Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0296
         (714 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    25   3.1  
AJ697721-1|CAG26914.1|  135|Anopheles gambiae putative odorant-b...    24   5.4  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           24   5.4  
AJ297932-1|CAC35452.1|   90|Anopheles gambiae gSG1a protein prot...    23   9.5  

>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = -2

Query: 605 DDRAKRSPTYATPLMSPYNARLESSSTGSSFPVILPSPFPWLWFR 471
           +D  K SP +  PL+S           G SFP+  P+ +P  W R
Sbjct: 331 NDYFKGSPAHRKPLLS----------MGISFPIFFPTYWPHYWNR 365


>AJ697721-1|CAG26914.1|  135|Anopheles gambiae putative
           odorant-binding protein OBPjj11 protein.
          Length = 135

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +3

Query: 216 VSSELARTRGIRLLIKTKHCDGPRGC*RNVISAQC 320
           ++SE  + +   L+ + ++ DGP  C R+    QC
Sbjct: 91  LASEYGQEKADELVARCRNNDGPDACERSFRLLQC 125


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = -1

Query: 408 DEAFGYLKRVIVTPAVYPRLLEFLHV-DIQSTGQKSHC 298
           D +F  L RV  TPA  P  +EFL + D      + HC
Sbjct: 635 DASFNRLTRV--TPATIPNSIEFLFLNDNHIVHVEPHC 670


>AJ297932-1|CAC35452.1|   90|Anopheles gambiae gSG1a protein
           protein.
          Length = 90

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
 Frame = -1

Query: 207 GGRTESWGS---RTKRNRHDLTARKIRGRPENAGPDPVR 100
           GG   +W S   R ++ RH+LT    R     A PD  R
Sbjct: 47  GGCAAAWDSLLSRLEQMRHNLTGCSERETTNPAPPDDTR 85


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 751,613
Number of Sequences: 2352
Number of extensions: 16325
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)