4e-12
 Identities = 36/49 (73%), Positives = 38/49 (77%)
 Frame = -1

Query: 585 SHLCYTSHVSLQCQTRVKLNRVFFPRDSPKPVPLAVVSLDSR*GQWESR 439
           SHL YTS V  Q +TRVKLNRVFFP DS K VPL +VSLDSR GQWE R
Sbjct: 234 SHLSYTSQVISQSRTRVKLNRVFFPADSAKAVPLLLVSLDSRKGQWEFR 282


>UniRef50_Q7RN96 Cluster: Putative senescence-associated protein;
           n=3; Eukaryota|Rep: Putative senescence-associated
           protein - Plasmodium yoelii yoelii
          Length = 205

 Score = 68.9 bits (161), Expect = 1e-10
 Identities = 32/43 (74%), Positives = 33/43 (76%)
 Frame = -1

Query: 408 DEAFGYLKRVIVTPAVYPRLLEFLHVDIQSTGQKSHCVNTREG 280
           DE FGYLKRVIVTPAVY   +EF  VDI  TGQKSHCVNT  G
Sbjct: 144 DETFGYLKRVIVTPAVYLCFIEFHQVDIHGTGQKSHCVNTISG 186



 Score = 44.4 bits (100), Expect = 0.003
 Identities = 29/82 (35%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
 Frame = -2

Query: 467 IVDRDSGNLVNPFMRVTN*MTRHLATLRES*LLPPFTRACLNFFTLTFRALG-RNHIAST 291
           I  RDS NLVNPFM VTN        L+   + P      + F  +     G ++H  +T
Sbjct: 125 IASRDSENLVNPFMHVTN-YDETFGYLKRVIVTPAVYLCFIEFHQVDIHGTGQKSHCVNT 183

Query: 290 PARAIAMLCFN*QSDSPCPCQF 225
            +          QSDSPCP QF
Sbjct: 184 ISGFSQCYVLIKQSDSPCPFQF 205


>UniRef50_O04892 Cluster: Cytochrome P450 like_TBP; n=10;
           Eukaryota|Rep: Cytochrome P450 like_TBP - Nicotiana
           tabacum (Common tobacco)
          Length = 530

 Score = 65.3 bits (152), Expect = 1e-09
 Identities = 42/93 (45%), Positives = 52/93 (55%)
 Frame = -2

Query: 587 SPTYATPLMSPYNARLESSSTGSSFPVILPSPFPWLWFR*IVDRDSGNLVNPFMRVTN*M 408
           +PTY TPL S +   LESSSTGSSFP     P P +       +DSG  ++    VTN M
Sbjct: 54  APTYTTPLKSFHKVGLESSSTGSSFPADSAKPVPLVVVSLDSRQDSGISLS-IHAVTNKM 112

Query: 407 TRHLATLRES*LLPPFTRACLNFFTLTFRALGR 309
           TRHLATLRES   P + R  + F     ++ GR
Sbjct: 113 TRHLATLRESCYSPVYPR-LVEFLHFDIQSTGR 144



 Score = 34.3 bits (75), Expect = 3.0
 Identities = 21/50 (42%), Positives = 23/50 (46%)
 Frame = -3

Query: 307 ITLRQHPRGPSQCFVLISSRIPLVRASSELTVERRSYRIVGIAHETKPTR 158
           ITLR   R        ++SRIPLVR SSEL V R      G      P R
Sbjct: 145 ITLRNIRRDHRNALFKLNSRIPLVRTSSELAVRRPGKAPEGTVPSPSPGR 194


>UniRef50_Q4P3R9 Cluster: Putative uncharacterized protein; n=3;
           Dikarya|Rep: Putative uncharacterized protein - Ustilago
           maydis (Smut fungus)
          Length = 160

 Score = 52.8 bits (121), Expect = 8e-06
 Identities = 27/43 (62%), Positives = 30/43 (69%)
 Frame = -1

Query: 642 VSNETMKVVVFQRRSRETISHLCYTSHVSLQCQTRVKLNRVFF 514
           +S ETM+VVVF RR     SHL YT HVS QCQTRVKLN   +
Sbjct: 101 ISKETMEVVVFHRRRS---SHLFYTLHVSSQCQTRVKLNHAAY 140


>UniRef50_A5AX63 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 421

 Score = 52.4 bits (120), Expect = 1e-05
 Identities = 32/75 (42%), Positives = 42/75 (56%)
 Frame = +3

Query: 255 LIKTKHCDGPRGC*RNVISAQCSECQREEIQASAGKRRE*L*LS*GSQMPRHLISDAHEW 434
           L K K+C+GP GC RNVIS+Q    +  +++ S                  HLISDAHEW
Sbjct: 368 LAKIKNCNGPCGCSRNVISSQ----RNVKVKKS-----------------NHLISDAHEW 406

Query: 435 INEIPTVPIYYLAKP 479
           IN+ PT+ +YY  KP
Sbjct: 407 INKNPTILVYYPTKP 421


>UniRef50_Q7YT64 Cluster: Tyrosine-protein kinase receptor; n=1;
           Crassostrea gigas|Rep: Tyrosine-protein kinase receptor
           - Crassostrea gigas (Pacific oyster) (Crassostrea
           angulata)
          Length = 804

 Score = 43.6 bits (98), Expect = 0.005
 Identities = 20/25 (80%), Positives = 21/25 (84%)
 Frame = +3

Query: 297 RNVISAQCSECQREEIQASAGKRRE 371
           RNVISAQCSECQ EEIQ+S GK  E
Sbjct: 1   RNVISAQCSECQSEEIQSSEGKGGE 25


>UniRef50_O57960 Cluster: Putative uncharacterized protein PH0221;
           n=2; Pyrococcus|Rep: Putative uncharacterized protein
           PH0221 - Pyrococcus horikoshii
          Length = 235

 Score = 41.1 bits (92), Expect = 0.026
 Identities = 26/52 (50%), Positives = 28/52 (53%)
 Frame = -1

Query: 513 PRDSPKPVPLAVVSLDSR*GQWESR*SIHARH*LDDEAFGYLKRVIVTPAVY 358
           P   P     A VS     GQ   R +IHA   L D+ F YLKRVIVTPAVY
Sbjct: 6   PTGGPWHARQAEVSPGPGRGQRGPRYAIHAGRHLTDKEFRYLKRVIVTPAVY 57


>UniRef50_Q6L6Z5 Cluster: RRNA intron-encoded endonuclease; n=3;
           Thermoproteaceae|Rep: RRNA intron-encoded endonuclease -
           Thermoproteus sp. IC-061
          Length = 234

 Score = 40.3 bits (90), Expect = 0.046
 Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +3

Query: 417 SDAHEWINEIPTVPIYYLAKPQPRERAWE-NHGER 518
           S  HEWINE+PTVP    A P P  ++W+   GE+
Sbjct: 177 SGVHEWINEVPTVPARGPANPPPGAQSWDPRRGEK 211


>UniRef50_Q4HL63 Cluster: Lipoprotein, putative; n=11; Bacteria|Rep:
           Lipoprotein, putative - Campylobacter lari RM2100
          Length = 97

 Score = 37.5 bits (83), Expect = 0.32
 Identities = 21/40 (52%), Positives = 25/40 (62%)
 Frame = -1

Query: 477 VSLDSR*GQWESR*SIHARH*LDDEAFGYLKRVIVTPAVY 358
           +SLD    Q  SR +IHA   L D+ F YL+ VIVT AVY
Sbjct: 50  ISLDPSLRQLPSRYAIHAGRYLTDKEFRYLRTVIVTAAVY 89


>UniRef50_A6SB47 Cluster: Putative uncharacterized protein; n=1;
           Botryotinia fuckeliana B05.10|Rep: Putative
           uncharacterized protein - Botryotinia fuckeliana B05.10
          Length = 1027

 Score = 37.1 bits (82), Expect = 0.43
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -2

Query: 590 RSPTYATPLMSPYNARLESSSTGSSFPVILPSPFPWL 480
           RSP  + P    +NA  E  S G +FPV+  SP PW+
Sbjct: 195 RSPPGSGPTHYDFNALFEQQSPGGNFPVMQSSPSPWI 231


>UniRef50_A4VF71 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 70

 Score = 33.9 bits (74), Expect = 4.0
 Identities = 16/22 (72%), Positives = 17/22 (77%)
 Frame = -1

Query: 516 FPRDSPKPVPLAVVSLDSR*GQ 451
           FP D  KPVPLA+ SLDSR GQ
Sbjct: 32  FPADYSKPVPLAMGSLDSRQGQ 53


>UniRef50_Q7QW44 Cluster: GLP_457_25625_26368; n=2; Giardia
           intestinalis|Rep: GLP_457_25625_26368 - Giardia lamblia
           ATCC 50803
          Length = 247

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 19/48 (39%), Positives = 24/48 (50%)
 Frame = -2

Query: 221 ADR*TAVVQNRGDRARNETDTTLRLGRSAEGRRTRVRIQSET*DDFRE 78
           ADR      N      NET   +  GR A+GRR   R++SE  D FR+
Sbjct: 55  ADRLVDTANNTFIHEINETSACMICGRIADGRRVIDRVRSEAVDFFRK 102


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 728,813,744
Number of Sequences: 1657284
Number of extensions: 15362833
Number of successful extensions: 36263
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 35003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36246
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57438021881
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)