Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0296
         (714 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    25   0.81 
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   7.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.5  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    21   9.9  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = +3

Query: 432 WINEIPTVPI 461
           W+NEIPT+P+
Sbjct: 321 WLNEIPTMPV 330


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 57  LYIFNMTLAKIVLRFGLDPDPRSP 128
           L +  + LA +V  F  DP  R+P
Sbjct: 444 LLVSKVALASVVKDFVFDPTERTP 467


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 206  AVVQNRGDRARNETDT 159
            AV +  GD + NETD+
Sbjct: 1180 AVTEEGGDESANETDS 1195


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 206  AVVQNRGDRARNETDT 159
            AV +  GD + NETD+
Sbjct: 1180 AVTEEGGDESANETDS 1195


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 206  AVVQNRGDRARNETDT 159
            AV +  GD + NETD+
Sbjct: 1180 AVTEEGGDESANETDS 1195


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 206  AVVQNRGDRARNETDT 159
            AV +  GD + NETD+
Sbjct: 1180 AVTEEGGDESANETDS 1195


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 405 RHLISDAHEWINEI 446
           RHLI    +W NE+
Sbjct: 91  RHLIDHKRDWWNEL 104


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,278
Number of Sequences: 336
Number of extensions: 3688
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)